RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 LINC00483Q53H64 154 aa5.51□□□□□ -1.53
NPLOC4-216ENST00000574344 SERP2Q8N6R1 65 aa5.51□□□□□ -1.53
NPLOC4-216ENST00000574344 SPINK1P00995 79 aa5.5□□□□□ -1.53
NPLOC4-216ENST00000574344 FP248Q71RG6 208 aaPredicted RBP5.5□□□□□ -1.53
NPLOC4-216ENST00000574344 MUC2Q02817 5179 aa5.5□□□□□ -1.53
NPLOC4-216ENST00000574344 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
NPLOC4-216ENST00000574344 SS18L2Q9UHA2 77 aa5.49□□□□□ -1.53
NPLOC4-216ENST00000574344 A0A087WSZ3 146 aa5.48□□□□□ -1.53
NPLOC4-216ENST00000574344 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
NPLOC4-216ENST00000574344 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
NPLOC4-216ENST00000574344 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
NPLOC4-216ENST00000574344 J3KT08 172 aa5.46□□□□□ -1.54
NPLOC4-216ENST00000574344 RPS29P62273 56 aaKnown RBP5.45□□□□□ -1.54
NPLOC4-216ENST00000574344 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
NPLOC4-216ENST00000574344 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
NPLOC4-216ENST00000574344 Q8N9L7 120 aa5.43□□□□□ -1.54
NPLOC4-216ENST00000574344 A0A0G2JQZ4 141 aa5.41□□□□□ -1.54
NPLOC4-216ENST00000574344 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
NPLOC4-216ENST00000574344 K7EQZ3 153 aa5.41□□□□□ -1.54
NPLOC4-216ENST00000574344 NDUFB1O75438 58 aa5.41□□□□□ -1.54
NPLOC4-216ENST00000574344 HRCT1Q6UXD1 115 aa5.41□□□□□ -1.54
NPLOC4-216ENST00000574344 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
NPLOC4-216ENST00000574344 A8MWP4 228 aa5.39□□□□□ -1.55
NPLOC4-216ENST00000574344 DSCR10P59022 87 aa5.39□□□□□ -1.55
NPLOC4-216ENST00000574344 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
NPLOC4-216ENST00000574344 TMEM258P61165 79 aa5.39□□□□□ -1.55
NPLOC4-216ENST00000574344 ASB16-AS1Q495Z4 193 aa5.38□□□□□ -1.55
NPLOC4-216ENST00000574344 C20orf197Q8N268 126 aa5.38□□□□□ -1.55
NPLOC4-216ENST00000574344 NDUFC1O43677 76 aa5.37□□□□□ -1.55
NPLOC4-216ENST00000574344 CD164Q04900 197 aa5.37□□□□□ -1.55
NPLOC4-216ENST00000574344 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
NPLOC4-216ENST00000574344 FAT4Q6V0I7 4981 aa5.37□□□□□ -1.55
NPLOC4-216ENST00000574344 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
NPLOC4-216ENST00000574344 KLKP1Q107X0 134 aa5.35□□□□□ -1.55
NPLOC4-216ENST00000574344 DEFB116Q30KQ4 102 aa5.35□□□□□ -1.55
NPLOC4-216ENST00000574344 XP32Q5T750 250 aa5.35□□□□□ -1.55
NPLOC4-216ENST00000574344 CASC2Q6XLA1 102 aa5.35□□□□□ -1.55
NPLOC4-216ENST00000574344 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
NPLOC4-216ENST00000574344 WFDC13Q8IUB5 93 aa5.34□□□□□ -1.55
NPLOC4-216ENST00000574344 TMEM254Q8TBM7 123 aa5.34□□□□□ -1.55
NPLOC4-216ENST00000574344 OCR1Q9BZK8 76 aa5.34□□□□□ -1.55
NPLOC4-216ENST00000574344 C9orf92A6NGG3 77 aa5.33□□□□□ -1.56
NPLOC4-216ENST00000574344 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
NPLOC4-216ENST00000574344 MP68P56378 58 aa5.32□□□□□ -1.56
NPLOC4-216ENST00000574344 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
NPLOC4-216ENST00000574344 FAM236DA0A1B0GTK5 79 aa5.31□□□□□ -1.56
NPLOC4-216ENST00000574344 FAM236CP0DP71 79 aa5.31□□□□□ -1.56
NPLOC4-216ENST00000574344 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
NPLOC4-216ENST00000574344 A0A1B0GVX0 72 aa5.3□□□□□ -1.56
NPLOC4-216ENST00000574344 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
NPLOC4-216ENST00000574344 SNURFQ9Y675 71 aa5.3□□□□□ -1.56
NPLOC4-216ENST00000574344 hDV103S1A0JD37 113 aa5.29□□□□□ -1.56
NPLOC4-216ENST00000574344 Q96NJ1 140 aa5.29□□□□□ -1.56
NPLOC4-216ENST00000574344 IGHV6-1A0A0B4J1U7 121 aa5.28□□□□□ -1.56
NPLOC4-216ENST00000574344 MMP24-AS1A0A0U1RRL7 71 aa5.28□□□□□ -1.56
NPLOC4-216ENST00000574344 C8orf87E5RJ46 101 aa5.27□□□□□ -1.57
NPLOC4-216ENST00000574344 H3BPC8 53 aa5.27□□□□□ -1.57
NPLOC4-216ENST00000574344 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
NPLOC4-216ENST00000574344 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
NPLOC4-216ENST00000574344 C8orf17Q9NRJ1 99 aa5.27□□□□□ -1.57
NPLOC4-216ENST00000574344 H7BZZ5 65 aa5.26□□□□□ -1.57
NPLOC4-216ENST00000574344 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
NPLOC4-216ENST00000574344 C1orf195Q5TG92 126 aa5.25□□□□□ -1.57
NPLOC4-216ENST00000574344 Q5XG85 94 aa5.25□□□□□ -1.57
NPLOC4-216ENST00000574344 H0Y9P7 68 aa5.24□□□□□ -1.57
NPLOC4-216ENST00000574344 NDUFS5O43920 106 aa5.24□□□□□ -1.57
NPLOC4-216ENST00000574344 TRAV22A0A0B4J277 110 aa5.23□□□□□ -1.57
NPLOC4-216ENST00000574344 MRPL34Q9BQ48 92 aaKnown RBP5.23□□□□□ -1.57
NPLOC4-216ENST00000574344 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
NPLOC4-216ENST00000574344 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
NPLOC4-216ENST00000574344 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
NPLOC4-216ENST00000574344 LINC00208Q96KT6 92 aa5.19□□□□□ -1.58
NPLOC4-216ENST00000574344 LINC00313P59037 77 aa5.17□□□□□ -1.58
NPLOC4-216ENST00000574344 C1orf64Q8NEQ6 169 aa5.17□□□□□ -1.58
NPLOC4-216ENST00000574344 ZCCHC13Q8WW36 166 aaKnown RBP5.17□□□□□ -1.58
NPLOC4-216ENST00000574344 COX6B2Q6YFQ2 88 aa5.16□□□□□ -1.58
NPLOC4-216ENST00000574344 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
NPLOC4-216ENST00000574344 LCE2CQ5TA81 110 aa5.15□□□□□ -1.59
NPLOC4-216ENST00000574344 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
NPLOC4-216ENST00000574344 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
NPLOC4-216ENST00000574344 MT1HP80294 61 aa5.13□□□□□ -1.59
NPLOC4-216ENST00000574344 SPANXA2-OT1Q8N9U9 137 aa5.13□□□□□ -1.59
NPLOC4-216ENST00000574344 M0R2T5 61 aa5.12□□□□□ -1.59
NPLOC4-216ENST00000574344 ATP11AUNQ6ZP68 121 aa5.11□□□□□ -1.59
NPLOC4-216ENST00000574344 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
NPLOC4-216ENST00000574344 CYP4F30PQ9H0H9 118 aa5.1□□□□□ -1.59
NPLOC4-216ENST00000574344 NOTCH2NLQ7Z3S9 236 aa5.09□□□□□ -1.59
NPLOC4-216ENST00000574344 SMIM26A0A096LP01 95 aa5.08□□□□□ -1.6
NPLOC4-216ENST00000574344 Q75L30 129 aa5.08□□□□□ -1.6
NPLOC4-216ENST00000574344 Q8N9P0 234 aaPredicted RBP5.07□□□□□ -1.6
NPLOC4-216ENST00000574344 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
NPLOC4-216ENST00000574344 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
NPLOC4-216ENST00000574344 LORP23490 312 aaPredicted RBP5.03□□□□□ -1.6
NPLOC4-216ENST00000574344 Q5W150 140 aa5.02□□□□□ -1.61
NPLOC4-216ENST00000574344 C20orf166-AS1Q96NR2 134 aa5.02□□□□□ -1.61
NPLOC4-216ENST00000574344 FLGP20930 4061 aaPredicted RBP5.02□□□□□ -1.61
NPLOC4-216ENST00000574344 CRCT1Q9UGL9 99 aa5.01□□□□□ -1.61
NPLOC4-216ENST00000574344 A8MUU9 505 aa5□□□□□ -1.61
NPLOC4-216ENST00000574344 V9GYY9 64 aa5□□□□□ -1.61
NPLOC4-216ENST00000574344 IGKV2-30P06310 120 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 216.3 ms