RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 LRP1BQ9NZR2 4599 aa4.8□□□□□ -1.64
TVP23C-208ENST00000581273 IGLV7-46A0A075B6I9 117 aa4.8□□□□□ -1.64
TVP23C-208ENST00000581273 IGKV2D-24A0A075B6R9 120 aa4.8□□□□□ -1.64
TVP23C-208ENST00000581273 SPRR1AP35321 89 aa4.8□□□□□ -1.64
TVP23C-208ENST00000581273 CASC2Q6XLA1 102 aa4.8□□□□□ -1.64
TVP23C-208ENST00000581273 KRTAP19-1Q8IUB9 90 aa4.8□□□□□ -1.64
TVP23C-208ENST00000581273 C11orf45Q8TAV5 145 aa4.8□□□□□ -1.64
TVP23C-208ENST00000581273 TP53AIP1Q9HCN2 124 aa4.8□□□□□ -1.64
TVP23C-208ENST00000581273 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
TVP23C-208ENST00000581273 PRR4Q16378 134 aa4.79□□□□□ -1.64
TVP23C-208ENST00000581273 COA5Q86WW8 74 aa4.79□□□□□ -1.64
TVP23C-208ENST00000581273 Q8N1X5 172 aa4.79□□□□□ -1.64
TVP23C-208ENST00000581273 C7orf33Q8WU49 177 aa4.79□□□□□ -1.64
TVP23C-208ENST00000581273 FLG2Q5D862 2391 aaPredicted RBP4.79□□□□□ -1.64
TVP23C-208ENST00000581273 C9orf163Q8N9P6 203 aa4.78□□□□□ -1.64
TVP23C-208ENST00000581273 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
TVP23C-208ENST00000581273 KRTAP29-1A8MX34 341 aaPredicted RBP4.77□□□□□ -1.65
TVP23C-208ENST00000581273 WFDC13Q8IUB5 93 aa4.77□□□□□ -1.65
TVP23C-208ENST00000581273 APLNQ9ULZ1 77 aa4.77□□□□□ -1.65
TVP23C-208ENST00000581273 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
TVP23C-208ENST00000581273 A8MWP4 228 aa4.76□□□□□ -1.65
TVP23C-208ENST00000581273 KRTAP4-16G5E9R7 235 aaPredicted RBP4.75□□□□□ -1.65
TVP23C-208ENST00000581273 WFDC10BQ8IUB3 73 aa4.75□□□□□ -1.65
TVP23C-208ENST00000581273 DNAH5Q8TE73 4624 aa4.75□□□□□ -1.65
TVP23C-208ENST00000581273 CNBPP62633 177 aaKnown RBP4.74□□□□□ -1.65
TVP23C-208ENST00000581273 C15orf56Q8N910 161 aa4.74□□□□□ -1.65
TVP23C-208ENST00000581273 RTL8CO15255 209 aa4.73□□□□□ -1.65
TVP23C-208ENST00000581273 KRTAP26-1Q6PEX3 210 aa4.73□□□□□ -1.65
TVP23C-208ENST00000581273 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
TVP23C-208ENST00000581273 DEFB131BA0A096LNP1 70 aa4.72□□□□□ -1.65
TVP23C-208ENST00000581273 CDK2AP2O75956 126 aa4.72□□□□□ -1.65
TVP23C-208ENST00000581273 HTN3P15516 51 aa4.72□□□□□ -1.65
TVP23C-208ENST00000581273 MOBPQ13875 183 aa4.72□□□□□ -1.65
TVP23C-208ENST00000581273 REG3GQ6UW15 175 aa4.72□□□□□ -1.65
TVP23C-208ENST00000581273 IGFL1Q6UW32 110 aa4.72□□□□□ -1.65
TVP23C-208ENST00000581273 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
TVP23C-208ENST00000581273 A0A087WSZ3 146 aa4.71□□□□□ -1.66
TVP23C-208ENST00000581273 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
TVP23C-208ENST00000581273 LINC01556Q5JQF7 62 aa4.71□□□□□ -1.66
TVP23C-208ENST00000581273 UBE2DNLQ8IWF7 75 aa4.71□□□□□ -1.66
TVP23C-208ENST00000581273 Q8NAQ8 132 aa4.71□□□□□ -1.66
TVP23C-208ENST00000581273 C8orf87E5RJ46 101 aa4.7□□□□□ -1.66
TVP23C-208ENST00000581273 SERTAD4-AS1Q5TG53 156 aa4.7□□□□□ -1.66
TVP23C-208ENST00000581273 MUC2Q02817 5179 aa4.7□□□□□ -1.66
TVP23C-208ENST00000581273 FAT1Q14517 4588 aa4.69□□□□□ -1.66
TVP23C-208ENST00000581273 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
TVP23C-208ENST00000581273 SPRR1BP22528 89 aa4.68□□□□□ -1.66
TVP23C-208ENST00000581273 C1orf134Q5TEV5 83 aa4.67□□□□□ -1.66
TVP23C-208ENST00000581273 Q6ZR54 194 aa4.67□□□□□ -1.66
TVP23C-208ENST00000581273 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
TVP23C-208ENST00000581273 H0Y9J4 135 aa4.66□□□□□ -1.66
TVP23C-208ENST00000581273 RPL37AP61513 92 aaKnown RBP4.66□□□□□ -1.66
TVP23C-208ENST00000581273 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
TVP23C-208ENST00000581273 SPAG11AQ6PDA7 123 aa4.66□□□□□ -1.66
TVP23C-208ENST00000581273 LINC00472Q9H8W2 130 aa4.66□□□□□ -1.66
TVP23C-208ENST00000581273 A8MU10 97 aa4.65□□□□□ -1.67
TVP23C-208ENST00000581273 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
TVP23C-208ENST00000581273 DNAH10OSP0CZ25 163 aa4.64□□□□□ -1.67
TVP23C-208ENST00000581273 DEFB116Q30KQ4 102 aa4.64□□□□□ -1.67
TVP23C-208ENST00000581273 ACYP2P14621 99 aa4.63□□□□□ -1.67
TVP23C-208ENST00000581273 RETNLBQ9BQ08 111 aa4.63□□□□□ -1.67
TVP23C-208ENST00000581273 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
TVP23C-208ENST00000581273 LINC00313P59037 77 aa4.62□□□□□ -1.67
TVP23C-208ENST00000581273 LRP2P98164 4655 aa4.61□□□□□ -1.67
TVP23C-208ENST00000581273 IGKV2-24A0A0C4DH68 120 aa4.61□□□□□ -1.67
TVP23C-208ENST00000581273 HRES1P13985 223 aa4.61□□□□□ -1.67
TVP23C-208ENST00000581273 SPINK7P58062 85 aa4.61□□□□□ -1.67
TVP23C-208ENST00000581273 PCOTHQ58A44 107 aa4.61□□□□□ -1.67
TVP23C-208ENST00000581273 C8orf17Q9NRJ1 99 aa4.6□□□□□ -1.67
TVP23C-208ENST00000581273 NBDYA0A0U1RRE5 68 aa4.59□□□□□ -1.67
TVP23C-208ENST00000581273 C14orf177Q52M58 125 aa4.58□□□□□ -1.68
TVP23C-208ENST00000581273 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
TVP23C-208ENST00000581273 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
TVP23C-208ENST00000581273 MRPL34Q9BQ48 92 aaKnown RBP4.58□□□□□ -1.68
TVP23C-208ENST00000581273 A0A1B0GU69 56 aa4.57□□□□□ -1.68
TVP23C-208ENST00000581273 FAM168BA1KXE4 195 aa4.57□□□□□ -1.68
TVP23C-208ENST00000581273 KRTAP10-2P60368 255 aa4.57□□□□□ -1.68
TVP23C-208ENST00000581273 Q5VSD8 79 aa4.57□□□□□ -1.68
TVP23C-208ENST00000581273 A0A1B0GVX0 72 aa4.56□□□□□ -1.68
TVP23C-208ENST00000581273 UQCR11O14957 56 aa4.56□□□□□ -1.68
TVP23C-208ENST00000581273 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
TVP23C-208ENST00000581273 ZNF706Q9Y5V0 76 aaPredicted RBP4.55□□□□□ -1.68
TVP23C-208ENST00000581273 PKHD1L1Q86WI1 4243 aa4.55□□□□□ -1.68
TVP23C-208ENST00000581273 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
TVP23C-208ENST00000581273 PRLHP81277 87 aa4.54□□□□□ -1.68
TVP23C-208ENST00000581273 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
TVP23C-208ENST00000581273 KRTAP7-1Q8IUC3 87 aa4.53□□□□□ -1.68
TVP23C-208ENST00000581273 KRTAP1-5Q9BYS1 174 aa4.53□□□□□ -1.68
TVP23C-208ENST00000581273 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
TVP23C-208ENST00000581273 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
TVP23C-208ENST00000581273 SMR3BP02814 79 aaPredicted RBP4.51□□□□□ -1.69
TVP23C-208ENST00000581273 IGHV6-1A0A0B4J1U7 121 aa4.5□□□□□ -1.69
TVP23C-208ENST00000581273 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
TVP23C-208ENST00000581273 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
TVP23C-208ENST00000581273 A0A0G2JQZ4 141 aa4.49□□□□□ -1.69
TVP23C-208ENST00000581273 A0A1W2PNN7 141 aa4.49□□□□□ -1.69
TVP23C-208ENST00000581273 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
TVP23C-208ENST00000581273 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
TVP23C-208ENST00000581273 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
TVP23C-208ENST00000581273 Q96NJ1 140 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms