RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 C9JAW5 83 aa7.38□□□□□ -1.23
FANCA-220ENST00000566409 MPLKIPQ8TAP9 179 aa7.38□□□□□ -1.23
FANCA-220ENST00000566409 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
FANCA-220ENST00000566409 HRES1P13985 223 aa7.37□□□□□ -1.23
FANCA-220ENST00000566409 Q6ZQT0 140 aa7.37□□□□□ -1.23
FANCA-220ENST00000566409 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
FANCA-220ENST00000566409 M0R143 59 aa7.35□□□□□ -1.23
FANCA-220ENST00000566409 ATXN8Q156A1 80 aa7.34□□□□□ -1.23
FANCA-220ENST00000566409 LOC110117498A0A087WWA1 95 aa7.31□□□□□ -1.24
FANCA-220ENST00000566409 J3KT08 172 aa7.31□□□□□ -1.24
FANCA-220ENST00000566409 JMJD7-PLA2G4BH0Y9G9 81 aa7.3□□□□□ -1.24
FANCA-220ENST00000566409 SMIM6P0DI80 62 aa7.3□□□□□ -1.24
FANCA-220ENST00000566409 FAM236DA0A1B0GTK5 79 aa7.28□□□□□ -1.24
FANCA-220ENST00000566409 FAM236CP0DP71 79 aa7.28□□□□□ -1.24
FANCA-220ENST00000566409 ZCCHC13Q8WW36 166 aaKnown RBP7.28□□□□□ -1.24
FANCA-220ENST00000566409 USH2AO75445 5202 aa7.28□□□□□ -1.24
FANCA-220ENST00000566409 LCE2BO14633 110 aa7.27□□□□□ -1.25
FANCA-220ENST00000566409 Q8N9P0 234 aaPredicted RBP7.27□□□□□ -1.25
FANCA-220ENST00000566409 C14orf132Q9NPU4 83 aa7.27□□□□□ -1.25
FANCA-220ENST00000566409 RBM12B-AS1Q9P1G2 102 aa7.27□□□□□ -1.25
FANCA-220ENST00000566409 A0A1B0GW54 56 aa7.26□□□□□ -1.25
FANCA-220ENST00000566409 MT2AP02795 61 aa7.26□□□□□ -1.25
FANCA-220ENST00000566409 IGKV3D-7A0A0C4DH55 119 aa7.25□□□□□ -1.25
FANCA-220ENST00000566409 A8MWP4 228 aa7.25□□□□□ -1.25
FANCA-220ENST00000566409 PDE6GP18545 87 aa7.25□□□□□ -1.25
FANCA-220ENST00000566409 NDUFB1O75438 58 aa7.24□□□□□ -1.25
FANCA-220ENST00000566409 C8orf17Q9NRJ1 99 aa7.24□□□□□ -1.25
FANCA-220ENST00000566409 SPINK7P58062 85 aa7.23□□□□□ -1.25
FANCA-220ENST00000566409 BATFQ16520 125 aa7.22□□□□□ -1.25
FANCA-220ENST00000566409 MT1FP04733 61 aa7.21□□□□□ -1.26
FANCA-220ENST00000566409 SSPOA2VEC9 5147 aa7.21□□□□□ -1.26
FANCA-220ENST00000566409 TSTD3H0UI37 97 aa7.2□□□□□ -1.26
FANCA-220ENST00000566409 LYRM7Q5U5X0 104 aa7.19□□□□□ -1.26
FANCA-220ENST00000566409 PRR15Q8IV56 129 aa7.19□□□□□ -1.26
FANCA-220ENST00000566409 Q6ZVQ6 151 aa7.18□□□□□ -1.26
FANCA-220ENST00000566409 LOC105371267A0A1B0GV96 52 aa7.17□□□□□ -1.26
FANCA-220ENST00000566409 C9orf118A6NHY6 69 aa7.17□□□□□ -1.26
FANCA-220ENST00000566409 TAX1BP3O14907 124 aa7.17□□□□□ -1.26
FANCA-220ENST00000566409 NREPQ16612 68 aa7.17□□□□□ -1.26
FANCA-220ENST00000566409 MTURNQ8N3F0 131 aa7.16□□□□□ -1.26
FANCA-220ENST00000566409 MMP24-AS1A0A0U1RRL7 71 aa7.15□□□□□ -1.26
FANCA-220ENST00000566409 H3BS24 57 aa7.15□□□□□ -1.26
FANCA-220ENST00000566409 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
FANCA-220ENST00000566409 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
FANCA-220ENST00000566409 H3BT86 120 aa7.13□□□□□ -1.27
FANCA-220ENST00000566409 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
FANCA-220ENST00000566409 WFDC13Q8IUB5 93 aa7.12□□□□□ -1.27
FANCA-220ENST00000566409 K7EQZ3 153 aa7.11□□□□□ -1.27
FANCA-220ENST00000566409 TMEM254Q8TBM7 123 aa7.11□□□□□ -1.27
FANCA-220ENST00000566409 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
FANCA-220ENST00000566409 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
FANCA-220ENST00000566409 FCGBPQ9Y6R7 5405 aaPredicted RBP7.05□□□□□ -1.28
FANCA-220ENST00000566409 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
FANCA-220ENST00000566409 BPY2O14599 106 aa7.04□□□□□ -1.28
FANCA-220ENST00000566409 Q5W150 140 aa7.03□□□□□ -1.28
FANCA-220ENST00000566409 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
FANCA-220ENST00000566409 NDUFS5O43920 106 aa7.02□□□□□ -1.29
FANCA-220ENST00000566409 Q8N9L7 120 aa7.02□□□□□ -1.29
FANCA-220ENST00000566409 SPCS1Q9Y6A9 102 aa7.02□□□□□ -1.29
FANCA-220ENST00000566409 KRTAP19-1Q8IUB9 90 aa7.01□□□□□ -1.29
FANCA-220ENST00000566409 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
FANCA-220ENST00000566409 H1FX-AS1Q4G0G2 97 aa6.97□□□□□ -1.29
FANCA-220ENST00000566409 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.3
FANCA-220ENST00000566409 IGKV2-30P06310 120 aa6.96□□□□□ -1.3
FANCA-220ENST00000566409 CASC2Q6XLA1 102 aa6.95□□□□□ -1.3
FANCA-220ENST00000566409 LINC00846Q9NV44 126 aa6.94□□□□□ -1.3
FANCA-220ENST00000566409 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
FANCA-220ENST00000566409 HCG22E2RYF7 251 aa6.93□□□□□ -1.3
FANCA-220ENST00000566409 COL5A1-AS1Q5SY13 56 aa6.92□□□□□ -1.3
FANCA-220ENST00000566409 C7orf65Q6ZTY9 151 aa6.92□□□□□ -1.3
FANCA-220ENST00000566409 K7EP34 96 aa6.9□□□□□ -1.3
FANCA-220ENST00000566409 CXCL6P80162 114 aa6.87□□□□□ -1.31
FANCA-220ENST00000566409 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
FANCA-220ENST00000566409 UBL5Q9BZL1 73 aa6.87□□□□□ -1.31
FANCA-220ENST00000566409 KRTAP19-6Q3LI70 58 aa6.86□□□□□ -1.31
FANCA-220ENST00000566409 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
FANCA-220ENST00000566409 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
FANCA-220ENST00000566409 F8W1H4 67 aa6.76□□□□□ -1.33
FANCA-220ENST00000566409 ETDBQ3ZM63 59 aa6.76□□□□□ -1.33
FANCA-220ENST00000566409 GTF2H5Q6ZYL4 71 aa6.76□□□□□ -1.33
FANCA-220ENST00000566409 C5orf47Q569G3 176 aa6.74□□□□□ -1.33
FANCA-220ENST00000566409 SYNE2Q8WXH0 6885 aaKnown RBP6.73□□□□□ -1.33
FANCA-220ENST00000566409 PCP4L1A6NKN8 68 aa6.72□□□□□ -1.33
FANCA-220ENST00000566409 C1orf64Q8NEQ6 169 aa6.72□□□□□ -1.33
FANCA-220ENST00000566409 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
FANCA-220ENST00000566409 LCA10Q71F78 164 aa6.69□□□□□ -1.34
FANCA-220ENST00000566409 S4R3F8 94 aa6.69□□□□□ -1.34
FANCA-220ENST00000566409 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
FANCA-220ENST00000566409 CYP4F30PQ9H0H9 118 aa6.64□□□□□ -1.35
FANCA-220ENST00000566409 FAM236AA0A1B0GUQ0 79 aa6.63□□□□□ -1.35
FANCA-220ENST00000566409 FAM236BA0A1B0GV22 79 aa6.63□□□□□ -1.35
FANCA-220ENST00000566409 MT1BP07438 61 aa6.61□□□□□ -1.35
FANCA-220ENST00000566409 A0A087WVE0 104 aa6.6□□□□□ -1.35
FANCA-220ENST00000566409 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
FANCA-220ENST00000566409 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
FANCA-220ENST00000566409 ACYP1P07311 99 aa6.57□□□□□ -1.36
FANCA-220ENST00000566409 KRTAP19-8Q3LI54 63 aa6.57□□□□□ -1.36
FANCA-220ENST00000566409 FAM240AA0A1B0GVK7 77 aa6.55□□□□□ -1.36
FANCA-220ENST00000566409 LOC101927531A0A1B0GV80 90 aa6.54□□□□□ -1.36
FANCA-220ENST00000566409 KRTAP6-3Q3LI67 103 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms