RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 FSIP2Q5CZC0 6907 aa6.53□□□□□ -1.36
NPLOC4-213ENST00000573519 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
NPLOC4-213ENST00000573519 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
NPLOC4-213ENST00000573519 Q6ZQT0 140 aa6.53□□□□□ -1.36
NPLOC4-213ENST00000573519 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
NPLOC4-213ENST00000573519 JMJD7-PLA2G4BH0Y9G9 81 aa6.52□□□□□ -1.37
NPLOC4-213ENST00000573519 C14orf132Q9NPU4 83 aa6.52□□□□□ -1.37
NPLOC4-213ENST00000573519 LOC110117498A0A087WWA1 95 aa6.51□□□□□ -1.37
NPLOC4-213ENST00000573519 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
NPLOC4-213ENST00000573519 MTURNQ8N3F0 131 aa6.5□□□□□ -1.37
NPLOC4-213ENST00000573519 A0A1B0GVX0 72 aa6.49□□□□□ -1.37
NPLOC4-213ENST00000573519 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
NPLOC4-213ENST00000573519 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
NPLOC4-213ENST00000573519 FAM236DA0A1B0GTK5 79 aa6.46□□□□□ -1.38
NPLOC4-213ENST00000573519 J3KT08 172 aa6.46□□□□□ -1.38
NPLOC4-213ENST00000573519 FAM236CP0DP71 79 aa6.46□□□□□ -1.38
NPLOC4-213ENST00000573519 PDE6GP18545 87 aa6.46□□□□□ -1.38
NPLOC4-213ENST00000573519 C8orf87E5RJ46 101 aa6.45□□□□□ -1.38
NPLOC4-213ENST00000573519 H3BT86 120 aa6.43□□□□□ -1.38
NPLOC4-213ENST00000573519 A0A1B0GW54 56 aa6.42□□□□□ -1.38
NPLOC4-213ENST00000573519 NDUFB1O75438 58 aa6.42□□□□□ -1.38
NPLOC4-213ENST00000573519 RBM12B-AS1Q9P1G2 102 aa6.42□□□□□ -1.38
NPLOC4-213ENST00000573519 SPCS1Q9Y6A9 102 aa6.42□□□□□ -1.38
NPLOC4-213ENST00000573519 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
NPLOC4-213ENST00000573519 NREPQ16612 68 aa6.41□□□□□ -1.38
NPLOC4-213ENST00000573519 A8MWP4 228 aa6.4□□□□□ -1.38
NPLOC4-213ENST00000573519 HRES1P13985 223 aa6.39□□□□□ -1.39
NPLOC4-213ENST00000573519 C8orf17Q9NRJ1 99 aa6.39□□□□□ -1.39
NPLOC4-213ENST00000573519 COL5A1-AS1Q5SY13 56 aa6.38□□□□□ -1.39
NPLOC4-213ENST00000573519 ZCCHC13Q8WW36 166 aaKnown RBP6.37□□□□□ -1.39
NPLOC4-213ENST00000573519 SMCPP49901 116 aaPredicted RBP6.36□□□□□ -1.39
NPLOC4-213ENST00000573519 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
NPLOC4-213ENST00000573519 MPLKIPQ8TAP9 179 aa6.35□□□□□ -1.39
NPLOC4-213ENST00000573519 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
NPLOC4-213ENST00000573519 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
NPLOC4-213ENST00000573519 PCP4L1A6NKN8 68 aa6.33□□□□□ -1.4
NPLOC4-213ENST00000573519 Q6ZVQ6 151 aa6.33□□□□□ -1.4
NPLOC4-213ENST00000573519 K7EP34 96 aa6.32□□□□□ -1.4
NPLOC4-213ENST00000573519 SPINK7P58062 85 aa6.32□□□□□ -1.4
NPLOC4-213ENST00000573519 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
NPLOC4-213ENST00000573519 MMP24-AS1A0A0U1RRL7 71 aa6.31□□□□□ -1.4
NPLOC4-213ENST00000573519 K7EQZ3 153 aa6.31□□□□□ -1.4
NPLOC4-213ENST00000573519 BPY2O14599 106 aa6.3□□□□□ -1.4
NPLOC4-213ENST00000573519 MT2AP02795 61 aa6.27□□□□□ -1.41
NPLOC4-213ENST00000573519 Q8N9L7 120 aa6.27□□□□□ -1.41
NPLOC4-213ENST00000573519 TMEM254Q8TBM7 123 aa6.27□□□□□ -1.41
NPLOC4-213ENST00000573519 MRPL34Q9BQ48 92 aaKnown RBP6.27□□□□□ -1.41
NPLOC4-213ENST00000573519 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
NPLOC4-213ENST00000573519 WFDC13Q8IUB5 93 aa6.25□□□□□ -1.41
NPLOC4-213ENST00000573519 NDUFS5O43920 106 aa6.24□□□□□ -1.41
NPLOC4-213ENST00000573519 LINC00846Q9NV44 126 aa6.24□□□□□ -1.41
NPLOC4-213ENST00000573519 KRTAP10-10P60014 251 aa6.23□□□□□ -1.41
NPLOC4-213ENST00000573519 GTF2H5Q6ZYL4 71 aa6.23□□□□□ -1.41
NPLOC4-213ENST00000573519 MT1FP04733 61 aa6.22□□□□□ -1.41
NPLOC4-213ENST00000573519 USH2AO75445 5202 aa6.2□□□□□ -1.42
NPLOC4-213ENST00000573519 UBL5Q9BZL1 73 aa6.2□□□□□ -1.42
NPLOC4-213ENST00000573519 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
NPLOC4-213ENST00000573519 ETDBQ3ZM63 59 aa6.18□□□□□ -1.42
NPLOC4-213ENST00000573519 F8W1H4 67 aa6.17□□□□□ -1.42
NPLOC4-213ENST00000573519 Q5W150 140 aa6.17□□□□□ -1.42
NPLOC4-213ENST00000573519 HCG22E2RYF7 251 aa6.16□□□□□ -1.42
NPLOC4-213ENST00000573519 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.42
NPLOC4-213ENST00000573519 IGKV2-30P06310 120 aa6.15□□□□□ -1.42
NPLOC4-213ENST00000573519 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
NPLOC4-213ENST00000573519 LCE2BO14633 110 aa6.13□□□□□ -1.43
NPLOC4-213ENST00000573519 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
NPLOC4-213ENST00000573519 H1FX-AS1Q4G0G2 97 aa6.1□□□□□ -1.43
NPLOC4-213ENST00000573519 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
NPLOC4-213ENST00000573519 CXCL6P80162 114 aa6.08□□□□□ -1.44
NPLOC4-213ENST00000573519 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
NPLOC4-213ENST00000573519 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
NPLOC4-213ENST00000573519 C4orf26Q17RF5 130 aa6.03□□□□□ -1.44
NPLOC4-213ENST00000573519 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
NPLOC4-213ENST00000573519 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
NPLOC4-213ENST00000573519 ACYP1P07311 99 aa5.98□□□□□ -1.45
NPLOC4-213ENST00000573519 TP53AIP1Q9HCN2 124 aa5.98□□□□□ -1.45
NPLOC4-213ENST00000573519 A0A1B0GV90 55 aa5.97□□□□□ -1.45
NPLOC4-213ENST00000573519 FAM240AA0A1B0GVK7 77 aa5.95□□□□□ -1.46
NPLOC4-213ENST00000573519 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
NPLOC4-213ENST00000573519 HIST1H4AP62805 103 aaKnown RBP5.93□□□□□ -1.46
NPLOC4-213ENST00000573519 C5orf47Q569G3 176 aa5.93□□□□□ -1.46
NPLOC4-213ENST00000573519 ATP5EP2Q5VTU8 51 aa5.92□□□□□ -1.46
NPLOC4-213ENST00000573519 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
NPLOC4-213ENST00000573519 C1orf64Q8NEQ6 169 aa5.91□□□□□ -1.46
NPLOC4-213ENST00000573519 S4R3F8 94 aa5.9□□□□□ -1.46
NPLOC4-213ENST00000573519 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
NPLOC4-213ENST00000573519 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
NPLOC4-213ENST00000573519 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
NPLOC4-213ENST00000573519 A0A087WVE0 104 aa5.87□□□□□ -1.47
NPLOC4-213ENST00000573519 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
NPLOC4-213ENST00000573519 CYP4F30PQ9H0H9 118 aa5.87□□□□□ -1.47
NPLOC4-213ENST00000573519 LINC00643Q86TS7 51 aa5.86□□□□□ -1.47
NPLOC4-213ENST00000573519 CSAG1Q6PB30 78 aa5.84□□□□□ -1.47
NPLOC4-213ENST00000573519 LCA10Q71F78 164 aa5.84□□□□□ -1.47
NPLOC4-213ENST00000573519 LOC101927531A0A1B0GV80 90 aa5.83□□□□□ -1.48
NPLOC4-213ENST00000573519 UQCRQO14949 82 aa5.83□□□□□ -1.48
NPLOC4-213ENST00000573519 SYNE2Q8WXH0 6885 aaKnown RBP5.82□□□□□ -1.48
NPLOC4-213ENST00000573519 H0Y9P7 68 aa5.82□□□□□ -1.48
NPLOC4-213ENST00000573519 ATOX1O00244 68 aa5.77□□□□□ -1.49
NPLOC4-213ENST00000573519 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms