RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SPRR1AP35321 89 aa2.92□□□□□ -1.94
VAPA-207ENST00000583879 ATP11AUNQ6ZP68 121 aa2.92□□□□□ -1.94
VAPA-207ENST00000583879 KCNQ1DNQ9H478 68 aa2.92□□□□□ -1.94
VAPA-207ENST00000583879 PRO0461Q9UI25 63 aa2.92□□□□□ -1.94
VAPA-207ENST00000583879 hADV29S1A0JD25 119 aa2.91□□□□□ -1.94
VAPA-207ENST00000583879 KRTAP4-16G5E9R7 235 aaPredicted RBP2.91□□□□□ -1.94
VAPA-207ENST00000583879 ZNF22P17026 224 aaPredicted RBP2.91□□□□□ -1.94
VAPA-207ENST00000583879 LINC00158P58513 81 aa2.91□□□□□ -1.94
VAPA-207ENST00000583879 KRTDAPP60985 99 aa2.91□□□□□ -1.94
VAPA-207ENST00000583879 MOBPQ13875 183 aa2.91□□□□□ -1.94
VAPA-207ENST00000583879 PCOTHQ58A44 107 aa2.91□□□□□ -1.94
VAPA-207ENST00000583879 SFTA2Q6UW10 78 aa2.91□□□□□ -1.94
VAPA-207ENST00000583879 CEND1Q8N111 149 aa2.91□□□□□ -1.94
VAPA-207ENST00000583879 PRAC1Q96KF2 57 aa2.91□□□□□ -1.94
VAPA-207ENST00000583879 IGLV8-61A0A075B6I0 122 aa2.9□□□□□ -1.95
VAPA-207ENST00000583879 ETDCA0A1B0GVM5 59 aa2.9□□□□□ -1.95
VAPA-207ENST00000583879 LEPROTO15243 131 aa2.9□□□□□ -1.95
VAPA-207ENST00000583879 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
VAPA-207ENST00000583879 SERP2Q8N6R1 65 aa2.9□□□□□ -1.95
VAPA-207ENST00000583879 ERC2-IT1O76042 136 aa2.89□□□□□ -1.95
VAPA-207ENST00000583879 SMIM13P0DJ93 91 aa2.89□□□□□ -1.95
VAPA-207ENST00000583879 TRBV10-3A0A0K0K1G6 114 aa2.88□□□□□ -1.95
VAPA-207ENST00000583879 C11orf86A6NJI1 115 aa2.88□□□□□ -1.95
VAPA-207ENST00000583879 M0R2T5 61 aa2.88□□□□□ -1.95
VAPA-207ENST00000583879 TMEM170BQ5T4T1 132 aa2.88□□□□□ -1.95
VAPA-207ENST00000583879 SOSTDC1Q6X4U4 206 aa2.88□□□□□ -1.95
VAPA-207ENST00000583879 BAGE3Q86Y29 109 aa2.88□□□□□ -1.95
VAPA-207ENST00000583879 A0A096LNJ9 63 aa2.87□□□□□ -1.95
VAPA-207ENST00000583879 A6NN06 94 aa2.87□□□□□ -1.95
VAPA-207ENST00000583879 NCR3O14931 201 aa2.87□□□□□ -1.95
VAPA-207ENST00000583879 CCKP06307 115 aa2.87□□□□□ -1.95
VAPA-207ENST00000583879 ACYP1P07311 99 aa2.87□□□□□ -1.95
VAPA-207ENST00000583879 TSPEAR-AS2P59090 65 aa2.87□□□□□ -1.95
VAPA-207ENST00000583879 Q9BRP9 147 aa2.87□□□□□ -1.95
VAPA-207ENST00000583879 C9orf92A6NGG3 77 aa2.86□□□□□ -1.95
VAPA-207ENST00000583879 NDUFC1O43677 76 aa2.86□□□□□ -1.95
VAPA-207ENST00000583879 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
VAPA-207ENST00000583879 MIR7-3HGQ8N6C7 128 aa2.86□□□□□ -1.95
VAPA-207ENST00000583879 CLEC2BQ92478 149 aa2.86□□□□□ -1.95
VAPA-207ENST00000583879 A0A0J9YXY3 114 aa2.85□□□□□ -1.95
VAPA-207ENST00000583879 TMEM223A0PJW6 202 aa2.85□□□□□ -1.95
VAPA-207ENST00000583879 Q1T7F1 81 aa2.85□□□□□ -1.95
VAPA-207ENST00000583879 Q6ZRX8 168 aa2.85□□□□□ -1.95
VAPA-207ENST00000583879 CHCHD1Q96BP2 118 aaKnown RBP2.85□□□□□ -1.95
VAPA-207ENST00000583879 LOC107984156A0A0G2JMH3 177 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 TRBV10-2A0A0K0K1G8 114 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 K7ERS5 55 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 IGLV6-57P01721 117 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 ARL17AQ8IVW1 177 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 ST20-AS1Q8NBB2 130 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 LIMD2Q9BT23 127 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 TTTY13Q9BZ97 58 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 C8orf17Q9NRJ1 99 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 DHRS4-AS1Q9P1J3 65 aa2.84□□□□□ -1.95
VAPA-207ENST00000583879 COX8AP10176 69 aa2.83□□□□□ -1.96
VAPA-207ENST00000583879 RBM3P98179 157 aaKnown RBP2.83□□□□□ -1.96
VAPA-207ENST00000583879 HIGD1BQ9P298 99 aa2.83□□□□□ -1.96
VAPA-207ENST00000583879 TRAV12-1A0A0B4J245 112 aa2.82□□□□□ -1.96
VAPA-207ENST00000583879 MYMXA0A1B0GTQ4 84 aa2.82□□□□□ -1.96
VAPA-207ENST00000583879 SPRR1BP22528 89 aa2.82□□□□□ -1.96
VAPA-207ENST00000583879 S100A7L2Q5SY68 101 aa2.82□□□□□ -1.96
VAPA-207ENST00000583879 LINC00643Q86TS7 51 aa2.82□□□□□ -1.96
VAPA-207ENST00000583879 TRAV23DV6A0A075B6W5 121 aa2.81□□□□□ -1.96
VAPA-207ENST00000583879 SERF1AO75920 110 aa2.81□□□□□ -1.96
VAPA-207ENST00000583879 C3orf79P0CE67 100 aa2.81□□□□□ -1.96
VAPA-207ENST00000583879 RPL37P61927 97 aaKnown RBP2.81□□□□□ -1.96
VAPA-207ENST00000583879 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
VAPA-207ENST00000583879 IFI27L1Q96BM0 104 aa2.81□□□□□ -1.96
VAPA-207ENST00000583879 TRAPPC1Q9Y5R8 145 aa2.81□□□□□ -1.96
VAPA-207ENST00000583879 TRAV13-2A0A0B4J235 113 aa2.8□□□□□ -1.96
VAPA-207ENST00000583879 BPY2O14599 106 aa2.8□□□□□ -1.96
VAPA-207ENST00000583879 MT3P25713 68 aa2.8□□□□□ -1.96
VAPA-207ENST00000583879 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
VAPA-207ENST00000583879 C2orf91Q6ZV80 131 aa2.8□□□□□ -1.96
VAPA-207ENST00000583879 NHP2Q9NX24 153 aaKnown RBP2.8□□□□□ -1.96
VAPA-207ENST00000583879 CYSTM1Q9H1C7 97 aa2.79□□□□□ -1.96
VAPA-207ENST00000583879 hDV103S1A0JD37 113 aa2.78□□□□□ -1.96
VAPA-207ENST00000583879 H7BZZ5 65 aa2.78□□□□□ -1.96
VAPA-207ENST00000583879 H7C2G1 150 aa2.78□□□□□ -1.96
VAPA-207ENST00000583879 CFC1P0CG37 223 aa2.78□□□□□ -1.96
VAPA-207ENST00000583879 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
VAPA-207ENST00000583879 KLKP1Q107X0 134 aa2.78□□□□□ -1.96
VAPA-207ENST00000583879 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
VAPA-207ENST00000583879 CYP4F30PQ9H0H9 118 aa2.78□□□□□ -1.96
VAPA-207ENST00000583879 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
VAPA-207ENST00000583879 Q1RN00 199 aa2.77□□□□□ -1.97
VAPA-207ENST00000583879 SMIM29Q86T20 159 aa2.77□□□□□ -1.97
VAPA-207ENST00000583879 DEFB105AQ8NG35 78 aa2.77□□□□□ -1.97
VAPA-207ENST00000583879 USH2AO75445 5202 aa2.77□□□□□ -1.97
VAPA-207ENST00000583879 FLGP20930 4061 aaPredicted RBP2.76□□□□□ -1.97
VAPA-207ENST00000583879 TEX49A0A1B0GTD5 131 aa2.76□□□□□ -1.97
VAPA-207ENST00000583879 A6NED7 52 aa2.76□□□□□ -1.97
VAPA-207ENST00000583879 A8MWP4 228 aa2.76□□□□□ -1.97
VAPA-207ENST00000583879 ADM2Q7Z4H4 148 aa2.76□□□□□ -1.97
VAPA-207ENST00000583879 A0A0G2JQZ4 141 aa2.75□□□□□ -1.97
VAPA-207ENST00000583879 A0A1B0GVX0 72 aa2.75□□□□□ -1.97
VAPA-207ENST00000583879 PLNP26678 52 aa2.75□□□□□ -1.97
VAPA-207ENST00000583879 FXYD2P54710 66 aa2.75□□□□□ -1.97
VAPA-207ENST00000583879 ELOF1P60002 83 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms