RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 PIGYQ3MUY2 71 aa0.38□□□□□ -2.35
LINC00557-201ENST00000563184 C10orf113Q5VZT2 155 aa0.38□□□□□ -2.35
LINC00557-201ENST00000563184 SFTA2Q6UW10 78 aa0.38□□□□□ -2.35
LINC00557-201ENST00000563184 LRP1BQ9NZR2 4599 aa0.38□□□□□ -2.35
LINC00557-201ENST00000563184 MYCBP2O75592 4640 aa0.38□□□□□ -2.35
LINC00557-201ENST00000563184 RNF213Q63HN8 5207 aa0.38□□□□□ -2.35
LINC00557-201ENST00000563184 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 FAT3Q8TDW7 4589 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 TRBV7-4A0A0J9YYF1 115 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 ARMS2P0C7Q2 107 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 SNRPFP62306 86 aaKnown RBP0.37□□□□□ -2.35
LINC00557-201ENST00000563184 DEFB133Q30KQ1 61 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 WFDC9Q8NEX5 89 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 FDCSPQ8NFU4 85 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 LCN9Q8WX39 176 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 TP53AIP1Q9HCN2 124 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 DNAH2Q9P225 4427 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 FAT1Q14517 4588 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 ALMS1Q8TCU4 4167 aa0.37□□□□□ -2.35
LINC00557-201ENST00000563184 HSPG2P98160 4391 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 STARD9Q9P2P6 4700 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 KIF20BQ96Q89 1820 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 LRP2P98164 4655 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 KMT2AQ03164 3969 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 DNAJC13O75165 2243 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 USF3Q68DE3 2245 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 SSPOA2VEC9 5147 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 STATHP02808 62 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 PEA15Q15121 130 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 ETDBQ3ZM63 59 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 Q8IZM0 81 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 CSMD3Q7Z407 3707 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 VPS13DQ5THJ4 4388 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 VPS13BQ7Z7G8 4022 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 TCHHQ07283 1943 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 DNAH6Q9C0G6 4158 aa0.36□□□□□ -2.35
LINC00557-201ENST00000563184 WNK2Q9Y3S1 2297 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 HRNRQ86YZ3 2850 aaPredicted RBP0.35□□□□□ -2.35
LINC00557-201ENST00000563184 DEFB108AA8MXU0 73 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 D6R8Y8 96 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 LEPROTL1O95214 131 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 SPINK1P00995 79 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 ACYP1P07311 99 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 Q5BKY6 102 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 MUSTN1Q8IVN3 82 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 S100A16Q96FQ6 103 aaKnown RBP0.35□□□□□ -2.35
LINC00557-201ENST00000563184 COX14Q96I36 57 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 USMG5Q96IX5 58 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 LINC01600Q96MT4 127 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 PRO0255Q9UI72 69 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 MYO7BQ6PIF6 2116 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 PKHD1L1Q86WI1 4243 aa0.35□□□□□ -2.35
LINC00557-201ENST00000563184 PKD1P98161 4303 aa0.34□□□□□ -2.35
LINC00557-201ENST00000563184 H0Y9P7 68 aa0.34□□□□□ -2.36
LINC00557-201ENST00000563184 K7EP34 96 aa0.34□□□□□ -2.36
LINC00557-201ENST00000563184 CYB5AP00167 134 aa0.34□□□□□ -2.36
LINC00557-201ENST00000563184 HMGN2P05204 90 aaKnown RBP0.34□□□□□ -2.36
LINC00557-201ENST00000563184 GNGT1P63211 74 aa0.34□□□□□ -2.36
LINC00557-201ENST00000563184 DEFB121Q5J5C9 76 aa0.34□□□□□ -2.36
LINC00557-201ENST00000563184 C9orf62Q8N4C0 152 aa0.34□□□□□ -2.36
LINC00557-201ENST00000563184 C20orf78Q9BR46 151 aa0.34□□□□□ -2.36
LINC00557-201ENST00000563184 PSENENQ9NZ42 101 aa0.34□□□□□ -2.36
LINC00557-201ENST00000563184 DNAH8Q96JB1 4490 aa0.33□□□□□ -2.36
LINC00557-201ENST00000563184 A0A1B0GU69 56 aa0.33□□□□□ -2.36
LINC00557-201ENST00000563184 KANTRA0A1W2PQU2 76 aa0.33□□□□□ -2.36
LINC00557-201ENST00000563184 F8WEM9 126 aa0.33□□□□□ -2.36
LINC00557-201ENST00000563184 I3L2K1 104 aa0.33□□□□□ -2.36
LINC00557-201ENST00000563184 COX8AP10176 69 aa0.33□□□□□ -2.36
LINC00557-201ENST00000563184 LINC00643Q86TS7 51 aa0.33□□□□□ -2.36
LINC00557-201ENST00000563184 HIGD1BQ9P298 99 aa0.33□□□□□ -2.36
LINC00557-201ENST00000563184 LRP1Q07954 4544 aaKnown RBP0.33□□□□□ -2.36
LINC00557-201ENST00000563184 SYNE1Q8NF91 8797 aaKnown RBP0.33□□□□□ -2.36
LINC00557-201ENST00000563184 A0A087WVE0 104 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 IGLC3P0DOY3 106 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 WFDC2Q14508 124 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 PLGLAQ15195 96 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 Q5VSD8 79 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 C6orf201Q7Z4U5 140 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 DEFB108BQ8NET1 73 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 DEFB104AQ8WTQ1 72 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 S100A13Q99584 98 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 CRIPTQ9P021 101 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 TNXBP22105 4242 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 MUC17Q685J3 4493 aa0.32□□□□□ -2.36
LINC00557-201ENST00000563184 USH2AO75445 5202 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 PDCD11Q14690 1871 aaKnown RBP0.31□□□□□ -2.36
LINC00557-201ENST00000563184 LINC00959A0A1B0GUT2 108 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 H0YGG7 62 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 SPINK4O60575 86 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 CFDP00746 253 aaPredicted RBP0.31□□□□□ -2.36
LINC00557-201ENST00000563184 IFI6P09912 130 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 NMSQ5H8A3 153 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 DEFB107AQ8IZN7 70 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 DEFB106AQ8N104 65 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 KAAG1Q9UBP8 84 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 UBE2D4Q9Y2X8 147 aa0.31□□□□□ -2.36
LINC00557-201ENST00000563184 KMT2DO14686 5537 aa0.3□□□□□ -2.36
LINC00557-201ENST00000563184 MYMXA0A1B0GTQ4 84 aa0.3□□□□□ -2.36
LINC00557-201ENST00000563184 A0A1B0GUT8 65 aa0.3□□□□□ -2.36
LINC00557-201ENST00000563184 M0R1W7 72 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms