RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 C9orf92A6NGG3 77 aa8.88□□□□□ -0.99
USB1-215ENST00000569252 KRTAP13-3Q3SY46 172 aa8.88□□□□□ -0.99
USB1-215ENST00000569252 ACYP1P07311 99 aa8.86□□□□□ -0.99
USB1-215ENST00000569252 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
USB1-215ENST00000569252 BPY2O14599 106 aa8.84□□□□□ -0.99
USB1-215ENST00000569252 Q6ZVQ6 151 aa8.84□□□□□ -0.99
USB1-215ENST00000569252 LINC00846Q9NV44 126 aa8.84□□□□□ -0.99
USB1-215ENST00000569252 J3QR89 54 aa8.83□□□□□ -1
USB1-215ENST00000569252 IGHV6-1A0A0B4J1U7 121 aa8.82□□□□□ -1
USB1-215ENST00000569252 LINC00313P59037 77 aa8.82□□□□□ -1
USB1-215ENST00000569252 A8MWP4 228 aa8.8□□□□□ -1
USB1-215ENST00000569252 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
USB1-215ENST00000569252 A0A1B0GVX0 72 aa8.79□□□□□ -1
USB1-215ENST00000569252 C8orf87E5RJ46 101 aa8.78□□□□□ -1
USB1-215ENST00000569252 A0A0U1RQV1 116 aa8.77□□□□□ -1.01
USB1-215ENST00000569252 DSCR10P59022 87 aa8.77□□□□□ -1.01
USB1-215ENST00000569252 XP32Q5T750 250 aa8.76□□□□□ -1.01
USB1-215ENST00000569252 PRR15Q8IV56 129 aa8.74□□□□□ -1.01
USB1-215ENST00000569252 IGKV3D-7A0A0C4DH55 119 aa8.73□□□□□ -1.01
USB1-215ENST00000569252 SEC61BP60468 96 aaKnown RBP8.73□□□□□ -1.01
USB1-215ENST00000569252 CXCL6P80162 114 aa8.7□□□□□ -1.02
USB1-215ENST00000569252 C8orf17Q9NRJ1 99 aa8.69□□□□□ -1.02
USB1-215ENST00000569252 K7EQZ3 153 aa8.68□□□□□ -1.02
USB1-215ENST00000569252 K7ERU9 68 aa8.67□□□□□ -1.02
USB1-215ENST00000569252 ATP11AUNQ6ZP68 121 aa8.67□□□□□ -1.02
USB1-215ENST00000569252 NOTCH2NLQ7Z3S9 236 aa8.67□□□□□ -1.02
USB1-215ENST00000569252 RPL37P61927 97 aaKnown RBP8.66□□□□□ -1.02
USB1-215ENST00000569252 Q75L30 129 aa8.66□□□□□ -1.02
USB1-215ENST00000569252 ATP5EP2Q5VTU8 51 aa8.65□□□□□ -1.02
USB1-215ENST00000569252 FSIP2Q5CZC0 6907 aa8.65□□□□□ -1.03
USB1-215ENST00000569252 LINC00643Q86TS7 51 aa8.64□□□□□ -1.03
USB1-215ENST00000569252 Q8N9L7 120 aa8.64□□□□□ -1.03
USB1-215ENST00000569252 C20orf166-AS1Q96NR2 134 aa8.64□□□□□ -1.03
USB1-215ENST00000569252 hDV103S1A0JD37 113 aa8.63□□□□□ -1.03
USB1-215ENST00000569252 A8MUU9 505 aa8.62□□□□□ -1.03
USB1-215ENST00000569252 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
USB1-215ENST00000569252 PCOTHQ58A44 107 aa8.6□□□□□ -1.03
USB1-215ENST00000569252 TMEM254Q8TBM7 123 aa8.6□□□□□ -1.03
USB1-215ENST00000569252 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
USB1-215ENST00000569252 CASC2Q6XLA1 102 aa8.59□□□□□ -1.03
USB1-215ENST00000569252 MRPL34Q9BQ48 92 aaKnown RBP8.59□□□□□ -1.03
USB1-215ENST00000569252 NDUFS5O43920 106 aa8.58□□□□□ -1.04
USB1-215ENST00000569252 HIST1H4AP62805 103 aaKnown RBP8.58□□□□□ -1.04
USB1-215ENST00000569252 WFDC13Q8IUB5 93 aa8.58□□□□□ -1.04
USB1-215ENST00000569252 HCG22E2RYF7 251 aa8.57□□□□□ -1.04
USB1-215ENST00000569252 KRTAP4-1Q9BYQ7 146 aa8.56□□□□□ -1.04
USB1-215ENST00000569252 Q8N9P0 234 aaPredicted RBP8.55□□□□□ -1.04
USB1-215ENST00000569252 ZCCHC13Q8WW36 166 aaKnown RBP8.48□□□□□ -1.05
USB1-215ENST00000569252 CRCT1Q9UGL9 99 aa8.48□□□□□ -1.05
USB1-215ENST00000569252 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
USB1-215ENST00000569252 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
USB1-215ENST00000569252 A0A087WVE0 104 aa8.4□□□□□ -1.06
USB1-215ENST00000569252 IMUPQ9GZP8 106 aa8.4□□□□□ -1.06
USB1-215ENST00000569252 MT-ATP8P03928 68 aa8.36□□□□□ -1.07
USB1-215ENST00000569252 SCGB1A1P11684 91 aa8.36□□□□□ -1.07
USB1-215ENST00000569252 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
USB1-215ENST00000569252 SPINK7P58062 85 aa8.33□□□□□ -1.08
USB1-215ENST00000569252 Q5W150 140 aa8.31□□□□□ -1.08
USB1-215ENST00000569252 UQCRQO14949 82 aa8.3□□□□□ -1.08
USB1-215ENST00000569252 IGKV2D-30A0A075B6S6 120 aa8.28□□□□□ -1.08
USB1-215ENST00000569252 IGKV2-30P06310 120 aa8.28□□□□□ -1.08
USB1-215ENST00000569252 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
USB1-215ENST00000569252 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
USB1-215ENST00000569252 COX6B2Q6YFQ2 88 aa8.26□□□□□ -1.09
USB1-215ENST00000569252 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
USB1-215ENST00000569252 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
USB1-215ENST00000569252 MT1HP80294 61 aa8.25□□□□□ -1.09
USB1-215ENST00000569252 ATOX1O00244 68 aa8.23□□□□□ -1.09
USB1-215ENST00000569252 FAM236DA0A1B0GTK5 79 aa8.22□□□□□ -1.09
USB1-215ENST00000569252 FAM236CP0DP71 79 aa8.22□□□□□ -1.09
USB1-215ENST00000569252 FAM236AA0A1B0GUQ0 79 aa8.21□□□□□ -1.1
USB1-215ENST00000569252 FAM236BA0A1B0GV22 79 aa8.21□□□□□ -1.1
USB1-215ENST00000569252 H0Y9P7 68 aa8.21□□□□□ -1.1
USB1-215ENST00000569252 MP68P56378 58 aa8.21□□□□□ -1.1
USB1-215ENST00000569252 SMIM20Q8N5G0 67 aa8.2□□□□□ -1.1
USB1-215ENST00000569252 C5orf47Q569G3 176 aa8.19□□□□□ -1.1
USB1-215ENST00000569252 OCR1Q9BZK8 76 aa8.19□□□□□ -1.1
USB1-215ENST00000569252 HRES1P13985 223 aa8.18□□□□□ -1.1
USB1-215ENST00000569252 LOC101927531A0A1B0GV80 90 aa8.17□□□□□ -1.1
USB1-215ENST00000569252 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
USB1-215ENST00000569252 C1orf64Q8NEQ6 169 aa8.14□□□□□ -1.11
USB1-215ENST00000569252 KRTAP10-6P60371 365 aaPredicted RBP8.13□□□□□ -1.11
USB1-215ENST00000569252 LINC00208Q96KT6 92 aa8.13□□□□□ -1.11
USB1-215ENST00000569252 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
USB1-215ENST00000569252 FLGP20930 4061 aaPredicted RBP8.11□□□□□ -1.11
USB1-215ENST00000569252 TRAV7A0A075B6U4 112 aa8.11□□□□□ -1.11
USB1-215ENST00000569252 H3BPC8 53 aa8.11□□□□□ -1.11
USB1-215ENST00000569252 MPLKIPQ8TAP9 179 aa8.1□□□□□ -1.11
USB1-215ENST00000569252 C4orf26Q17RF5 130 aa8.06□□□□□ -1.12
USB1-215ENST00000569252 M0R2T5 61 aa8.04□□□□□ -1.12
USB1-215ENST00000569252 SERP2Q8N6R1 65 aa8.01□□□□□ -1.13
USB1-215ENST00000569252 H1FX-AS1Q4G0G2 97 aa7.99□□□□□ -1.13
USB1-215ENST00000569252 KRTAP9-7A8MTY7 169 aa7.95□□□□□ -1.14
USB1-215ENST00000569252 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
USB1-215ENST00000569252 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
USB1-215ENST00000569252 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
USB1-215ENST00000569252 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
USB1-215ENST00000569252 USH2AO75445 5202 aa7.89□□□□□ -1.15
USB1-215ENST00000569252 COX7CP15954 63 aa7.89□□□□□ -1.15
USB1-215ENST00000569252 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms