RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 CHCHD1Q96BP2 118 aaKnown RBP1.61□□□□□ -2.15
CNOT1-221ENST00000569924 KRTAP4-1Q9BYQ7 146 aa1.61□□□□□ -2.15
CNOT1-221ENST00000569924 NXT2Q9NPJ8 142 aaKnown RBP1.61□□□□□ -2.15
CNOT1-221ENST00000569924 MUC12Q9UKN1 5478 aa1.61□□□□□ -2.15
CNOT1-221ENST00000569924 SPINK1P00995 79 aa1.6□□□□□ -2.15
CNOT1-221ENST00000569924 RPS29P62273 56 aaKnown RBP1.6□□□□□ -2.15
CNOT1-221ENST00000569924 COX17Q14061 63 aa1.6□□□□□ -2.15
CNOT1-221ENST00000569924 SPRR4Q96PI1 79 aa1.6□□□□□ -2.15
CNOT1-221ENST00000569924 ERG28Q9UKR5 140 aa1.6□□□□□ -2.15
CNOT1-221ENST00000569924 LINC01546A6NGU7 62 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 H3BRM9 83 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 J3QR89 54 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 UQCRQO14949 82 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 SPINK8P0C7L1 97 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 FABP4P15090 132 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 ADCYAP1P18509 176 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 KRTAP12-2P59991 146 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 SFTA2Q6UW10 78 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 FAM19A2Q8N3H0 131 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 CST9LQ9H4G1 147 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 NDUFA12Q9UI09 145 aa1.59□□□□□ -2.15
CNOT1-221ENST00000569924 A0A1B0GV90 55 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 hDV103S1A0JD37 113 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 LINC00587B1AMM8 73 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 HBDP02042 147 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 IGLC3P0DOY3 106 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 SPRR1AP35321 89 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 MT1HP80294 61 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 KRTAP19-2Q3LHN2 52 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 SSBP3-AS1Q7Z2R9 100 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 KCNQ1DNQ9H478 68 aa1.58□□□□□ -2.16
CNOT1-221ENST00000569924 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
CNOT1-221ENST00000569924 FLGP20930 4061 aaPredicted RBP1.57□□□□□ -2.16
CNOT1-221ENST00000569924 K7ERU9 68 aa1.57□□□□□ -2.16
CNOT1-221ENST00000569924 AKR1D1P51857 326 aa1.57□□□□□ -2.16
CNOT1-221ENST00000569924 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
CNOT1-221ENST00000569924 TMEM254Q8TBM7 123 aa1.57□□□□□ -2.16
CNOT1-221ENST00000569924 ZNF625Q96I27 306 aaPredicted RBP1.57□□□□□ -2.16
CNOT1-221ENST00000569924 TRAV12-1A0A0B4J245 112 aa1.56□□□□□ -2.16
CNOT1-221ENST00000569924 ETDCA0A1B0GVM5 59 aa1.56□□□□□ -2.16
CNOT1-221ENST00000569924 DLEU1O43261 78 aa1.56□□□□□ -2.16
CNOT1-221ENST00000569924 LINC00158P58513 81 aa1.56□□□□□ -2.16
CNOT1-221ENST00000569924 CLEC2BQ92478 149 aa1.56□□□□□ -2.16
CNOT1-221ENST00000569924 PRO0461Q9UI25 63 aa1.56□□□□□ -2.16
CNOT1-221ENST00000569924 A0A087WSZ3 146 aa1.55□□□□□ -2.16
CNOT1-221ENST00000569924 ERC2-IT1O76042 136 aa1.55□□□□□ -2.16
CNOT1-221ENST00000569924 TRACP01848 142 aa1.55□□□□□ -2.16
CNOT1-221ENST00000569924 Q1T7F1 81 aa1.55□□□□□ -2.16
CNOT1-221ENST00000569924 PCOTHQ58A44 107 aa1.55□□□□□ -2.16
CNOT1-221ENST00000569924 TEN1Q86WV5 123 aa1.55□□□□□ -2.16
CNOT1-221ENST00000569924 RAB37Q96AX2 223 aa1.55□□□□□ -2.16
CNOT1-221ENST00000569924 SMCO4Q9NRQ5 59 aa1.55□□□□□ -2.16
CNOT1-221ENST00000569924 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
CNOT1-221ENST00000569924 LOC107984156A0A0G2JMH3 177 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 TRBV10-3A0A0K0K1G6 114 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 NCR3O14931 201 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 SMIM13P0DJ93 91 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 S100PP25815 95 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 TMEM170BQ5T4T1 132 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 Q6ZRX8 168 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 BAGE3Q86Y29 109 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 ARL17AQ8IVW1 177 aa1.54□□□□□ -2.16
CNOT1-221ENST00000569924 MYMXA0A1B0GTQ4 84 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 FAM236AA0A1B0GUQ0 79 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 FAM236BA0A1B0GV22 79 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 M0R2T5 61 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 SPRR1BP22528 89 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 S100A1P23297 94 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 MEIG1Q5JSS6 88 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 C9orf153Q5TBE3 101 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 C18orf32Q8TCD1 76 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 LIMD2Q9BT23 127 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 SEC11CQ9BY50 192 aa1.53□□□□□ -2.16
CNOT1-221ENST00000569924 TRAV23DV6A0A075B6W5 121 aa1.52□□□□□ -2.17
CNOT1-221ENST00000569924 TMEM218A2RU14 115 aa1.52□□□□□ -2.17
CNOT1-221ENST00000569924 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
CNOT1-221ENST00000569924 PMCHL1Q16048 86 aa1.52□□□□□ -2.17
CNOT1-221ENST00000569924 LCE1EQ5T753 118 aa1.52□□□□□ -2.17
CNOT1-221ENST00000569924 COX6B2Q6YFQ2 88 aa1.52□□□□□ -2.17
CNOT1-221ENST00000569924 RPL37P61927 97 aaKnown RBP1.51□□□□□ -2.17
CNOT1-221ENST00000569924 CLLU1Q5K131 121 aa1.51□□□□□ -2.17
CNOT1-221ENST00000569924 S100A7L2Q5SY68 101 aa1.51□□□□□ -2.17
CNOT1-221ENST00000569924 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
CNOT1-221ENST00000569924 IFI27L1Q96BM0 104 aa1.51□□□□□ -2.17
CNOT1-221ENST00000569924 TRBV20-1A0A075B6N2 111 aa1.5□□□□□ -2.17
CNOT1-221ENST00000569924 A6NN06 94 aa1.5□□□□□ -2.17
CNOT1-221ENST00000569924 IGKV4-1P06312 121 aa1.5□□□□□ -2.17
CNOT1-221ENST00000569924 PLNP26678 52 aa1.5□□□□□ -2.17
CNOT1-221ENST00000569924 CASC2Q6XLA1 102 aa1.5□□□□□ -2.17
CNOT1-221ENST00000569924 ATOH7Q8N100 152 aa1.5□□□□□ -2.17
CNOT1-221ENST00000569924 NAA38Q9BRA0 125 aaKnown RBP1.5□□□□□ -2.17
CNOT1-221ENST00000569924 PRO1933Q9H354 126 aa1.5□□□□□ -2.17
CNOT1-221ENST00000569924 TEX49A0A1B0GTD5 131 aa1.49□□□□□ -2.17
CNOT1-221ENST00000569924 ELOF1P60002 83 aaKnown RBP1.49□□□□□ -2.17
CNOT1-221ENST00000569924 COX7BP24311 80 aa1.48□□□□□ -2.17
CNOT1-221ENST00000569924 MIR22HGQ0VDD5 57 aa1.48□□□□□ -2.17
CNOT1-221ENST00000569924 COA5Q86WW8 74 aa1.48□□□□□ -2.17
CNOT1-221ENST00000569924 LINC00308Q8TCZ7 52 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms