RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 BAALC-AS2P0C853 105 aa8.6□□□□□ -1.03
MAP1LC3B-208ENST00000570189 A0A1B0GW54 56 aa8.59□□□□□ -1.03
MAP1LC3B-208ENST00000570189 C9JAW5 83 aa8.59□□□□□ -1.03
MAP1LC3B-208ENST00000570189 HRES1P13985 223 aa8.59□□□□□ -1.03
MAP1LC3B-208ENST00000570189 VPS25Q9BRG1 176 aa8.58□□□□□ -1.04
MAP1LC3B-208ENST00000570189 Q6ZQT0 140 aa8.57□□□□□ -1.04
MAP1LC3B-208ENST00000570189 M0R143 59 aa8.56□□□□□ -1.04
MAP1LC3B-208ENST00000570189 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
MAP1LC3B-208ENST00000570189 JMJD7-PLA2G4BH0Y9G9 81 aa8.55□□□□□ -1.04
MAP1LC3B-208ENST00000570189 ATXN8Q156A1 80 aa8.54□□□□□ -1.04
MAP1LC3B-208ENST00000570189 LOC110117498A0A087WWA1 95 aa8.53□□□□□ -1.04
MAP1LC3B-208ENST00000570189 PDE6GP18545 87 aa8.52□□□□□ -1.05
MAP1LC3B-208ENST00000570189 FAM236DA0A1B0GTK5 79 aa8.51□□□□□ -1.05
MAP1LC3B-208ENST00000570189 FAM236CP0DP71 79 aa8.51□□□□□ -1.05
MAP1LC3B-208ENST00000570189 Q8N9P0 234 aaPredicted RBP8.51□□□□□ -1.05
MAP1LC3B-208ENST00000570189 ZCCHC13Q8WW36 166 aaKnown RBP8.51□□□□□ -1.05
MAP1LC3B-208ENST00000570189 NDUFB1O75438 58 aa8.49□□□□□ -1.05
MAP1LC3B-208ENST00000570189 A8MWP4 228 aa8.47□□□□□ -1.05
MAP1LC3B-208ENST00000570189 SMIM6P0DI80 62 aa8.47□□□□□ -1.05
MAP1LC3B-208ENST00000570189 MT2AP02795 61 aa8.46□□□□□ -1.06
MAP1LC3B-208ENST00000570189 LYRM7Q5U5X0 104 aa8.45□□□□□ -1.06
MAP1LC3B-208ENST00000570189 MTURNQ8N3F0 131 aa8.45□□□□□ -1.06
MAP1LC3B-208ENST00000570189 NAA38Q9BRA0 125 aaKnown RBP8.44□□□□□ -1.06
MAP1LC3B-208ENST00000570189 C8orf17Q9NRJ1 99 aa8.44□□□□□ -1.06
MAP1LC3B-208ENST00000570189 USH2AO75445 5202 aa8.43□□□□□ -1.06
MAP1LC3B-208ENST00000570189 SPINK7P58062 85 aa8.42□□□□□ -1.06
MAP1LC3B-208ENST00000570189 IGKV3D-7A0A0C4DH55 119 aa8.41□□□□□ -1.06
MAP1LC3B-208ENST00000570189 C14orf132Q9NPU4 83 aa8.41□□□□□ -1.06
MAP1LC3B-208ENST00000570189 MT1FP04733 61 aa8.39□□□□□ -1.07
MAP1LC3B-208ENST00000570189 Q6ZVQ6 151 aa8.38□□□□□ -1.07
MAP1LC3B-208ENST00000570189 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
MAP1LC3B-208ENST00000570189 SSPOA2VEC9 5147 aa8.36□□□□□ -1.07
MAP1LC3B-208ENST00000570189 TSTD3H0UI37 97 aa8.36□□□□□ -1.07
MAP1LC3B-208ENST00000570189 NREPQ16612 68 aa8.35□□□□□ -1.07
MAP1LC3B-208ENST00000570189 KRTAP9-3Q9BYQ3 159 aa8.35□□□□□ -1.07
MAP1LC3B-208ENST00000570189 H3BT86 120 aa8.33□□□□□ -1.08
MAP1LC3B-208ENST00000570189 TMEM254Q8TBM7 123 aa8.33□□□□□ -1.08
MAP1LC3B-208ENST00000570189 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
MAP1LC3B-208ENST00000570189 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
MAP1LC3B-208ENST00000570189 LCE2BO14633 110 aa8.3□□□□□ -1.08
MAP1LC3B-208ENST00000570189 MRPL34Q9BQ48 92 aaKnown RBP8.3□□□□□ -1.08
MAP1LC3B-208ENST00000570189 C9orf118A6NHY6 69 aa8.29□□□□□ -1.08
MAP1LC3B-208ENST00000570189 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
MAP1LC3B-208ENST00000570189 A0A1W2PPM0 123 aa8.26□□□□□ -1.09
MAP1LC3B-208ENST00000570189 TAX1BP3O14907 124 aa8.26□□□□□ -1.09
MAP1LC3B-208ENST00000570189 BATFQ16520 125 aa8.26□□□□□ -1.09
MAP1LC3B-208ENST00000570189 hDV103S1A0JD37 113 aa8.25□□□□□ -1.09
MAP1LC3B-208ENST00000570189 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
MAP1LC3B-208ENST00000570189 K7EQZ3 153 aa8.24□□□□□ -1.09
MAP1LC3B-208ENST00000570189 FCGBPQ9Y6R7 5405 aaPredicted RBP8.2□□□□□ -1.1
MAP1LC3B-208ENST00000570189 BPY2O14599 106 aa8.19□□□□□ -1.1
MAP1LC3B-208ENST00000570189 LOC105371267A0A1B0GV96 52 aa8.18□□□□□ -1.1
MAP1LC3B-208ENST00000570189 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
MAP1LC3B-208ENST00000570189 KRTAP9-7A8MTY7 169 aa8.16□□□□□ -1.1
MAP1LC3B-208ENST00000570189 H1FX-AS1Q4G0G2 97 aa8.16□□□□□ -1.1
MAP1LC3B-208ENST00000570189 NDUFS5O43920 106 aa8.14□□□□□ -1.11
MAP1LC3B-208ENST00000570189 Q5W150 140 aa8.12□□□□□ -1.11
MAP1LC3B-208ENST00000570189 C7orf65Q6ZTY9 151 aa8.12□□□□□ -1.11
MAP1LC3B-208ENST00000570189 SPCS1Q9Y6A9 102 aa8.11□□□□□ -1.11
MAP1LC3B-208ENST00000570189 SMCPP49901 116 aaPredicted RBP8.1□□□□□ -1.11
MAP1LC3B-208ENST00000570189 CASC2Q6XLA1 102 aa8.09□□□□□ -1.11
MAP1LC3B-208ENST00000570189 KRTAP19-6Q3LI70 58 aa8.08□□□□□ -1.12
MAP1LC3B-208ENST00000570189 IGKV2D-30A0A075B6S6 120 aa8.07□□□□□ -1.12
MAP1LC3B-208ENST00000570189 IGKV2-30P06310 120 aa8.07□□□□□ -1.12
MAP1LC3B-208ENST00000570189 CXCL6P80162 114 aa8.06□□□□□ -1.12
MAP1LC3B-208ENST00000570189 Q8N9L7 120 aa8.06□□□□□ -1.12
MAP1LC3B-208ENST00000570189 LINC00846Q9NV44 126 aa8.06□□□□□ -1.12
MAP1LC3B-208ENST00000570189 PRO0461Q9UI25 63 aa8.05□□□□□ -1.12
MAP1LC3B-208ENST00000570189 HCG22E2RYF7 251 aa8.04□□□□□ -1.12
MAP1LC3B-208ENST00000570189 COL5A1-AS1Q5SY13 56 aa8.01□□□□□ -1.13
MAP1LC3B-208ENST00000570189 UBL5Q9BZL1 73 aa8.01□□□□□ -1.13
MAP1LC3B-208ENST00000570189 K7EP34 96 aa7.98□□□□□ -1.13
MAP1LC3B-208ENST00000570189 C4orf26Q17RF5 130 aa7.95□□□□□ -1.14
MAP1LC3B-208ENST00000570189 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.14
MAP1LC3B-208ENST00000570189 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
MAP1LC3B-208ENST00000570189 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
MAP1LC3B-208ENST00000570189 F8W1H4 67 aa7.86□□□□□ -1.15
MAP1LC3B-208ENST00000570189 S4R3F8 94 aa7.83□□□□□ -1.16
MAP1LC3B-208ENST00000570189 MACF1Q9UPN3 7388 aaKnown RBP7.82□□□□□ -1.16
MAP1LC3B-208ENST00000570189 C1orf64Q8NEQ6 169 aa7.82□□□□□ -1.16
MAP1LC3B-208ENST00000570189 C5orf47Q569G3 176 aa7.81□□□□□ -1.16
MAP1LC3B-208ENST00000570189 CSAG1Q6PB30 78 aa7.8□□□□□ -1.16
MAP1LC3B-208ENST00000570189 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
MAP1LC3B-208ENST00000570189 LCA10Q71F78 164 aa7.78□□□□□ -1.16
MAP1LC3B-208ENST00000570189 SPRR2GQ9BYE4 73 aa7.75□□□□□ -1.17
MAP1LC3B-208ENST00000570189 FAM236AA0A1B0GUQ0 79 aa7.74□□□□□ -1.17
MAP1LC3B-208ENST00000570189 FAM236BA0A1B0GV22 79 aa7.74□□□□□ -1.17
MAP1LC3B-208ENST00000570189 SYNE2Q8WXH0 6885 aaKnown RBP7.73□□□□□ -1.17
MAP1LC3B-208ENST00000570189 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
MAP1LC3B-208ENST00000570189 KRTAP6-3Q3LI67 103 aa7.72□□□□□ -1.17
MAP1LC3B-208ENST00000570189 CYP4F30PQ9H0H9 118 aa7.72□□□□□ -1.17
MAP1LC3B-208ENST00000570189 ACYP1P07311 99 aa7.7□□□□□ -1.18
MAP1LC3B-208ENST00000570189 MT1BP07438 61 aa7.7□□□□□ -1.18
MAP1LC3B-208ENST00000570189 TRAV22A0A0B4J277 110 aa7.68□□□□□ -1.18
MAP1LC3B-208ENST00000570189 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
MAP1LC3B-208ENST00000570189 FAM240AA0A1B0GVK7 77 aa7.67□□□□□ -1.18
MAP1LC3B-208ENST00000570189 KLKP1Q107X0 134 aa7.66□□□□□ -1.18
MAP1LC3B-208ENST00000570189 ATP5EP2Q5VTU8 51 aa7.66□□□□□ -1.18
MAP1LC3B-208ENST00000570189 Q5VV11 94 aa7.66□□□□□ -1.18
MAP1LC3B-208ENST00000570189 PCP4L1A6NKN8 68 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms