RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 MUC2Q02817 5179 aa9.46□□□□□ -0.89
HMG20B-215ENST00000585741 IGHV6-1A0A0B4J1U7 121 aa9.43□□□□□ -0.9
HMG20B-215ENST00000585741 A8MWP4 228 aa9.43□□□□□ -0.9
HMG20B-215ENST00000585741 ATP5EP2Q5VTU8 51 aa9.41□□□□□ -0.9
HMG20B-215ENST00000585741 LINC00643Q86TS7 51 aa9.41□□□□□ -0.9
HMG20B-215ENST00000585741 A0A1B0GVX0 72 aa9.4□□□□□ -0.9
HMG20B-215ENST00000585741 C9orf92A6NGG3 77 aa9.4□□□□□ -0.9
HMG20B-215ENST00000585741 CXCL6P80162 114 aa9.4□□□□□ -0.9
HMG20B-215ENST00000585741 IGKV3D-7A0A0C4DH55 119 aa9.39□□□□□ -0.91
HMG20B-215ENST00000585741 DSCR10P59022 87 aa9.38□□□□□ -0.91
HMG20B-215ENST00000585741 C8orf87E5RJ46 101 aa9.37□□□□□ -0.91
HMG20B-215ENST00000585741 LINC00313P59037 77 aa9.37□□□□□ -0.91
HMG20B-215ENST00000585741 TPRXLQ17RH7 258 aa9.37□□□□□ -0.91
HMG20B-215ENST00000585741 PRR15Q8IV56 129 aa9.37□□□□□ -0.91
HMG20B-215ENST00000585741 K7EQZ3 153 aa9.36□□□□□ -0.91
HMG20B-215ENST00000585741 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
HMG20B-215ENST00000585741 KRTAP13-3Q3SY46 172 aa9.34□□□□□ -0.91
HMG20B-215ENST00000585741 Q8N9L7 120 aa9.34□□□□□ -0.91
HMG20B-215ENST00000585741 HIST1H4AP62805 103 aaKnown RBP9.32□□□□□ -0.92
HMG20B-215ENST00000585741 C8orf17Q9NRJ1 99 aa9.32□□□□□ -0.92
HMG20B-215ENST00000585741 FAT4Q6V0I7 4981 aa9.27□□□□□ -0.93
HMG20B-215ENST00000585741 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
HMG20B-215ENST00000585741 hDV103S1A0JD37 113 aa9.25□□□□□ -0.93
HMG20B-215ENST00000585741 HCG22E2RYF7 251 aa9.25□□□□□ -0.93
HMG20B-215ENST00000585741 WFDC13Q8IUB5 93 aa9.25□□□□□ -0.93
HMG20B-215ENST00000585741 MMP24-AS1A0A0U1RRL7 71 aa9.24□□□□□ -0.93
HMG20B-215ENST00000585741 CASC2Q6XLA1 102 aa9.24□□□□□ -0.93
HMG20B-215ENST00000585741 KRTAP9-2Q9BYQ4 174 aa9.24□□□□□ -0.93
HMG20B-215ENST00000585741 XP32Q5T750 250 aa9.23□□□□□ -0.93
HMG20B-215ENST00000585741 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
HMG20B-215ENST00000585741 MRPL34Q9BQ48 92 aaKnown RBP9.21□□□□□ -0.94
HMG20B-215ENST00000585741 NDUFS5O43920 106 aa9.2□□□□□ -0.94
HMG20B-215ENST00000585741 MT-ATP8P03928 68 aa9.2□□□□□ -0.94
HMG20B-215ENST00000585741 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
HMG20B-215ENST00000585741 MUC17Q685J3 4493 aa9.19□□□□□ -0.94
HMG20B-215ENST00000585741 A0A087WVE0 104 aa9.17□□□□□ -0.94
HMG20B-215ENST00000585741 KRTAP16-1A8MUX0 517 aa9.17□□□□□ -0.94
HMG20B-215ENST00000585741 IMUPQ9GZP8 106 aa9.17□□□□□ -0.94
HMG20B-215ENST00000585741 Q75L30 129 aa9.15□□□□□ -0.94
HMG20B-215ENST00000585741 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.94
HMG20B-215ENST00000585741 A8MUU9 505 aa9.14□□□□□ -0.95
HMG20B-215ENST00000585741 RPL37P61927 97 aaKnown RBP9.14□□□□□ -0.95
HMG20B-215ENST00000585741 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
HMG20B-215ENST00000585741 SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
HMG20B-215ENST00000585741 A0A0U1RQV1 116 aa9.11□□□□□ -0.95
HMG20B-215ENST00000585741 Q8N9P0 234 aaPredicted RBP9.11□□□□□ -0.95
HMG20B-215ENST00000585741 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
HMG20B-215ENST00000585741 PCOTHQ58A44 107 aa9.05□□□□□ -0.96
HMG20B-215ENST00000585741 TP53AIP1Q9HCN2 124 aa9.05□□□□□ -0.96
HMG20B-215ENST00000585741 ZCCHC13Q8WW36 166 aaKnown RBP9.03□□□□□ -0.96
HMG20B-215ENST00000585741 KRTAP9-6A0A140TA67 174 aa9.02□□□□□ -0.97
HMG20B-215ENST00000585741 FAM236AA0A1B0GUQ0 79 aa9.02□□□□□ -0.97
HMG20B-215ENST00000585741 FAM236BA0A1B0GV22 79 aa9.02□□□□□ -0.97
HMG20B-215ENST00000585741 UQCRQO14949 82 aa8.96□□□□□ -0.98
HMG20B-215ENST00000585741 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
HMG20B-215ENST00000585741 ATOX1O00244 68 aa8.92□□□□□ -0.98
HMG20B-215ENST00000585741 TRAV22A0A0B4J277 110 aa8.91□□□□□ -0.98
HMG20B-215ENST00000585741 Q5W150 140 aa8.9□□□□□ -0.98
HMG20B-215ENST00000585741 OCR1Q9BZK8 76 aa8.9□□□□□ -0.98
HMG20B-215ENST00000585741 MP68P56378 58 aa8.88□□□□□ -0.99
HMG20B-215ENST00000585741 H0Y9P7 68 aa8.87□□□□□ -0.99
HMG20B-215ENST00000585741 IGKV2D-30A0A075B6S6 120 aa8.86□□□□□ -0.99
HMG20B-215ENST00000585741 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
HMG20B-215ENST00000585741 TRAV7A0A075B6U4 112 aa8.85□□□□□ -0.99
HMG20B-215ENST00000585741 C5orf47Q569G3 176 aa8.85□□□□□ -0.99
HMG20B-215ENST00000585741 SPINK7P58062 85 aa8.83□□□□□ -1
HMG20B-215ENST00000585741 C7orf65Q6ZTY9 151 aa8.83□□□□□ -1
HMG20B-215ENST00000585741 KRTAP4-1Q9BYQ7 146 aa8.82□□□□□ -1
HMG20B-215ENST00000585741 FSIP2Q5CZC0 6907 aa8.8□□□□□ -1
HMG20B-215ENST00000585741 LOC101927531A0A1B0GV80 90 aa8.8□□□□□ -1
HMG20B-215ENST00000585741 LINC00208Q96KT6 92 aa8.79□□□□□ -1
HMG20B-215ENST00000585741 SERP2Q8N6R1 65 aa8.78□□□□□ -1
HMG20B-215ENST00000585741 C1orf64Q8NEQ6 169 aa8.78□□□□□ -1
HMG20B-215ENST00000585741 H3BPC8 53 aa8.77□□□□□ -1.01
HMG20B-215ENST00000585741 LCE2DQ5TA82 110 aaPredicted RBP8.77□□□□□ -1.01
HMG20B-215ENST00000585741 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
HMG20B-215ENST00000585741 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
HMG20B-215ENST00000585741 CYP4F30PQ9H0H9 118 aa8.71□□□□□ -1.02
HMG20B-215ENST00000585741 FAM236DA0A1B0GTK5 79 aa8.69□□□□□ -1.02
HMG20B-215ENST00000585741 FAM236CP0DP71 79 aa8.69□□□□□ -1.02
HMG20B-215ENST00000585741 HRES1P13985 223 aa8.67□□□□□ -1.02
HMG20B-215ENST00000585741 COX7CP15954 63 aa8.67□□□□□ -1.02
HMG20B-215ENST00000585741 LCE2CQ5TA81 110 aa8.67□□□□□ -1.02
HMG20B-215ENST00000585741 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
HMG20B-215ENST00000585741 C20orf197Q8N268 126 aa8.66□□□□□ -1.02
HMG20B-215ENST00000585741 CRCT1Q9UGL9 99 aa8.65□□□□□ -1.02
HMG20B-215ENST00000585741 KRTAP19-2Q3LHN2 52 aa8.63□□□□□ -1.03
HMG20B-215ENST00000585741 SNURFQ9Y675 71 aa8.63□□□□□ -1.03
HMG20B-215ENST00000585741 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
HMG20B-215ENST00000585741 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
HMG20B-215ENST00000585741 MPLKIPQ8TAP9 179 aa8.57□□□□□ -1.04
HMG20B-215ENST00000585741 MT1HP80294 61 aa8.53□□□□□ -1.04
HMG20B-215ENST00000585741 NDUFC1O43677 76 aa8.49□□□□□ -1.05
HMG20B-215ENST00000585741 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
HMG20B-215ENST00000585741 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
HMG20B-215ENST00000585741 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
HMG20B-215ENST00000585741 A8MUN3 132 aa8.44□□□□□ -1.06
HMG20B-215ENST00000585741 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
HMG20B-215ENST00000585741 KRTAP10-6P60371 365 aaPredicted RBP8.4□□□□□ -1.06
HMG20B-215ENST00000585741 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms