RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 KRTAP16-1A8MUX0 517 aa13.1□□□□□ -0.31
FANCA-228ENST00000567943 C14orf132Q9NPU4 83 aa13.1□□□□□ -0.31
FANCA-228ENST00000567943 A0A1W2PPM0 123 aa13.09□□□□□ -0.31
FANCA-228ENST00000567943 PDE6GP18545 87 aa13.08□□□□□ -0.32
FANCA-228ENST00000567943 LCE2DQ5TA82 110 aaPredicted RBP13.08□□□□□ -0.32
FANCA-228ENST00000567943 COX6B2Q6YFQ2 88 aa13.07□□□□□ -0.32
FANCA-228ENST00000567943 A0A1B0GVX0 72 aa13.05□□□□□ -0.32
FANCA-228ENST00000567943 J3KT08 172 aa13.04□□□□□ -0.32
FANCA-228ENST00000567943 A0A1B0GW54 56 aa13.03□□□□□ -0.32
FANCA-228ENST00000567943 LORP23490 312 aaPredicted RBP13.03□□□□□ -0.32
FANCA-228ENST00000567943 MTURNQ8N3F0 131 aa13.02□□□□□ -0.33
FANCA-228ENST00000567943 C8orf87E5RJ46 101 aa13.01□□□□□ -0.33
FANCA-228ENST00000567943 H3BT86 120 aa13.01□□□□□ -0.33
FANCA-228ENST00000567943 KRTAP10-6P60371 365 aaPredicted RBP13.01□□□□□ -0.33
FANCA-228ENST00000567943 KRTAP9-6A0A140TA67 174 aa13□□□□□ -0.33
FANCA-228ENST00000567943 NDUFB1O75438 58 aa12.94□□□□□ -0.34
FANCA-228ENST00000567943 SPCS1Q9Y6A9 102 aa12.93□□□□□ -0.34
FANCA-228ENST00000567943 M0R2T5 61 aa12.92□□□□□ -0.34
FANCA-228ENST00000567943 COL5A1-AS1Q5SY13 56 aa12.9□□□□□ -0.34
FANCA-228ENST00000567943 FSIP2Q5CZC0 6907 aa12.89□□□□□ -0.35
FANCA-228ENST00000567943 A8MWP4 228 aa12.89□□□□□ -0.35
FANCA-228ENST00000567943 NREPQ16612 68 aa12.89□□□□□ -0.35
FANCA-228ENST00000567943 IGKV3D-7A0A0C4DH55 119 aa12.85□□□□□ -0.35
FANCA-228ENST00000567943 C8orf17Q9NRJ1 99 aa12.84□□□□□ -0.35
FANCA-228ENST00000567943 SMCPP49901 116 aaPredicted RBP12.8□□□□□ -0.36
FANCA-228ENST00000567943 PRR15Q8IV56 129 aa12.78□□□□□ -0.36
FANCA-228ENST00000567943 Q8N9P0 234 aaPredicted RBP12.77□□□□□ -0.37
FANCA-228ENST00000567943 ZCCHC13Q8WW36 166 aaKnown RBP12.77□□□□□ -0.37
FANCA-228ENST00000567943 K7EP34 96 aa12.74□□□□□ -0.37
FANCA-228ENST00000567943 PCP4L1A6NKN8 68 aa12.73□□□□□ -0.37
FANCA-228ENST00000567943 Q6ZVQ6 151 aa12.73□□□□□ -0.37
FANCA-228ENST00000567943 CRCT1Q9UGL9 99 aa12.73□□□□□ -0.37
FANCA-228ENST00000567943 PRO0461Q9UI25 63 aa12.72□□□□□ -0.37
FANCA-228ENST00000567943 HRES1P13985 223 aa12.71□□□□□ -0.37
FANCA-228ENST00000567943 K7EQZ3 153 aa12.69□□□□□ -0.38
FANCA-228ENST00000567943 MMP24-AS1A0A0U1RRL7 71 aa12.68□□□□□ -0.38
FANCA-228ENST00000567943 FAM236DA0A1B0GTK5 79 aa12.68□□□□□ -0.38
FANCA-228ENST00000567943 BPY2O14599 106 aa12.68□□□□□ -0.38
FANCA-228ENST00000567943 FAM236CP0DP71 79 aa12.68□□□□□ -0.38
FANCA-228ENST00000567943 MPLKIPQ8TAP9 179 aa12.67□□□□□ -0.38
FANCA-228ENST00000567943 RBM12B-AS1Q9P1G2 102 aa12.66□□□□□ -0.38
FANCA-228ENST00000567943 TMEM254Q8TBM7 123 aa12.64□□□□□ -0.39
FANCA-228ENST00000567943 MRPL34Q9BQ48 92 aaKnown RBP12.63□□□□□ -0.39
FANCA-228ENST00000567943 SPINK7P58062 85 aa12.62□□□□□ -0.39
FANCA-228ENST00000567943 hDV103S1A0JD37 113 aa12.6□□□□□ -0.39
FANCA-228ENST00000567943 GTF2H5Q6ZYL4 71 aa12.6□□□□□ -0.39
FANCA-228ENST00000567943 KRTAP9-8Q9BYQ0 159 aa12.6□□□□□ -0.39
FANCA-228ENST00000567943 Q8N9L7 120 aa12.56□□□□□ -0.4
FANCA-228ENST00000567943 LINC00846Q9NV44 126 aa12.55□□□□□ -0.4
FANCA-228ENST00000567943 NDUFS5O43920 106 aa12.54□□□□□ -0.4
FANCA-228ENST00000567943 UBL5Q9BZL1 73 aa12.51□□□□□ -0.41
FANCA-228ENST00000567943 F8W1H4 67 aa12.49□□□□□ -0.41
FANCA-228ENST00000567943 WFDC13Q8IUB5 93 aa12.49□□□□□ -0.41
FANCA-228ENST00000567943 CASC2Q6XLA1 102 aa12.45□□□□□ -0.42
FANCA-228ENST00000567943 ETDBQ3ZM63 59 aa12.44□□□□□ -0.42
FANCA-228ENST00000567943 MT2AP02795 61 aa12.39□□□□□ -0.43
FANCA-228ENST00000567943 HCG22E2RYF7 251 aa12.38□□□□□ -0.43
FANCA-228ENST00000567943 USH2AO75445 5202 aa12.38□□□□□ -0.43
FANCA-228ENST00000567943 Q5W150 140 aa12.36□□□□□ -0.43
FANCA-228ENST00000567943 IGKV2D-30A0A075B6S6 120 aa12.31□□□□□ -0.44
FANCA-228ENST00000567943 MT1FP04733 61 aa12.31□□□□□ -0.44
FANCA-228ENST00000567943 IGKV2-30P06310 120 aa12.31□□□□□ -0.44
FANCA-228ENST00000567943 CXCL6P80162 114 aa12.27□□□□□ -0.45
FANCA-228ENST00000567943 C7orf65Q6ZTY9 151 aa12.27□□□□□ -0.45
FANCA-228ENST00000567943 SSPOA2VEC9 5147 aa12.26□□□□□ -0.45
FANCA-228ENST00000567943 KRTAP9-3Q9BYQ3 159 aa12.2□□□□□ -0.46
FANCA-228ENST00000567943 KRTAP10-10P60014 251 aa12.17□□□□□ -0.46
FANCA-228ENST00000567943 LCE2BO14633 110 aa12.15□□□□□ -0.46
FANCA-228ENST00000567943 H1FX-AS1Q4G0G2 97 aa12.15□□□□□ -0.46
FANCA-228ENST00000567943 ACYP1P07311 99 aa12.13□□□□□ -0.47
FANCA-228ENST00000567943 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
FANCA-228ENST00000567943 C4orf26Q17RF5 130 aa12.08□□□□□ -0.48
FANCA-228ENST00000567943 TP53AIP1Q9HCN2 124 aa12.08□□□□□ -0.48
FANCA-228ENST00000567943 A0A1B0GV90 55 aa12.02□□□□□ -0.49
FANCA-228ENST00000567943 ATP5EP2Q5VTU8 51 aa11.99□□□□□ -0.49
FANCA-228ENST00000567943 FCGBPQ9Y6R7 5405 aaPredicted RBP11.97□□□□□ -0.49
FANCA-228ENST00000567943 HIST1H4AP62805 103 aaKnown RBP11.94□□□□□ -0.5
FANCA-228ENST00000567943 KRTAP19-1Q8IUB9 90 aa11.91□□□□□ -0.5
FANCA-228ENST00000567943 KRTAP3-1Q9BYR8 98 aa11.89□□□□□ -0.51
FANCA-228ENST00000567943 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.87□□□□□ -0.51
FANCA-228ENST00000567943 C1orf64Q8NEQ6 169 aa11.87□□□□□ -0.51
FANCA-228ENST00000567943 LINC00643Q86TS7 51 aa11.86□□□□□ -0.51
FANCA-228ENST00000567943 TRAV22A0A0B4J277 110 aa11.85□□□□□ -0.51
FANCA-228ENST00000567943 CYP4F30PQ9H0H9 118 aa11.82□□□□□ -0.52
FANCA-228ENST00000567943 A0A087WVE0 104 aa11.8□□□□□ -0.52
FANCA-228ENST00000567943 S4R3F8 94 aa11.78□□□□□ -0.52
FANCA-228ENST00000567943 LOC101927531A0A1B0GV80 90 aa11.77□□□□□ -0.53
FANCA-228ENST00000567943 C5orf47Q569G3 176 aa11.77□□□□□ -0.53
FANCA-228ENST00000567943 UQCRQO14949 82 aa11.76□□□□□ -0.53
FANCA-228ENST00000567943 H0Y9P7 68 aa11.71□□□□□ -0.53
FANCA-228ENST00000567943 KRTAP9-7A8MTY7 169 aa11.7□□□□□ -0.54
FANCA-228ENST00000567943 LCA10Q71F78 164 aa11.69□□□□□ -0.54
FANCA-228ENST00000567943 KRTAP19-6Q3LI70 58 aa11.68□□□□□ -0.54
FANCA-228ENST00000567943 J3QR89 54 aa11.67□□□□□ -0.54
FANCA-228ENST00000567943 ATOX1O00244 68 aa11.67□□□□□ -0.54
FANCA-228ENST00000567943 CSAG1Q6PB30 78 aa11.66□□□□□ -0.54
FANCA-228ENST00000567943 MACF1Q9UPN3 7388 aaKnown RBP11.57□□□□□ -0.56
FANCA-228ENST00000567943 FAM236AA0A1B0GUQ0 79 aa11.57□□□□□ -0.56
FANCA-228ENST00000567943 FAM236BA0A1B0GV22 79 aa11.57□□□□□ -0.56
FANCA-228ENST00000567943 OCR1Q9BZK8 76 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms