RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 NREPQ16612 68 aa9.15□□□□□ -0.94
CLN6-208ENST00000567060 A0A1B0GV90 55 aa9.14□□□□□ -0.95
CLN6-208ENST00000567060 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
CLN6-208ENST00000567060 NDUFB1O75438 58 aa9.1□□□□□ -0.95
CLN6-208ENST00000567060 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
CLN6-208ENST00000567060 C8orf87E5RJ46 101 aa9.08□□□□□ -0.96
CLN6-208ENST00000567060 DEFB116Q30KQ4 102 aa9.08□□□□□ -0.96
CLN6-208ENST00000567060 A0A1B0GVX0 72 aa9.07□□□□□ -0.96
CLN6-208ENST00000567060 A8MWP4 228 aa9.07□□□□□ -0.96
CLN6-208ENST00000567060 LINC00313P59037 77 aa9.07□□□□□ -0.96
CLN6-208ENST00000567060 UBL5Q9BZL1 73 aa9.07□□□□□ -0.96
CLN6-208ENST00000567060 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
CLN6-208ENST00000567060 Q6ZVQ6 151 aa9.05□□□□□ -0.96
CLN6-208ENST00000567060 ACYP1P07311 99 aa9.04□□□□□ -0.96
CLN6-208ENST00000567060 RPL37P61927 97 aaKnown RBP9.03□□□□□ -0.96
CLN6-208ENST00000567060 Q75L30 129 aa9.03□□□□□ -0.96
CLN6-208ENST00000567060 LINC00846Q9NV44 126 aa9.03□□□□□ -0.96
CLN6-208ENST00000567060 IGHV6-1A0A0B4J1U7 121 aa9.02□□□□□ -0.97
CLN6-208ENST00000567060 FAM240AA0A1B0GVK7 77 aa9.02□□□□□ -0.97
CLN6-208ENST00000567060 BPY2O14599 106 aa9.02□□□□□ -0.97
CLN6-208ENST00000567060 CRCT1Q9UGL9 99 aa9.02□□□□□ -0.97
CLN6-208ENST00000567060 C20orf166-AS1Q96NR2 134 aa9.01□□□□□ -0.97
CLN6-208ENST00000567060 DSCR10P59022 87 aa9□□□□□ -0.97
CLN6-208ENST00000567060 PRR15Q8IV56 129 aa9□□□□□ -0.97
CLN6-208ENST00000567060 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
CLN6-208ENST00000567060 A8MUU9 505 aa8.98□□□□□ -0.97
CLN6-208ENST00000567060 KRTAP16-1A8MUX0 517 aa8.95□□□□□ -0.98
CLN6-208ENST00000567060 C8orf17Q9NRJ1 99 aa8.95□□□□□ -0.98
CLN6-208ENST00000567060 ATP11AUNQ6ZP68 121 aa8.94□□□□□ -0.98
CLN6-208ENST00000567060 J3QR89 54 aa8.93□□□□□ -0.98
CLN6-208ENST00000567060 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
CLN6-208ENST00000567060 KRTAP4-1Q9BYQ7 146 aa8.93□□□□□ -0.98
CLN6-208ENST00000567060 CXCL6P80162 114 aa8.92□□□□□ -0.98
CLN6-208ENST00000567060 PCOTHQ58A44 107 aa8.92□□□□□ -0.98
CLN6-208ENST00000567060 K7EQZ3 153 aa8.91□□□□□ -0.98
CLN6-208ENST00000567060 ATP5EP2Q5VTU8 51 aa8.88□□□□□ -0.99
CLN6-208ENST00000567060 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
CLN6-208ENST00000567060 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
CLN6-208ENST00000567060 MMP24-AS1A0A0U1RRL7 71 aa8.87□□□□□ -0.99
CLN6-208ENST00000567060 hDV103S1A0JD37 113 aa8.85□□□□□ -0.99
CLN6-208ENST00000567060 MRPL34Q9BQ48 92 aaKnown RBP8.84□□□□□ -0.99
CLN6-208ENST00000567060 LINC00643Q86TS7 51 aa8.81□□□□□ -1
CLN6-208ENST00000567060 LCE2CQ5TA81 110 aa8.8□□□□□ -1
CLN6-208ENST00000567060 Q8N9L7 120 aa8.8□□□□□ -1
CLN6-208ENST00000567060 HCG22E2RYF7 251 aa8.79□□□□□ -1
CLN6-208ENST00000567060 CASC2Q6XLA1 102 aa8.79□□□□□ -1
CLN6-208ENST00000567060 ZCCHC13Q8WW36 166 aaKnown RBP8.77□□□□□ -1.01
CLN6-208ENST00000567060 K7ERU9 68 aa8.74□□□□□ -1.01
CLN6-208ENST00000567060 WFDC13Q8IUB5 93 aa8.74□□□□□ -1.01
CLN6-208ENST00000567060 KRTAP19-2Q3LHN2 52 aa8.72□□□□□ -1.01
CLN6-208ENST00000567060 NDUFS5O43920 106 aa8.71□□□□□ -1.02
CLN6-208ENST00000567060 MT1HP80294 61 aa8.67□□□□□ -1.02
CLN6-208ENST00000567060 TP53AIP1Q9HCN2 124 aa8.67□□□□□ -1.02
CLN6-208ENST00000567060 HIST1H4AP62805 103 aaKnown RBP8.66□□□□□ -1.02
CLN6-208ENST00000567060 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
CLN6-208ENST00000567060 SPINK7P58062 85 aa8.59□□□□□ -1.03
CLN6-208ENST00000567060 IMUPQ9GZP8 106 aa8.58□□□□□ -1.04
CLN6-208ENST00000567060 KRTAP10-6P60371 365 aaPredicted RBP8.57□□□□□ -1.04
CLN6-208ENST00000567060 FLGP20930 4061 aaPredicted RBP8.56□□□□□ -1.04
CLN6-208ENST00000567060 Q5W150 140 aa8.55□□□□□ -1.04
CLN6-208ENST00000567060 RBM12B-AS1Q9P1G2 102 aa8.55□□□□□ -1.04
CLN6-208ENST00000567060 COX6B2Q6YFQ2 88 aa8.54□□□□□ -1.04
CLN6-208ENST00000567060 A0A087WVE0 104 aa8.53□□□□□ -1.04
CLN6-208ENST00000567060 HRES1P13985 223 aa8.53□□□□□ -1.04
CLN6-208ENST00000567060 C7orf65Q6ZTY9 151 aa8.53□□□□□ -1.04
CLN6-208ENST00000567060 MPLKIPQ8TAP9 179 aa8.52□□□□□ -1.05
CLN6-208ENST00000567060 UQCRQO14949 82 aa8.5□□□□□ -1.05
CLN6-208ENST00000567060 TRAV22A0A0B4J277 110 aa8.47□□□□□ -1.05
CLN6-208ENST00000567060 IGKV2D-30A0A075B6S6 120 aa8.46□□□□□ -1.06
CLN6-208ENST00000567060 IGKV2-30P06310 120 aa8.46□□□□□ -1.06
CLN6-208ENST00000567060 KRTAP9-7A8MTY7 169 aa8.45□□□□□ -1.06
CLN6-208ENST00000567060 FAM236DA0A1B0GTK5 79 aa8.44□□□□□ -1.06
CLN6-208ENST00000567060 ATOX1O00244 68 aa8.44□□□□□ -1.06
CLN6-208ENST00000567060 MT-ATP8P03928 68 aa8.44□□□□□ -1.06
CLN6-208ENST00000567060 FAM236CP0DP71 79 aa8.44□□□□□ -1.06
CLN6-208ENST00000567060 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
CLN6-208ENST00000567060 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
CLN6-208ENST00000567060 SCGB1A1P11684 91 aa8.41□□□□□ -1.06
CLN6-208ENST00000567060 OCR1Q9BZK8 76 aa8.41□□□□□ -1.06
CLN6-208ENST00000567060 M0R2T5 61 aa8.4□□□□□ -1.06
CLN6-208ENST00000567060 SSPOA2VEC9 5147 aa8.4□□□□□ -1.06
CLN6-208ENST00000567060 USH2AO75445 5202 aa8.37□□□□□ -1.07
CLN6-208ENST00000567060 H0Y9P7 68 aa8.36□□□□□ -1.07
CLN6-208ENST00000567060 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
CLN6-208ENST00000567060 SMIM20Q8N5G0 67 aa8.36□□□□□ -1.07
CLN6-208ENST00000567060 MP68P56378 58 aa8.35□□□□□ -1.07
CLN6-208ENST00000567060 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.07
CLN6-208ENST00000567060 H3BPC8 53 aa8.33□□□□□ -1.08
CLN6-208ENST00000567060 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
CLN6-208ENST00000567060 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
CLN6-208ENST00000567060 C1orf64Q8NEQ6 169 aa8.28□□□□□ -1.08
CLN6-208ENST00000567060 H1FX-AS1Q4G0G2 97 aa8.27□□□□□ -1.09
CLN6-208ENST00000567060 C4orf26Q17RF5 130 aa8.26□□□□□ -1.09
CLN6-208ENST00000567060 LINC00208Q96KT6 92 aa8.26□□□□□ -1.09
CLN6-208ENST00000567060 FCGBPQ9Y6R7 5405 aaPredicted RBP8.25□□□□□ -1.09
CLN6-208ENST00000567060 TRAV7A0A075B6U4 112 aa8.25□□□□□ -1.09
CLN6-208ENST00000567060 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
CLN6-208ENST00000567060 A8MUN3 132 aa8.14□□□□□ -1.11
CLN6-208ENST00000567060 KRTAP3-1Q9BYR8 98 aa8.14□□□□□ -1.11
CLN6-208ENST00000567060 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms