RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 VPS25Q9BRG1 176 aa9.42□□□□□ -0.9
SPSB3-210ENST00000568416 SCGB1C2P0DMR2 95 aa9.39□□□□□ -0.91
SPSB3-210ENST00000568416 DSCR8Q96T75 97 aa9.39□□□□□ -0.91
SPSB3-210ENST00000568416 SSPOA2VEC9 5147 aa9.36□□□□□ -0.91
SPSB3-210ENST00000568416 J3KT08 172 aa9.35□□□□□ -0.91
SPSB3-210ENST00000568416 MT1FP04733 61 aa9.35□□□□□ -0.91
SPSB3-210ENST00000568416 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
SPSB3-210ENST00000568416 C21orf62-AS1Q17RA5 79 aa9.35□□□□□ -0.91
SPSB3-210ENST00000568416 C9JAW5 83 aa9.33□□□□□ -0.92
SPSB3-210ENST00000568416 ZCCHC13Q8WW36 166 aaKnown RBP9.33□□□□□ -0.92
SPSB3-210ENST00000568416 Q6ZQT0 140 aa9.32□□□□□ -0.92
SPSB3-210ENST00000568416 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.31□□□□□ -0.92
SPSB3-210ENST00000568416 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
SPSB3-210ENST00000568416 LCE2BO14633 110 aa9.28□□□□□ -0.92
SPSB3-210ENST00000568416 SPINK7P58062 85 aa9.28□□□□□ -0.92
SPSB3-210ENST00000568416 Q8N9P0 234 aaPredicted RBP9.28□□□□□ -0.92
SPSB3-210ENST00000568416 KRTAP9-3Q9BYQ3 159 aa9.28□□□□□ -0.92
SPSB3-210ENST00000568416 KRTAP10-10P60014 251 aa9.27□□□□□ -0.93
SPSB3-210ENST00000568416 MTURNQ8N3F0 131 aa9.27□□□□□ -0.93
SPSB3-210ENST00000568416 NDUFB1O75438 58 aa9.26□□□□□ -0.93
SPSB3-210ENST00000568416 JMJD7-PLA2G4BH0Y9G9 81 aa9.23□□□□□ -0.93
SPSB3-210ENST00000568416 ATXN8Q156A1 80 aa9.23□□□□□ -0.93
SPSB3-210ENST00000568416 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
SPSB3-210ENST00000568416 LOC110117498A0A087WWA1 95 aa9.22□□□□□ -0.93
SPSB3-210ENST00000568416 A0A1B0GW54 56 aa9.22□□□□□ -0.93
SPSB3-210ENST00000568416 A8MWP4 228 aa9.22□□□□□ -0.93
SPSB3-210ENST00000568416 NAA38Q9BRA0 125 aaKnown RBP9.21□□□□□ -0.94
SPSB3-210ENST00000568416 IGKV3D-7A0A0C4DH55 119 aa9.2□□□□□ -0.94
SPSB3-210ENST00000568416 M0R143 59 aa9.19□□□□□ -0.94
SPSB3-210ENST00000568416 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
SPSB3-210ENST00000568416 PDE6GP18545 87 aa9.17□□□□□ -0.94
SPSB3-210ENST00000568416 FCGBPQ9Y6R7 5405 aaPredicted RBP9.17□□□□□ -0.94
SPSB3-210ENST00000568416 LYRM7Q5U5X0 104 aa9.14□□□□□ -0.95
SPSB3-210ENST00000568416 Q6ZVQ6 151 aa9.14□□□□□ -0.95
SPSB3-210ENST00000568416 WFDC13Q8IUB5 93 aa9.14□□□□□ -0.95
SPSB3-210ENST00000568416 C14orf132Q9NPU4 83 aa9.14□□□□□ -0.95
SPSB3-210ENST00000568416 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
SPSB3-210ENST00000568416 NREPQ16612 68 aa9.09□□□□□ -0.95
SPSB3-210ENST00000568416 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
SPSB3-210ENST00000568416 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
SPSB3-210ENST00000568416 MRPL34Q9BQ48 92 aaKnown RBP9.07□□□□□ -0.96
SPSB3-210ENST00000568416 K7EQZ3 153 aa9□□□□□ -0.97
SPSB3-210ENST00000568416 SMIM6P0DI80 62 aa9□□□□□ -0.97
SPSB3-210ENST00000568416 hDV103S1A0JD37 113 aa8.99□□□□□ -0.97
SPSB3-210ENST00000568416 KRTAP19-6Q3LI70 58 aa8.99□□□□□ -0.97
SPSB3-210ENST00000568416 H1FX-AS1Q4G0G2 97 aa8.97□□□□□ -0.97
SPSB3-210ENST00000568416 H3BT86 120 aa8.96□□□□□ -0.98
SPSB3-210ENST00000568416 LINC00846Q9NV44 126 aa8.96□□□□□ -0.98
SPSB3-210ENST00000568416 MACF1Q9UPN3 7388 aaKnown RBP8.96□□□□□ -0.98
SPSB3-210ENST00000568416 NDUFS5O43920 106 aa8.95□□□□□ -0.98
SPSB3-210ENST00000568416 BATFQ16520 125 aa8.95□□□□□ -0.98
SPSB3-210ENST00000568416 C9orf118A6NHY6 69 aa8.91□□□□□ -0.98
SPSB3-210ENST00000568416 TSTD3H0UI37 97 aa8.91□□□□□ -0.98
SPSB3-210ENST00000568416 BPY2O14599 106 aa8.91□□□□□ -0.98
SPSB3-210ENST00000568416 Q5W150 140 aa8.9□□□□□ -0.98
SPSB3-210ENST00000568416 IGKV2D-30A0A075B6S6 120 aa8.89□□□□□ -0.99
SPSB3-210ENST00000568416 IGKV2-30P06310 120 aa8.89□□□□□ -0.99
SPSB3-210ENST00000568416 A0A1W2PPM0 123 aa8.88□□□□□ -0.99
SPSB3-210ENST00000568416 TAX1BP3O14907 124 aa8.88□□□□□ -0.99
SPSB3-210ENST00000568416 C7orf65Q6ZTY9 151 aa8.88□□□□□ -0.99
SPSB3-210ENST00000568416 SYNE2Q8WXH0 6885 aaKnown RBP8.86□□□□□ -0.99
SPSB3-210ENST00000568416 CASC2Q6XLA1 102 aa8.83□□□□□ -1
SPSB3-210ENST00000568416 Q8N9L7 120 aa8.83□□□□□ -1
SPSB3-210ENST00000568416 HCG22E2RYF7 251 aa8.81□□□□□ -1
SPSB3-210ENST00000568416 C4orf26Q17RF5 130 aa8.76□□□□□ -1.01
SPSB3-210ENST00000568416 CXCL6P80162 114 aa8.75□□□□□ -1.01
SPSB3-210ENST00000568416 SMCPP49901 116 aaPredicted RBP8.74□□□□□ -1.01
SPSB3-210ENST00000568416 SPCS1Q9Y6A9 102 aa8.73□□□□□ -1.01
SPSB3-210ENST00000568416 LOC105371267A0A1B0GV96 52 aa8.7□□□□□ -1.02
SPSB3-210ENST00000568416 KRTAP3-1Q9BYR8 98 aa8.67□□□□□ -1.02
SPSB3-210ENST00000568416 KRTAP6-3Q3LI67 103 aa8.66□□□□□ -1.02
SPSB3-210ENST00000568416 UBL5Q9BZL1 73 aa8.66□□□□□ -1.02
SPSB3-210ENST00000568416 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
SPSB3-210ENST00000568416 PRO0461Q9UI25 63 aa8.64□□□□□ -1.03
SPSB3-210ENST00000568416 S4R3F8 94 aa8.6□□□□□ -1.03
SPSB3-210ENST00000568416 FAM236AA0A1B0GUQ0 79 aa8.58□□□□□ -1.04
SPSB3-210ENST00000568416 FAM236BA0A1B0GV22 79 aa8.58□□□□□ -1.04
SPSB3-210ENST00000568416 C1orf64Q8NEQ6 169 aa8.58□□□□□ -1.04
SPSB3-210ENST00000568416 K7EP34 96 aa8.56□□□□□ -1.04
SPSB3-210ENST00000568416 MT1BP07438 61 aa8.55□□□□□ -1.04
SPSB3-210ENST00000568416 COL5A1-AS1Q5SY13 56 aa8.55□□□□□ -1.04
SPSB3-210ENST00000568416 CSAG1Q6PB30 78 aa8.55□□□□□ -1.04
SPSB3-210ENST00000568416 LCA10Q71F78 164 aa8.55□□□□□ -1.04
SPSB3-210ENST00000568416 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
SPSB3-210ENST00000568416 SPRR2GQ9BYE4 73 aa8.52□□□□□ -1.05
SPSB3-210ENST00000568416 KRTAP19-8Q3LI54 63 aa8.51□□□□□ -1.05
SPSB3-210ENST00000568416 Q5VV11 94 aa8.49□□□□□ -1.05
SPSB3-210ENST00000568416 A6NN06 94 aa8.48□□□□□ -1.05
SPSB3-210ENST00000568416 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
SPSB3-210ENST00000568416 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
SPSB3-210ENST00000568416 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.06
SPSB3-210ENST00000568416 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
SPSB3-210ENST00000568416 F8W1H4 67 aa8.38□□□□□ -1.07
SPSB3-210ENST00000568416 KRTAP10-5P60370 271 aa8.38□□□□□ -1.07
SPSB3-210ENST00000568416 NEBP20929 6669 aa8.37□□□□□ -1.07
SPSB3-210ENST00000568416 ETDBQ3ZM63 59 aa8.37□□□□□ -1.07
SPSB3-210ENST00000568416 A0A087WVE0 104 aa8.34□□□□□ -1.07
SPSB3-210ENST00000568416 TRAV22A0A0B4J277 110 aa8.32□□□□□ -1.08
SPSB3-210ENST00000568416 LOC101927531A0A1B0GV80 90 aa8.31□□□□□ -1.08
SPSB3-210ENST00000568416 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms