RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 RETNLBQ9BQ08 111 aa12.76□□□□□ -0.37
SYNGR3-202ENST00000562045 LRP2P98164 4655 aa12.72□□□□□ -0.37
SYNGR3-202ENST00000562045 IGKV4-1P06312 121 aa12.72□□□□□ -0.37
SYNGR3-202ENST00000562045 C1orf195Q5TG92 126 aa12.71□□□□□ -0.38
SYNGR3-202ENST00000562045 DSCR10P59022 87 aa12.7□□□□□ -0.38
SYNGR3-202ENST00000562045 CCDC179H3BU77 68 aa12.69□□□□□ -0.38
SYNGR3-202ENST00000562045 PRR4Q16378 134 aa12.69□□□□□ -0.38
SYNGR3-202ENST00000562045 A8MWP4 228 aa12.66□□□□□ -0.38
SYNGR3-202ENST00000562045 HIST1H4AP62805 103 aaKnown RBP12.65□□□□□ -0.38
SYNGR3-202ENST00000562045 UBR4Q5T4S7 5183 aa12.65□□□□□ -0.38
SYNGR3-202ENST00000562045 K7EQZ3 153 aa12.64□□□□□ -0.39
SYNGR3-202ENST00000562045 NDUFB1O75438 58 aa12.64□□□□□ -0.39
SYNGR3-202ENST00000562045 Q8N9L7 120 aa12.64□□□□□ -0.39
SYNGR3-202ENST00000562045 PRR15Q8IV56 129 aa12.6□□□□□ -0.39
SYNGR3-202ENST00000562045 A0A087WVE0 104 aa12.56□□□□□ -0.4
SYNGR3-202ENST00000562045 A0A1B0GVX0 72 aa12.56□□□□□ -0.4
SYNGR3-202ENST00000562045 FAM236AA0A1B0GUQ0 79 aa12.54□□□□□ -0.4
SYNGR3-202ENST00000562045 FAM236BA0A1B0GV22 79 aa12.54□□□□□ -0.4
SYNGR3-202ENST00000562045 IGHV6-1A0A0B4J1U7 121 aa12.53□□□□□ -0.4
SYNGR3-202ENST00000562045 IGLV7-46A0A075B6I9 117 aa12.51□□□□□ -0.41
SYNGR3-202ENST00000562045 UQCRQO14949 82 aa12.48□□□□□ -0.41
SYNGR3-202ENST00000562045 HCG22E2RYF7 251 aa12.47□□□□□ -0.41
SYNGR3-202ENST00000562045 FP248Q71RG6 208 aaPredicted RBP12.47□□□□□ -0.41
SYNGR3-202ENST00000562045 C8orf17Q9NRJ1 99 aa12.46□□□□□ -0.41
SYNGR3-202ENST00000562045 C8orf87E5RJ46 101 aa12.45□□□□□ -0.42
SYNGR3-202ENST00000562045 MMP24-AS1A0A0U1RRL7 71 aa12.44□□□□□ -0.42
SYNGR3-202ENST00000562045 ATOX1O00244 68 aa12.42□□□□□ -0.42
SYNGR3-202ENST00000562045 LINC00313P59037 77 aa12.42□□□□□ -0.42
SYNGR3-202ENST00000562045 COX7CP15954 63 aa12.41□□□□□ -0.42
SYNGR3-202ENST00000562045 TPRXLQ17RH7 258 aa12.41□□□□□ -0.42
SYNGR3-202ENST00000562045 CASC2Q6XLA1 102 aa12.41□□□□□ -0.42
SYNGR3-202ENST00000562045 WFDC13Q8IUB5 93 aa12.41□□□□□ -0.42
SYNGR3-202ENST00000562045 SMIM20Q8N5G0 67 aa12.41□□□□□ -0.42
SYNGR3-202ENST00000562045 NOTCH2NLQ7Z3S9 236 aa12.4□□□□□ -0.42
SYNGR3-202ENST00000562045 hDV103S1A0JD37 113 aa12.4□□□□□ -0.43
SYNGR3-202ENST00000562045 KRTAP13-3Q3SY46 172 aa12.39□□□□□ -0.43
SYNGR3-202ENST00000562045 RNF213Q63HN8 5207 aa12.36□□□□□ -0.43
SYNGR3-202ENST00000562045 TMEM254Q8TBM7 123 aa12.34□□□□□ -0.43
SYNGR3-202ENST00000562045 MRPL34Q9BQ48 92 aaKnown RBP12.31□□□□□ -0.44
SYNGR3-202ENST00000562045 C9orf92A6NGG3 77 aa12.29□□□□□ -0.44
SYNGR3-202ENST00000562045 KRTAP16-1A8MUX0 517 aa12.27□□□□□ -0.45
SYNGR3-202ENST00000562045 RPS28P62857 69 aaKnown RBP12.27□□□□□ -0.45
SYNGR3-202ENST00000562045 SERP2Q8N6R1 65 aa12.27□□□□□ -0.45
SYNGR3-202ENST00000562045 MUC17Q685J3 4493 aa12.24□□□□□ -0.45
SYNGR3-202ENST00000562045 NDUFS5O43920 106 aa12.21□□□□□ -0.45
SYNGR3-202ENST00000562045 TMEM258P61165 79 aa12.21□□□□□ -0.45
SYNGR3-202ENST00000562045 Q8N9P0 234 aaPredicted RBP12.21□□□□□ -0.45
SYNGR3-202ENST00000562045 MUC2Q02817 5179 aa12.2□□□□□ -0.46
SYNGR3-202ENST00000562045 XP32Q5T750 250 aa12.2□□□□□ -0.46
SYNGR3-202ENST00000562045 OCR1Q9BZK8 76 aa12.19□□□□□ -0.46
SYNGR3-202ENST00000562045 TP53AIP1Q9HCN2 124 aa12.17□□□□□ -0.46
SYNGR3-202ENST00000562045 TRAV7A0A075B6U4 112 aa12.14□□□□□ -0.47
SYNGR3-202ENST00000562045 C20orf166-AS1Q96NR2 134 aa12.14□□□□□ -0.47
SYNGR3-202ENST00000562045 A8MUU9 505 aa12.11□□□□□ -0.47
SYNGR3-202ENST00000562045 CYSTM1Q9H1C7 97 aa12.09□□□□□ -0.47
SYNGR3-202ENST00000562045 Q75L30 129 aa12.08□□□□□ -0.47
SYNGR3-202ENST00000562045 TRAV22A0A0B4J277 110 aa12.02□□□□□ -0.49
SYNGR3-202ENST00000562045 C5orf47Q569G3 176 aa12.02□□□□□ -0.49
SYNGR3-202ENST00000562045 RPL37P61927 97 aaKnown RBP12□□□□□ -0.49
SYNGR3-202ENST00000562045 ZCCHC13Q8WW36 166 aaKnown RBP11.98□□□□□ -0.49
SYNGR3-202ENST00000562045 KRTAP4-1Q9BYQ7 146 aa11.98□□□□□ -0.49
SYNGR3-202ENST00000562045 H0Y9P7 68 aa11.97□□□□□ -0.49
SYNGR3-202ENST00000562045 MP68P56378 58 aa11.97□□□□□ -0.49
SYNGR3-202ENST00000562045 Q5W150 140 aa11.97□□□□□ -0.49
SYNGR3-202ENST00000562045 SEC61BP60468 96 aaKnown RBP11.97□□□□□ -0.49
SYNGR3-202ENST00000562045 PCOTHQ58A44 107 aa11.94□□□□□ -0.5
SYNGR3-202ENST00000562045 ATP11AUNQ6ZP68 121 aa11.94□□□□□ -0.5
SYNGR3-202ENST00000562045 KLKP1Q107X0 134 aa11.91□□□□□ -0.5
SYNGR3-202ENST00000562045 H3BPC8 53 aa11.9□□□□□ -0.5
SYNGR3-202ENST00000562045 C20orf197Q8N268 126 aa11.89□□□□□ -0.51
SYNGR3-202ENST00000562045 LINC00208Q96KT6 92 aa11.88□□□□□ -0.51
SYNGR3-202ENST00000562045 FAM236DA0A1B0GTK5 79 aa11.87□□□□□ -0.51
SYNGR3-202ENST00000562045 FAM236CP0DP71 79 aa11.87□□□□□ -0.51
SYNGR3-202ENST00000562045 H7BZZ5 65 aa11.86□□□□□ -0.51
SYNGR3-202ENST00000562045 A0A0U1RQV1 116 aa11.85□□□□□ -0.51
SYNGR3-202ENST00000562045 C1orf64Q8NEQ6 169 aa11.85□□□□□ -0.51
SYNGR3-202ENST00000562045 LOC101927531A0A1B0GV80 90 aa11.83□□□□□ -0.52
SYNGR3-202ENST00000562045 SERP1Q9Y6X1 66 aa11.83□□□□□ -0.52
SYNGR3-202ENST00000562045 SNURFQ9Y675 71 aa11.82□□□□□ -0.52
SYNGR3-202ENST00000562045 NDUFC1O43677 76 aa11.81□□□□□ -0.52
SYNGR3-202ENST00000562045 IGKV2-30P06310 120 aa11.78□□□□□ -0.52
SYNGR3-202ENST00000562045 FAT4Q6V0I7 4981 aa11.78□□□□□ -0.52
SYNGR3-202ENST00000562045 ATP5EP56381 51 aaPredicted RBP11.77□□□□□ -0.52
SYNGR3-202ENST00000562045 IGKV2D-30A0A075B6S6 120 aa11.76□□□□□ -0.53
SYNGR3-202ENST00000562045 C7orf65Q6ZTY9 151 aa11.74□□□□□ -0.53
SYNGR3-202ENST00000562045 CYP4F30PQ9H0H9 118 aa11.74□□□□□ -0.53
SYNGR3-202ENST00000562045 SPINK7P58062 85 aa11.69□□□□□ -0.54
SYNGR3-202ENST00000562045 C4orf26Q17RF5 130 aa11.69□□□□□ -0.54
SYNGR3-202ENST00000562045 SMIM26A0A096LP01 95 aa11.65□□□□□ -0.54
SYNGR3-202ENST00000562045 KRTAP19-2Q3LHN2 52 aa11.6□□□□□ -0.55
SYNGR3-202ENST00000562045 LCE2CQ5TA81 110 aa11.55□□□□□ -0.56
SYNGR3-202ENST00000562045 HRES1P13985 223 aa11.54□□□□□ -0.56
SYNGR3-202ENST00000562045 LCE2AQ5TA79 106 aaPredicted RBP11.52□□□□□ -0.57
SYNGR3-202ENST00000562045 SPANXA2-OT1Q8N9U9 137 aa11.49□□□□□ -0.57
SYNGR3-202ENST00000562045 PRO0628Q9UI54 55 aa11.47□□□□□ -0.57
SYNGR3-202ENST00000562045 MPLKIPQ8TAP9 179 aa11.38□□□□□ -0.59
SYNGR3-202ENST00000562045 COX6B2Q6YFQ2 88 aa11.37□□□□□ -0.59
SYNGR3-202ENST00000562045 RBM12B-AS1Q9P1G2 102 aa11.36□□□□□ -0.59
SYNGR3-202ENST00000562045 FLGP20930 4061 aaPredicted RBP11.36□□□□□ -0.59
SYNGR3-202ENST00000562045 MT1HP80294 61 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms