RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 A0A087WVE0 104 aa7.84□□□□□ -1.15
CSNK1D-220ENST00000581737 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
CSNK1D-220ENST00000581737 NDUFB1O75438 58 aa7.82□□□□□ -1.16
CSNK1D-220ENST00000581737 A0A0G2JQZ4 141 aa7.81□□□□□ -1.16
CSNK1D-220ENST00000581737 IGKV4-1P06312 121 aa7.81□□□□□ -1.16
CSNK1D-220ENST00000581737 LIMD2Q9BT23 127 aa7.79□□□□□ -1.16
CSNK1D-220ENST00000581737 SPINK1P00995 79 aa7.78□□□□□ -1.16
CSNK1D-220ENST00000581737 SERP2Q8N6R1 65 aa7.78□□□□□ -1.16
CSNK1D-220ENST00000581737 A8MWP4 228 aa7.77□□□□□ -1.17
CSNK1D-220ENST00000581737 UQCRQO14949 82 aa7.77□□□□□ -1.17
CSNK1D-220ENST00000581737 HRCT1Q6UXD1 115 aa7.77□□□□□ -1.17
CSNK1D-220ENST00000581737 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
CSNK1D-220ENST00000581737 COX7CP15954 63 aa7.76□□□□□ -1.17
CSNK1D-220ENST00000581737 DSCR10P59022 87 aa7.76□□□□□ -1.17
CSNK1D-220ENST00000581737 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
CSNK1D-220ENST00000581737 HCG22E2RYF7 251 aa7.75□□□□□ -1.17
CSNK1D-220ENST00000581737 RPS29P62273 56 aaKnown RBP7.75□□□□□ -1.17
CSNK1D-220ENST00000581737 Q8N9L7 120 aa7.75□□□□□ -1.17
CSNK1D-220ENST00000581737 K7EQZ3 153 aa7.74□□□□□ -1.17
CSNK1D-220ENST00000581737 ASB16-AS1Q495Z4 193 aa7.74□□□□□ -1.17
CSNK1D-220ENST00000581737 Q5XG85 94 aa7.73□□□□□ -1.17
CSNK1D-220ENST00000581737 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
CSNK1D-220ENST00000581737 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
CSNK1D-220ENST00000581737 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
CSNK1D-220ENST00000581737 PRR4Q16378 134 aa7.68□□□□□ -1.18
CSNK1D-220ENST00000581737 MUC17Q685J3 4493 aa7.67□□□□□ -1.18
CSNK1D-220ENST00000581737 CASC2Q6XLA1 102 aa7.67□□□□□ -1.18
CSNK1D-220ENST00000581737 Q96NJ1 140 aa7.67□□□□□ -1.18
CSNK1D-220ENST00000581737 A0A1B0GVX0 72 aa7.66□□□□□ -1.18
CSNK1D-220ENST00000581737 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
CSNK1D-220ENST00000581737 C8orf87E5RJ46 101 aa7.65□□□□□ -1.18
CSNK1D-220ENST00000581737 CCDC179H3BU77 68 aa7.65□□□□□ -1.18
CSNK1D-220ENST00000581737 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.18
CSNK1D-220ENST00000581737 RETNLBQ9BQ08 111 aa7.65□□□□□ -1.18
CSNK1D-220ENST00000581737 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
CSNK1D-220ENST00000581737 hDV103S1A0JD37 113 aa7.62□□□□□ -1.19
CSNK1D-220ENST00000581737 C8orf17Q9NRJ1 99 aa7.62□□□□□ -1.19
CSNK1D-220ENST00000581737 IGHV6-1A0A0B4J1U7 121 aa7.61□□□□□ -1.19
CSNK1D-220ENST00000581737 OCR1Q9BZK8 76 aa7.61□□□□□ -1.19
CSNK1D-220ENST00000581737 IGLV7-46A0A075B6I9 117 aa7.6□□□□□ -1.19
CSNK1D-220ENST00000581737 MMP24-AS1A0A0U1RRL7 71 aa7.6□□□□□ -1.19
CSNK1D-220ENST00000581737 TMEM254Q8TBM7 123 aa7.6□□□□□ -1.19
CSNK1D-220ENST00000581737 TP53AIP1Q9HCN2 124 aa7.6□□□□□ -1.19
CSNK1D-220ENST00000581737 NDUFC1O43677 76 aa7.59□□□□□ -1.19
CSNK1D-220ENST00000581737 C5orf47Q569G3 176 aa7.59□□□□□ -1.19
CSNK1D-220ENST00000581737 MP68P56378 58 aa7.58□□□□□ -1.2
CSNK1D-220ENST00000581737 C20orf197Q8N268 126 aa7.58□□□□□ -1.2
CSNK1D-220ENST00000581737 KLKP1Q107X0 134 aa7.56□□□□□ -1.2
CSNK1D-220ENST00000581737 C1orf195Q5TG92 126 aa7.56□□□□□ -1.2
CSNK1D-220ENST00000581737 H3BPC8 53 aa7.55□□□□□ -1.2
CSNK1D-220ENST00000581737 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
CSNK1D-220ENST00000581737 MRPL34Q9BQ48 92 aaKnown RBP7.55□□□□□ -1.2
CSNK1D-220ENST00000581737 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
CSNK1D-220ENST00000581737 TMEM258P61165 79 aa7.53□□□□□ -1.2
CSNK1D-220ENST00000581737 NDUFS5O43920 106 aa7.52□□□□□ -1.21
CSNK1D-220ENST00000581737 LINC00313P59037 77 aa7.52□□□□□ -1.21
CSNK1D-220ENST00000581737 FSIP2Q5CZC0 6907 aa7.5□□□□□ -1.21
CSNK1D-220ENST00000581737 TRAV22A0A0B4J277 110 aa7.48□□□□□ -1.21
CSNK1D-220ENST00000581737 ATP5EP56381 51 aaPredicted RBP7.48□□□□□ -1.21
CSNK1D-220ENST00000581737 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
CSNK1D-220ENST00000581737 H0Y9P7 68 aa7.47□□□□□ -1.21
CSNK1D-220ENST00000581737 SNURFQ9Y675 71 aa7.46□□□□□ -1.22
CSNK1D-220ENST00000581737 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
CSNK1D-220ENST00000581737 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
CSNK1D-220ENST00000581737 LINC00208Q96KT6 92 aa7.41□□□□□ -1.22
CSNK1D-220ENST00000581737 H7BZZ5 65 aa7.4□□□□□ -1.22
CSNK1D-220ENST00000581737 Q8N9P0 234 aaPredicted RBP7.39□□□□□ -1.23
CSNK1D-220ENST00000581737 LOC101927531A0A1B0GV80 90 aa7.38□□□□□ -1.23
CSNK1D-220ENST00000581737 C9orf92A6NGG3 77 aa7.38□□□□□ -1.23
CSNK1D-220ENST00000581737 NOTCH2NLQ7Z3S9 236 aa7.38□□□□□ -1.23
CSNK1D-220ENST00000581737 C1orf64Q8NEQ6 169 aa7.38□□□□□ -1.23
CSNK1D-220ENST00000581737 ZCCHC13Q8WW36 166 aaKnown RBP7.38□□□□□ -1.23
CSNK1D-220ENST00000581737 XP32Q5T750 250 aa7.36□□□□□ -1.23
CSNK1D-220ENST00000581737 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
CSNK1D-220ENST00000581737 CRCT1Q9UGL9 99 aa7.34□□□□□ -1.23
CSNK1D-220ENST00000581737 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
CSNK1D-220ENST00000581737 SEC61BP60468 96 aaKnown RBP7.33□□□□□ -1.24
CSNK1D-220ENST00000581737 LCE2DQ5TA82 110 aaPredicted RBP7.33□□□□□ -1.24
CSNK1D-220ENST00000581737 SPANXA2-OT1Q8N9U9 137 aa7.31□□□□□ -1.24
CSNK1D-220ENST00000581737 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
CSNK1D-220ENST00000581737 SERP1Q9Y6X1 66 aa7.28□□□□□ -1.24
CSNK1D-220ENST00000581737 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
CSNK1D-220ENST00000581737 C20orf166-AS1Q96NR2 134 aa7.25□□□□□ -1.25
CSNK1D-220ENST00000581737 A8MUU9 505 aa7.24□□□□□ -1.25
CSNK1D-220ENST00000581737 Q5W150 140 aa7.24□□□□□ -1.25
CSNK1D-220ENST00000581737 Q75L30 129 aa7.24□□□□□ -1.25
CSNK1D-220ENST00000581737 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
CSNK1D-220ENST00000581737 CYP4F30PQ9H0H9 118 aa7.23□□□□□ -1.25
CSNK1D-220ENST00000581737 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
CSNK1D-220ENST00000581737 PCOTHQ58A44 107 aa7.21□□□□□ -1.26
CSNK1D-220ENST00000581737 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
CSNK1D-220ENST00000581737 ATP11AUNQ6ZP68 121 aa7.19□□□□□ -1.26
CSNK1D-220ENST00000581737 IGKV2D-30A0A075B6S6 120 aa7.16□□□□□ -1.26
CSNK1D-220ENST00000581737 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
CSNK1D-220ENST00000581737 SMIM26A0A096LP01 95 aa7.1□□□□□ -1.27
CSNK1D-220ENST00000581737 HRES1P13985 223 aa7.09□□□□□ -1.27
CSNK1D-220ENST00000581737 ACYP2P14621 99 aa7.08□□□□□ -1.28
CSNK1D-220ENST00000581737 A8MUN3 132 aa7.06□□□□□ -1.28
CSNK1D-220ENST00000581737 KRTAP19-2Q3LHN2 52 aa7.06□□□□□ -1.28
CSNK1D-220ENST00000581737 DMAC1Q96GE9 116 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms