RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 DSCR8Q96T75 97 aa6.8□□□□□ -1.32
USB1-205ENST00000561743 A0A1B0GVX0 72 aa6.79□□□□□ -1.32
USB1-205ENST00000561743 BAALC-AS2P0C853 105 aa6.78□□□□□ -1.32
USB1-205ENST00000561743 HRES1P13985 223 aa6.78□□□□□ -1.32
USB1-205ENST00000561743 MPLKIPQ8TAP9 179 aa6.78□□□□□ -1.32
USB1-205ENST00000561743 C8orf87E5RJ46 101 aa6.77□□□□□ -1.33
USB1-205ENST00000561743 FAM236DA0A1B0GTK5 79 aa6.76□□□□□ -1.33
USB1-205ENST00000561743 C9JAW5 83 aa6.76□□□□□ -1.33
USB1-205ENST00000561743 FAM236CP0DP71 79 aa6.76□□□□□ -1.33
USB1-205ENST00000561743 BATFQ16520 125 aa6.76□□□□□ -1.33
USB1-205ENST00000561743 J3KT08 172 aa6.74□□□□□ -1.33
USB1-205ENST00000561743 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
USB1-205ENST00000561743 Q6ZQT0 140 aa6.74□□□□□ -1.33
USB1-205ENST00000561743 RBM12B-AS1Q9P1G2 102 aa6.74□□□□□ -1.33
USB1-205ENST00000561743 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
USB1-205ENST00000561743 A0A1B0GV90 55 aa6.72□□□□□ -1.33
USB1-205ENST00000561743 ATXN8Q156A1 80 aa6.71□□□□□ -1.34
USB1-205ENST00000561743 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.34
USB1-205ENST00000561743 MT2AP02795 61 aa6.7□□□□□ -1.34
USB1-205ENST00000561743 USH2AO75445 5202 aa6.7□□□□□ -1.34
USB1-205ENST00000561743 LOC110117498A0A087WWA1 95 aa6.69□□□□□ -1.34
USB1-205ENST00000561743 JMJD7-PLA2G4BH0Y9G9 81 aa6.69□□□□□ -1.34
USB1-205ENST00000561743 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
USB1-205ENST00000561743 Q8N9P0 234 aaPredicted RBP6.68□□□□□ -1.34
USB1-205ENST00000561743 A0A1B0GW54 56 aa6.67□□□□□ -1.34
USB1-205ENST00000561743 NDUFB1O75438 58 aa6.67□□□□□ -1.34
USB1-205ENST00000561743 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
USB1-205ENST00000561743 A8MWP4 228 aa6.66□□□□□ -1.34
USB1-205ENST00000561743 TAX1BP3O14907 124 aa6.66□□□□□ -1.34
USB1-205ENST00000561743 MT1FP04733 61 aa6.66□□□□□ -1.34
USB1-205ENST00000561743 SPINK7P58062 85 aa6.66□□□□□ -1.34
USB1-205ENST00000561743 IGKV3D-7A0A0C4DH55 119 aa6.65□□□□□ -1.34
USB1-205ENST00000561743 C9orf118A6NHY6 69 aa6.65□□□□□ -1.34
USB1-205ENST00000561743 C14orf132Q9NPU4 83 aa6.65□□□□□ -1.34
USB1-205ENST00000561743 C8orf17Q9NRJ1 99 aa6.65□□□□□ -1.34
USB1-205ENST00000561743 PDE6GP18545 87 aa6.64□□□□□ -1.35
USB1-205ENST00000561743 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
USB1-205ENST00000561743 GTF2H5Q6ZYL4 71 aa6.61□□□□□ -1.35
USB1-205ENST00000561743 Q6ZVQ6 151 aa6.6□□□□□ -1.35
USB1-205ENST00000561743 LCE2BO14633 110 aa6.59□□□□□ -1.35
USB1-205ENST00000561743 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
USB1-205ENST00000561743 PRR15Q8IV56 129 aa6.59□□□□□ -1.35
USB1-205ENST00000561743 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.35
USB1-205ENST00000561743 NREPQ16612 68 aa6.58□□□□□ -1.36
USB1-205ENST00000561743 A0A1W2PPM0 123 aa6.57□□□□□ -1.36
USB1-205ENST00000561743 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
USB1-205ENST00000561743 MMP24-AS1A0A0U1RRL7 71 aa6.56□□□□□ -1.36
USB1-205ENST00000561743 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
USB1-205ENST00000561743 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
USB1-205ENST00000561743 H3BT86 120 aa6.53□□□□□ -1.36
USB1-205ENST00000561743 K7EP34 96 aa6.53□□□□□ -1.36
USB1-205ENST00000561743 MRPL34Q9BQ48 92 aaKnown RBP6.53□□□□□ -1.36
USB1-205ENST00000561743 SPCS1Q9Y6A9 102 aa6.53□□□□□ -1.36
USB1-205ENST00000561743 K7EQZ3 153 aa6.52□□□□□ -1.37
USB1-205ENST00000561743 hDV103S1A0JD37 113 aa6.5□□□□□ -1.37
USB1-205ENST00000561743 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
USB1-205ENST00000561743 F8W1H4 67 aa6.49□□□□□ -1.37
USB1-205ENST00000561743 FCGBPQ9Y6R7 5405 aaPredicted RBP6.48□□□□□ -1.37
USB1-205ENST00000561743 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
USB1-205ENST00000561743 NDUFS5O43920 106 aa6.47□□□□□ -1.37
USB1-205ENST00000561743 BPY2O14599 106 aa6.45□□□□□ -1.38
USB1-205ENST00000561743 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
USB1-205ENST00000561743 Q5W150 140 aa6.43□□□□□ -1.38
USB1-205ENST00000561743 IGKV2D-30A0A075B6S6 120 aa6.41□□□□□ -1.38
USB1-205ENST00000561743 IGKV2-30P06310 120 aa6.41□□□□□ -1.38
USB1-205ENST00000561743 Q8N9L7 120 aa6.41□□□□□ -1.38
USB1-205ENST00000561743 C7orf65Q6ZTY9 151 aa6.4□□□□□ -1.38
USB1-205ENST00000561743 K7ERU9 68 aa6.39□□□□□ -1.39
USB1-205ENST00000561743 SMCPP49901 116 aaPredicted RBP6.39□□□□□ -1.39
USB1-205ENST00000561743 CASC2Q6XLA1 102 aa6.39□□□□□ -1.39
USB1-205ENST00000561743 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
USB1-205ENST00000561743 J3QR89 54 aa6.37□□□□□ -1.39
USB1-205ENST00000561743 PRO0461Q9UI25 63 aa6.37□□□□□ -1.39
USB1-205ENST00000561743 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
USB1-205ENST00000561743 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
USB1-205ENST00000561743 LINC00846Q9NV44 126 aa6.33□□□□□ -1.4
USB1-205ENST00000561743 CXCL6P80162 114 aa6.32□□□□□ -1.4
USB1-205ENST00000561743 C4orf26Q17RF5 130 aa6.32□□□□□ -1.4
USB1-205ENST00000561743 UBL5Q9BZL1 73 aa6.3□□□□□ -1.4
USB1-205ENST00000561743 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
USB1-205ENST00000561743 KRTAP3-1Q9BYR8 98 aa6.23□□□□□ -1.41
USB1-205ENST00000561743 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
USB1-205ENST00000561743 C5orf47Q569G3 176 aa6.21□□□□□ -1.42
USB1-205ENST00000561743 ACYP1P07311 99 aa6.2□□□□□ -1.42
USB1-205ENST00000561743 C1orf64Q8NEQ6 169 aa6.18□□□□□ -1.42
USB1-205ENST00000561743 S4R3F8 94 aa6.18□□□□□ -1.42
USB1-205ENST00000561743 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
USB1-205ENST00000561743 FAM240AA0A1B0GVK7 77 aa6.16□□□□□ -1.42
USB1-205ENST00000561743 LCA10Q71F78 164 aa6.16□□□□□ -1.42
USB1-205ENST00000561743 FAM236AA0A1B0GUQ0 79 aa6.15□□□□□ -1.42
USB1-205ENST00000561743 FAM236BA0A1B0GV22 79 aa6.15□□□□□ -1.42
USB1-205ENST00000561743 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
USB1-205ENST00000561743 SVIPQ8NHG7 77 aa6.12□□□□□ -1.43
USB1-205ENST00000561743 MT1BP07438 61 aa6.09□□□□□ -1.43
USB1-205ENST00000561743 SCGB1A1P11684 91 aa6.08□□□□□ -1.44
USB1-205ENST00000561743 KRTAP6-3Q3LI67 103 aa6.08□□□□□ -1.44
USB1-205ENST00000561743 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
USB1-205ENST00000561743 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
USB1-205ENST00000561743 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
USB1-205ENST00000561743 LINC00643Q86TS7 51 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms