RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 C8orf87E5RJ46 101 aa10.24□□□□□ -0.77
ABCA3-206ENST00000569062 JMJD7-PLA2G4BH0Y9G9 81 aa10.24□□□□□ -0.77
ABCA3-206ENST00000569062 C21orf62-AS1Q17RA5 79 aa10.23□□□□□ -0.77
ABCA3-206ENST00000569062 TSTD3H0UI37 97 aa10.22□□□□□ -0.77
ABCA3-206ENST00000569062 BATFQ16520 125 aa10.22□□□□□ -0.77
ABCA3-206ENST00000569062 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.77
ABCA3-206ENST00000569062 J3KT08 172 aa10.21□□□□□ -0.77
ABCA3-206ENST00000569062 CRCT1Q9UGL9 99 aa10.2□□□□□ -0.78
ABCA3-206ENST00000569062 C14orf132Q9NPU4 83 aa10.19□□□□□ -0.78
ABCA3-206ENST00000569062 LYRM7Q5U5X0 104 aa10.17□□□□□ -0.78
ABCA3-206ENST00000569062 LOC105371267A0A1B0GV96 52 aa10.16□□□□□ -0.78
ABCA3-206ENST00000569062 A0A1B0GW54 56 aa10.15□□□□□ -0.78
ABCA3-206ENST00000569062 HRES1P13985 223 aa10.15□□□□□ -0.78
ABCA3-206ENST00000569062 PDE6GP18545 87 aa10.14□□□□□ -0.79
ABCA3-206ENST00000569062 NDUFB1O75438 58 aa10.13□□□□□ -0.79
ABCA3-206ENST00000569062 MPLKIPQ8TAP9 179 aa10.13□□□□□ -0.79
ABCA3-206ENST00000569062 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
ABCA3-206ENST00000569062 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
ABCA3-206ENST00000569062 A8MWP4 228 aa10.1□□□□□ -0.79
ABCA3-206ENST00000569062 ZCCHC13Q8WW36 166 aaKnown RBP10.1□□□□□ -0.79
ABCA3-206ENST00000569062 IGKV3D-7A0A0C4DH55 119 aa10.09□□□□□ -0.79
ABCA3-206ENST00000569062 C9orf118A6NHY6 69 aa10.09□□□□□ -0.79
ABCA3-206ENST00000569062 C8orf17Q9NRJ1 99 aa10.09□□□□□ -0.79
ABCA3-206ENST00000569062 RBM12B-AS1Q9P1G2 102 aa10.09□□□□□ -0.79
ABCA3-206ENST00000569062 TAX1BP3O14907 124 aa10.08□□□□□ -0.8
ABCA3-206ENST00000569062 Q8N9P0 234 aaPredicted RBP10.08□□□□□ -0.8
ABCA3-206ENST00000569062 KRTAP9-8Q9BYQ0 159 aa10.07□□□□□ -0.8
ABCA3-206ENST00000569062 A0A1W2PPM0 123 aa10.06□□□□□ -0.8
ABCA3-206ENST00000569062 MTURNQ8N3F0 131 aa10.06□□□□□ -0.8
ABCA3-206ENST00000569062 NREPQ16612 68 aa10.05□□□□□ -0.8
ABCA3-206ENST00000569062 H3BT86 120 aa10.03□□□□□ -0.8
ABCA3-206ENST00000569062 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
ABCA3-206ENST00000569062 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
ABCA3-206ENST00000569062 SPINK7P58062 85 aa10.01□□□□□ -0.81
ABCA3-206ENST00000569062 PRR15Q8IV56 129 aa10.01□□□□□ -0.81
ABCA3-206ENST00000569062 Q6ZVQ6 151 aa10□□□□□ -0.81
ABCA3-206ENST00000569062 MMP24-AS1A0A0U1RRL7 71 aa9.95□□□□□ -0.82
ABCA3-206ENST00000569062 K7EQZ3 153 aa9.93□□□□□ -0.82
ABCA3-206ENST00000569062 MT2AP02795 61 aa9.92□□□□□ -0.82
ABCA3-206ENST00000569062 TMEM254Q8TBM7 123 aa9.92□□□□□ -0.82
ABCA3-206ENST00000569062 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
ABCA3-206ENST00000569062 SPCS1Q9Y6A9 102 aa9.92□□□□□ -0.82
ABCA3-206ENST00000569062 WFDC13Q8IUB5 93 aa9.88□□□□□ -0.83
ABCA3-206ENST00000569062 hDV103S1A0JD37 113 aa9.87□□□□□ -0.83
ABCA3-206ENST00000569062 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
ABCA3-206ENST00000569062 BPY2O14599 106 aa9.86□□□□□ -0.83
ABCA3-206ENST00000569062 MT1FP04733 61 aa9.85□□□□□ -0.83
ABCA3-206ENST00000569062 NDUFS5O43920 106 aa9.83□□□□□ -0.84
ABCA3-206ENST00000569062 USH2AO75445 5202 aa9.81□□□□□ -0.84
ABCA3-206ENST00000569062 COL5A1-AS1Q5SY13 56 aa9.8□□□□□ -0.84
ABCA3-206ENST00000569062 Q8N9L7 120 aa9.8□□□□□ -0.84
ABCA3-206ENST00000569062 KRTAP10-10P60014 251 aa9.78□□□□□ -0.84
ABCA3-206ENST00000569062 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
ABCA3-206ENST00000569062 Q5W150 140 aa9.75□□□□□ -0.85
ABCA3-206ENST00000569062 K7EP34 96 aa9.74□□□□□ -0.85
ABCA3-206ENST00000569062 KRTAP9-3Q9BYQ3 159 aa9.74□□□□□ -0.85
ABCA3-206ENST00000569062 CASC2Q6XLA1 102 aa9.73□□□□□ -0.85
ABCA3-206ENST00000569062 SSPOA2VEC9 5147 aa9.73□□□□□ -0.85
ABCA3-206ENST00000569062 LCE2BO14633 110 aa9.72□□□□□ -0.85
ABCA3-206ENST00000569062 LINC00846Q9NV44 126 aa9.72□□□□□ -0.85
ABCA3-206ENST00000569062 IGKV2D-30A0A075B6S6 120 aa9.7□□□□□ -0.86
ABCA3-206ENST00000569062 IGKV2-30P06310 120 aa9.7□□□□□ -0.86
ABCA3-206ENST00000569062 HCG22E2RYF7 251 aa9.69□□□□□ -0.86
ABCA3-206ENST00000569062 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
ABCA3-206ENST00000569062 C7orf65Q6ZTY9 151 aa9.66□□□□□ -0.86
ABCA3-206ENST00000569062 H1FX-AS1Q4G0G2 97 aa9.65□□□□□ -0.86
ABCA3-206ENST00000569062 PCP4L1A6NKN8 68 aa9.59□□□□□ -0.87
ABCA3-206ENST00000569062 CXCL6P80162 114 aa9.59□□□□□ -0.87
ABCA3-206ENST00000569062 GTF2H5Q6ZYL4 71 aa9.59□□□□□ -0.87
ABCA3-206ENST00000569062 F8W1H4 67 aa9.55□□□□□ -0.88
ABCA3-206ENST00000569062 KRTAP9-7A8MTY7 169 aa9.54□□□□□ -0.88
ABCA3-206ENST00000569062 C4orf26Q17RF5 130 aa9.54□□□□□ -0.88
ABCA3-206ENST00000569062 KRTAP19-1Q8IUB9 90 aa9.54□□□□□ -0.88
ABCA3-206ENST00000569062 ETDBQ3ZM63 59 aa9.53□□□□□ -0.88
ABCA3-206ENST00000569062 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.51□□□□□ -0.89
ABCA3-206ENST00000569062 FCGBPQ9Y6R7 5405 aaPredicted RBP9.49□□□□□ -0.89
ABCA3-206ENST00000569062 KRTAP3-1Q9BYR8 98 aa9.42□□□□□ -0.9
ABCA3-206ENST00000569062 TP53AIP1Q9HCN2 124 aa9.4□□□□□ -0.9
ABCA3-206ENST00000569062 KRTAP19-6Q3LI70 58 aa9.35□□□□□ -0.91
ABCA3-206ENST00000569062 C5orf47Q569G3 176 aa9.35□□□□□ -0.91
ABCA3-206ENST00000569062 C1orf64Q8NEQ6 169 aa9.35□□□□□ -0.91
ABCA3-206ENST00000569062 S4R3F8 94 aa9.32□□□□□ -0.92
ABCA3-206ENST00000569062 ACYP1P07311 99 aa9.29□□□□□ -0.92
ABCA3-206ENST00000569062 LCA10Q71F78 164 aa9.27□□□□□ -0.93
ABCA3-206ENST00000569062 CYP4F30PQ9H0H9 118 aa9.25□□□□□ -0.93
ABCA3-206ENST00000569062 FAM240AA0A1B0GVK7 77 aa9.24□□□□□ -0.93
ABCA3-206ENST00000569062 TRAV22A0A0B4J277 110 aa9.22□□□□□ -0.93
ABCA3-206ENST00000569062 CSAG1Q6PB30 78 aa9.22□□□□□ -0.93
ABCA3-206ENST00000569062 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.94
ABCA3-206ENST00000569062 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.94
ABCA3-206ENST00000569062 HIST1H4AP62805 103 aaKnown RBP9.2□□□□□ -0.94
ABCA3-206ENST00000569062 ATP5EP2Q5VTU8 51 aa9.2□□□□□ -0.94
ABCA3-206ENST00000569062 MACF1Q9UPN3 7388 aaKnown RBP9.19□□□□□ -0.94
ABCA3-206ENST00000569062 LOC101927531A0A1B0GV80 90 aa9.16□□□□□ -0.94
ABCA3-206ENST00000569062 A0A087WVE0 104 aa9.13□□□□□ -0.95
ABCA3-206ENST00000569062 SYNE2Q8WXH0 6885 aaKnown RBP9.11□□□□□ -0.95
ABCA3-206ENST00000569062 UQCRQO14949 82 aa9.1□□□□□ -0.95
ABCA3-206ENST00000569062 H0Y9P7 68 aa9.09□□□□□ -0.95
ABCA3-206ENST00000569062 LINC00643Q86TS7 51 aa9.07□□□□□ -0.96
ABCA3-206ENST00000569062 A0A1B0GV90 55 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1210.3 ms