RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 NOTCH2NLQ7Z3S9 236 aa9.71□□□□□ -0.86
COMMD4-222ENST00000568034 Q6ZVQ6 151 aa9.7□□□□□ -0.86
COMMD4-222ENST00000568034 LINC00846Q9NV44 126 aa9.7□□□□□ -0.86
COMMD4-222ENST00000568034 MUC2Q02817 5179 aa9.7□□□□□ -0.86
COMMD4-222ENST00000568034 A0A1B0GVX0 72 aa9.69□□□□□ -0.86
COMMD4-222ENST00000568034 FAM240AA0A1B0GVK7 77 aa9.68□□□□□ -0.86
COMMD4-222ENST00000568034 RPL37P61927 97 aaKnown RBP9.68□□□□□ -0.86
COMMD4-222ENST00000568034 IGHV6-1A0A0B4J1U7 121 aa9.67□□□□□ -0.86
COMMD4-222ENST00000568034 KRTAP16-1A8MUX0 517 aa9.67□□□□□ -0.86
COMMD4-222ENST00000568034 A8MWP4 228 aa9.67□□□□□ -0.86
COMMD4-222ENST00000568034 ACYP1P07311 99 aa9.67□□□□□ -0.86
COMMD4-222ENST00000568034 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
COMMD4-222ENST00000568034 LINC00313P59037 77 aa9.66□□□□□ -0.86
COMMD4-222ENST00000568034 SEC61BP60468 96 aaKnown RBP9.65□□□□□ -0.86
COMMD4-222ENST00000568034 Q75L30 129 aa9.64□□□□□ -0.87
COMMD4-222ENST00000568034 C8orf87E5RJ46 101 aa9.63□□□□□ -0.87
COMMD4-222ENST00000568034 C20orf166-AS1Q96NR2 134 aa9.63□□□□□ -0.87
COMMD4-222ENST00000568034 A8MUU9 505 aa9.62□□□□□ -0.87
COMMD4-222ENST00000568034 BPY2O14599 106 aa9.61□□□□□ -0.87
COMMD4-222ENST00000568034 NDUFB1O75438 58 aa9.61□□□□□ -0.87
COMMD4-222ENST00000568034 PCOTHQ58A44 107 aa9.61□□□□□ -0.87
COMMD4-222ENST00000568034 PRR15Q8IV56 129 aa9.61□□□□□ -0.87
COMMD4-222ENST00000568034 KRTAP4-1Q9BYQ7 146 aa9.61□□□□□ -0.87
COMMD4-222ENST00000568034 UBL5Q9BZL1 73 aa9.61□□□□□ -0.87
COMMD4-222ENST00000568034 K7EQZ3 153 aa9.59□□□□□ -0.87
COMMD4-222ENST00000568034 C8orf17Q9NRJ1 99 aa9.58□□□□□ -0.88
COMMD4-222ENST00000568034 MMP24-AS1A0A0U1RRL7 71 aa9.54□□□□□ -0.88
COMMD4-222ENST00000568034 Q8N9L7 120 aa9.54□□□□□ -0.88
COMMD4-222ENST00000568034 SCGB1A1P11684 91 aa9.49□□□□□ -0.89
COMMD4-222ENST00000568034 MT-ATP8P03928 68 aa9.48□□□□□ -0.89
COMMD4-222ENST00000568034 ATP11AUNQ6ZP68 121 aa9.48□□□□□ -0.89
COMMD4-222ENST00000568034 LINC00643Q86TS7 51 aa9.48□□□□□ -0.89
COMMD4-222ENST00000568034 Q8N9P0 234 aaPredicted RBP9.48□□□□□ -0.89
COMMD4-222ENST00000568034 CXCL6P80162 114 aa9.47□□□□□ -0.89
COMMD4-222ENST00000568034 FAT4Q6V0I7 4981 aa9.46□□□□□ -0.9
COMMD4-222ENST00000568034 TMEM254Q8TBM7 123 aa9.45□□□□□ -0.9
COMMD4-222ENST00000568034 hDV103S1A0JD37 113 aa9.44□□□□□ -0.9
COMMD4-222ENST00000568034 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
COMMD4-222ENST00000568034 ATP5EP2Q5VTU8 51 aa9.4□□□□□ -0.9
COMMD4-222ENST00000568034 WFDC13Q8IUB5 93 aa9.4□□□□□ -0.9
COMMD4-222ENST00000568034 PCP4P48539 62 aa9.39□□□□□ -0.91
COMMD4-222ENST00000568034 IMUPQ9GZP8 106 aa9.39□□□□□ -0.91
COMMD4-222ENST00000568034 CASC2Q6XLA1 102 aa9.38□□□□□ -0.91
COMMD4-222ENST00000568034 ZCCHC13Q8WW36 166 aaKnown RBP9.37□□□□□ -0.91
COMMD4-222ENST00000568034 HCG22E2RYF7 251 aa9.36□□□□□ -0.91
COMMD4-222ENST00000568034 KRTAP19-2Q3LHN2 52 aa9.34□□□□□ -0.91
COMMD4-222ENST00000568034 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
COMMD4-222ENST00000568034 NDUFS5O43920 106 aa9.29□□□□□ -0.92
COMMD4-222ENST00000568034 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
COMMD4-222ENST00000568034 Q5W150 140 aa9.25□□□□□ -0.93
COMMD4-222ENST00000568034 HIST1H4AP62805 103 aaKnown RBP9.24□□□□□ -0.93
COMMD4-222ENST00000568034 FAM236AA0A1B0GUQ0 79 aa9.23□□□□□ -0.93
COMMD4-222ENST00000568034 FAM236BA0A1B0GV22 79 aa9.23□□□□□ -0.93
COMMD4-222ENST00000568034 ANAPC13Q9BS18 74 aa9.23□□□□□ -0.93
COMMD4-222ENST00000568034 A0A087WVE0 104 aa9.22□□□□□ -0.93
COMMD4-222ENST00000568034 HRES1P13985 223 aa9.21□□□□□ -0.94
COMMD4-222ENST00000568034 SPINK7P58062 85 aa9.2□□□□□ -0.94
COMMD4-222ENST00000568034 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
COMMD4-222ENST00000568034 MPLKIPQ8TAP9 179 aa9.18□□□□□ -0.94
COMMD4-222ENST00000568034 ATOX1O00244 68 aa9.16□□□□□ -0.94
COMMD4-222ENST00000568034 TP53AIP1Q9HCN2 124 aa9.14□□□□□ -0.95
COMMD4-222ENST00000568034 FLGP20930 4061 aaPredicted RBP9.13□□□□□ -0.95
COMMD4-222ENST00000568034 MT1HP80294 61 aa9.1□□□□□ -0.95
COMMD4-222ENST00000568034 COX6B2Q6YFQ2 88 aa9.09□□□□□ -0.95
COMMD4-222ENST00000568034 IGKV2D-30A0A075B6S6 120 aa9.08□□□□□ -0.96
COMMD4-222ENST00000568034 IGKV2-30P06310 120 aa9.08□□□□□ -0.96
COMMD4-222ENST00000568034 C7orf65Q6ZTY9 151 aa9.07□□□□□ -0.96
COMMD4-222ENST00000568034 SMIM20Q8N5G0 67 aa9.05□□□□□ -0.96
COMMD4-222ENST00000568034 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
COMMD4-222ENST00000568034 KRTAP9-2Q9BYQ4 174 aa9.03□□□□□ -0.96
COMMD4-222ENST00000568034 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
COMMD4-222ENST00000568034 UQCRQO14949 82 aa9.01□□□□□ -0.97
COMMD4-222ENST00000568034 SERP2Q8N6R1 65 aa9□□□□□ -0.97
COMMD4-222ENST00000568034 OCR1Q9BZK8 76 aa9□□□□□ -0.97
COMMD4-222ENST00000568034 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
COMMD4-222ENST00000568034 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
COMMD4-222ENST00000568034 COX7CP15954 63 aa8.99□□□□□ -0.97
COMMD4-222ENST00000568034 TRAV7A0A075B6U4 112 aa8.95□□□□□ -0.98
COMMD4-222ENST00000568034 H0Y9P7 68 aa8.94□□□□□ -0.98
COMMD4-222ENST00000568034 CCDC179H3BU77 68 aa8.94□□□□□ -0.98
COMMD4-222ENST00000568034 CYP4F30PQ9H0H9 118 aa8.92□□□□□ -0.98
COMMD4-222ENST00000568034 LOC101927531A0A1B0GV80 90 aa8.91□□□□□ -0.98
COMMD4-222ENST00000568034 C4orf26Q17RF5 130 aa8.89□□□□□ -0.99
COMMD4-222ENST00000568034 M0R2T5 61 aa8.86□□□□□ -0.99
COMMD4-222ENST00000568034 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
COMMD4-222ENST00000568034 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
COMMD4-222ENST00000568034 C5orf47Q569G3 176 aa8.83□□□□□ -1
COMMD4-222ENST00000568034 C1orf64Q8NEQ6 169 aa8.83□□□□□ -1
COMMD4-222ENST00000568034 KRTAP3-1Q9BYR8 98 aa8.83□□□□□ -1
COMMD4-222ENST00000568034 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
COMMD4-222ENST00000568034 LINC00208Q96KT6 92 aa8.82□□□□□ -1
COMMD4-222ENST00000568034 MP68P56378 58 aa8.81□□□□□ -1
COMMD4-222ENST00000568034 C20orf197Q8N268 126 aa8.8□□□□□ -1
COMMD4-222ENST00000568034 H3BPC8 53 aa8.76□□□□□ -1.01
COMMD4-222ENST00000568034 KLKP1Q107X0 134 aa8.76□□□□□ -1.01
COMMD4-222ENST00000568034 KRTAP9-6A0A140TA67 174 aa8.74□□□□□ -1.01
COMMD4-222ENST00000568034 NDUFC1O43677 76 aa8.73□□□□□ -1.01
COMMD4-222ENST00000568034 TMEM258P61165 79 aa8.71□□□□□ -1.02
COMMD4-222ENST00000568034 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
COMMD4-222ENST00000568034 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms