RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SS18L2Q9UHA2 77 aa8.56□□□□□ -1.04
RNF40-205ENST00000563909 A0A087WSZ3 146 aa8.54□□□□□ -1.04
RNF40-205ENST00000563909 PDE6GP18545 87 aa8.54□□□□□ -1.04
RNF40-205ENST00000563909 C1orf195Q5TG92 126 aa8.54□□□□□ -1.04
RNF40-205ENST00000563909 KRTAP19-1Q8IUB9 90 aa8.53□□□□□ -1.04
RNF40-205ENST00000563909 OBSCN-AS1Q96MR7 158 aa8.53□□□□□ -1.04
RNF40-205ENST00000563909 LOC110117498A0A087WWA1 95 aa8.52□□□□□ -1.05
RNF40-205ENST00000563909 VPS25Q9BRG1 176 aa8.52□□□□□ -1.05
RNF40-205ENST00000563909 C21orf62-AS1Q17RA5 79 aa8.51□□□□□ -1.05
RNF40-205ENST00000563909 Q6ZQT0 140 aa8.5□□□□□ -1.05
RNF40-205ENST00000563909 C14orf132Q9NPU4 83 aa8.5□□□□□ -1.05
RNF40-205ENST00000563909 C9orf92A6NGG3 77 aa8.49□□□□□ -1.05
RNF40-205ENST00000563909 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
RNF40-205ENST00000563909 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
RNF40-205ENST00000563909 A0A1B0GW54 56 aa8.47□□□□□ -1.05
RNF40-205ENST00000563909 F8W1H4 67 aa8.46□□□□□ -1.06
RNF40-205ENST00000563909 Q96NJ1 140 aa8.42□□□□□ -1.06
RNF40-205ENST00000563909 KRTAP9-8Q9BYQ0 159 aa8.42□□□□□ -1.06
RNF40-205ENST00000563909 LINC00472Q9H8W2 130 aa8.39□□□□□ -1.07
RNF40-205ENST00000563909 IGKV4-1P06312 121 aa8.37□□□□□ -1.07
RNF40-205ENST00000563909 A0A1B0GV90 55 aa8.36□□□□□ -1.07
RNF40-205ENST00000563909 SIGMAR1Q99720 223 aa8.36□□□□□ -1.07
RNF40-205ENST00000563909 J3KT08 172 aa8.34□□□□□ -1.07
RNF40-205ENST00000563909 NREPQ16612 68 aa8.34□□□□□ -1.07
RNF40-205ENST00000563909 DEFB116Q30KQ4 102 aa8.34□□□□□ -1.07
RNF40-205ENST00000563909 ETDBQ3ZM63 59 aa8.34□□□□□ -1.07
RNF40-205ENST00000563909 LCE2BO14633 110 aa8.32□□□□□ -1.08
RNF40-205ENST00000563909 RPL37P61927 97 aaKnown RBP8.31□□□□□ -1.08
RNF40-205ENST00000563909 KRTAP6-3Q3LI67 103 aa8.28□□□□□ -1.08
RNF40-205ENST00000563909 NDUFB1O75438 58 aa8.26□□□□□ -1.09
RNF40-205ENST00000563909 LINC00313P59037 77 aa8.26□□□□□ -1.09
RNF40-205ENST00000563909 A0A1B0GVX0 72 aa8.25□□□□□ -1.09
RNF40-205ENST00000563909 IGHV6-1A0A0B4J1U7 121 aa8.24□□□□□ -1.09
RNF40-205ENST00000563909 DSCR10P59022 87 aa8.24□□□□□ -1.09
RNF40-205ENST00000563909 Q6ZVQ6 151 aa8.24□□□□□ -1.09
RNF40-205ENST00000563909 LINC00846Q9NV44 126 aa8.24□□□□□ -1.09
RNF40-205ENST00000563909 NEBP20929 6669 aa8.23□□□□□ -1.09
RNF40-205ENST00000563909 A8MWP4 228 aa8.23□□□□□ -1.09
RNF40-205ENST00000563909 C8orf87E5RJ46 101 aa8.23□□□□□ -1.09
RNF40-205ENST00000563909 UBL5Q9BZL1 73 aa8.23□□□□□ -1.09
RNF40-205ENST00000563909 MT2AP02795 61 aa8.22□□□□□ -1.09
RNF40-205ENST00000563909 BPY2O14599 106 aa8.21□□□□□ -1.1
RNF40-205ENST00000563909 Q75L30 129 aa8.19□□□□□ -1.1
RNF40-205ENST00000563909 IGKV3D-7A0A0C4DH55 119 aa8.18□□□□□ -1.1
RNF40-205ENST00000563909 NOTCH2NLQ7Z3S9 236 aa8.18□□□□□ -1.1
RNF40-205ENST00000563909 PRR15Q8IV56 129 aa8.18□□□□□ -1.1
RNF40-205ENST00000563909 ACYP1P07311 99 aa8.17□□□□□ -1.1
RNF40-205ENST00000563909 C20orf166-AS1Q96NR2 134 aa8.17□□□□□ -1.1
RNF40-205ENST00000563909 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
RNF40-205ENST00000563909 A8MUU9 505 aa8.16□□□□□ -1.1
RNF40-205ENST00000563909 KRTAP16-1A8MUX0 517 aa8.15□□□□□ -1.1
RNF40-205ENST00000563909 MT1FP04733 61 aa8.15□□□□□ -1.1
RNF40-205ENST00000563909 C8orf17Q9NRJ1 99 aa8.15□□□□□ -1.1
RNF40-205ENST00000563909 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
RNF40-205ENST00000563909 ATP11AUNQ6ZP68 121 aa8.14□□□□□ -1.11
RNF40-205ENST00000563909 FAM240AA0A1B0GVK7 77 aa8.13□□□□□ -1.11
RNF40-205ENST00000563909 K7EQZ3 153 aa8.13□□□□□ -1.11
RNF40-205ENST00000563909 KRTAP10-10P60014 251 aa8.11□□□□□ -1.11
RNF40-205ENST00000563909 MMP24-AS1A0A0U1RRL7 71 aa8.07□□□□□ -1.12
RNF40-205ENST00000563909 J3QR89 54 aa8.07□□□□□ -1.12
RNF40-205ENST00000563909 CXCL6P80162 114 aa8.07□□□□□ -1.12
RNF40-205ENST00000563909 KRTAP20-1Q3LI63 56 aa8.06□□□□□ -1.12
RNF40-205ENST00000563909 Q8N9L7 120 aa8.06□□□□□ -1.12
RNF40-205ENST00000563909 hDV103S1A0JD37 113 aa8.05□□□□□ -1.12
RNF40-205ENST00000563909 Q8N9P0 234 aaPredicted RBP8.05□□□□□ -1.12
RNF40-205ENST00000563909 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
RNF40-205ENST00000563909 MRPL34Q9BQ48 92 aaKnown RBP8.04□□□□□ -1.12
RNF40-205ENST00000563909 MUC12Q9UKN1 5478 aa8.03□□□□□ -1.12
RNF40-205ENST00000563909 ATP5EP2Q5VTU8 51 aa8.01□□□□□ -1.13
RNF40-205ENST00000563909 CASC2Q6XLA1 102 aa8□□□□□ -1.13
RNF40-205ENST00000563909 WFDC13Q8IUB5 93 aa7.99□□□□□ -1.13
RNF40-205ENST00000563909 HCG22E2RYF7 251 aa7.98□□□□□ -1.13
RNF40-205ENST00000563909 LINC00643Q86TS7 51 aa7.98□□□□□ -1.13
RNF40-205ENST00000563909 ZCCHC13Q8WW36 166 aaKnown RBP7.97□□□□□ -1.13
RNF40-205ENST00000563909 NDUFS5O43920 106 aa7.96□□□□□ -1.14
RNF40-205ENST00000563909 K7ERU9 68 aa7.91□□□□□ -1.14
RNF40-205ENST00000563909 HIST1H4AP62805 103 aaKnown RBP7.9□□□□□ -1.14
RNF40-205ENST00000563909 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
RNF40-205ENST00000563909 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
RNF40-205ENST00000563909 TP53AIP1Q9HCN2 124 aa7.84□□□□□ -1.15
RNF40-205ENST00000563909 SPINK7P58062 85 aa7.83□□□□□ -1.16
RNF40-205ENST00000563909 Q5W150 140 aa7.81□□□□□ -1.16
RNF40-205ENST00000563909 A0A087WVE0 104 aa7.8□□□□□ -1.16
RNF40-205ENST00000563909 HRES1P13985 223 aa7.78□□□□□ -1.16
RNF40-205ENST00000563909 RBM12B-AS1Q9P1G2 102 aa7.77□□□□□ -1.17
RNF40-205ENST00000563909 MDN1Q9NU22 5596 aa7.76□□□□□ -1.17
RNF40-205ENST00000563909 C7orf65Q6ZTY9 151 aa7.74□□□□□ -1.17
RNF40-205ENST00000563909 IGKV2D-30A0A075B6S6 120 aa7.73□□□□□ -1.17
RNF40-205ENST00000563909 IGKV2-30P06310 120 aa7.73□□□□□ -1.17
RNF40-205ENST00000563909 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
RNF40-205ENST00000563909 IMUPQ9GZP8 106 aa7.73□□□□□ -1.17
RNF40-205ENST00000563909 UQCRQO14949 82 aa7.71□□□□□ -1.18
RNF40-205ENST00000563909 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
RNF40-205ENST00000563909 TRAV22A0A0B4J277 110 aa7.68□□□□□ -1.18
RNF40-205ENST00000563909 KMT2DO14686 5537 aa7.66□□□□□ -1.18
RNF40-205ENST00000563909 SCGB1A1P11684 91 aa7.65□□□□□ -1.18
RNF40-205ENST00000563909 ATOX1O00244 68 aa7.63□□□□□ -1.19
RNF40-205ENST00000563909 KRTAP2-3P0C7H8 128 aa7.63□□□□□ -1.19
RNF40-205ENST00000563909 KRTAP2-4Q9BYR9 128 aa7.63□□□□□ -1.19
RNF40-205ENST00000563909 H0Y9P7 68 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms