RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TNXBP22105 4242 aa5.91□□□□□ -1.46
TPM1-229ENST00000561242 XP32Q5T750 250 aa5.9□□□□□ -1.46
TPM1-229ENST00000561242 ETDBQ3ZM63 59 aa5.89□□□□□ -1.47
TPM1-229ENST00000561242 LINC00472Q9H8W2 130 aa5.89□□□□□ -1.47
TPM1-229ENST00000561242 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
TPM1-229ENST00000561242 A0A1B0GVX0 72 aa5.88□□□□□ -1.47
TPM1-229ENST00000561242 DSCR10P59022 87 aa5.88□□□□□ -1.47
TPM1-229ENST00000561242 KRTAP4-6Q9BYQ5 205 aa5.88□□□□□ -1.47
TPM1-229ENST00000561242 A8MWP4 228 aa5.86□□□□□ -1.47
TPM1-229ENST00000561242 J3QR89 54 aa5.86□□□□□ -1.47
TPM1-229ENST00000561242 ACYP1P07311 99 aa5.86□□□□□ -1.47
TPM1-229ENST00000561242 PRO0461Q9UI25 63 aa5.86□□□□□ -1.47
TPM1-229ENST00000561242 UBR4Q5T4S7 5183 aa5.85□□□□□ -1.47
TPM1-229ENST00000561242 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
TPM1-229ENST00000561242 PCOTHQ58A44 107 aa5.84□□□□□ -1.47
TPM1-229ENST00000561242 A0A1B0GV90 55 aa5.83□□□□□ -1.48
TPM1-229ENST00000561242 NDUFS5O43920 106 aa5.83□□□□□ -1.48
TPM1-229ENST00000561242 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
TPM1-229ENST00000561242 Q6ZVQ6 151 aa5.83□□□□□ -1.48
TPM1-229ENST00000561242 Q75L30 129 aa5.83□□□□□ -1.48
TPM1-229ENST00000561242 PRR15Q8IV56 129 aa5.81□□□□□ -1.48
TPM1-229ENST00000561242 C8orf17Q9NRJ1 99 aa5.8□□□□□ -1.48
TPM1-229ENST00000561242 LINC00846Q9NV44 126 aa5.79□□□□□ -1.48
TPM1-229ENST00000561242 IGKV3D-7A0A0C4DH55 119 aa5.77□□□□□ -1.49
TPM1-229ENST00000561242 hDV103S1A0JD37 113 aa5.77□□□□□ -1.49
TPM1-229ENST00000561242 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
TPM1-229ENST00000561242 A8MUU9 505 aa5.75□□□□□ -1.49
TPM1-229ENST00000561242 CASC2Q6XLA1 102 aa5.75□□□□□ -1.49
TPM1-229ENST00000561242 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
TPM1-229ENST00000561242 MRPL34Q9BQ48 92 aaKnown RBP5.75□□□□□ -1.49
TPM1-229ENST00000561242 FAM240AA0A1B0GVK7 77 aa5.74□□□□□ -1.49
TPM1-229ENST00000561242 K7EQZ3 153 aa5.74□□□□□ -1.49
TPM1-229ENST00000561242 CXCL6P80162 114 aa5.74□□□□□ -1.49
TPM1-229ENST00000561242 TMEM254Q8TBM7 123 aa5.74□□□□□ -1.49
TPM1-229ENST00000561242 ATP5EP2Q5VTU8 51 aa5.73□□□□□ -1.49
TPM1-229ENST00000561242 WFDC13Q8IUB5 93 aa5.73□□□□□ -1.49
TPM1-229ENST00000561242 HIST1H4AP62805 103 aaKnown RBP5.71□□□□□ -1.5
TPM1-229ENST00000561242 NOTCH2NLQ7Z3S9 236 aa5.71□□□□□ -1.5
TPM1-229ENST00000561242 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.5
TPM1-229ENST00000561242 FAM236DA0A1B0GTK5 79 aa5.7□□□□□ -1.5
TPM1-229ENST00000561242 HCG22E2RYF7 251 aa5.7□□□□□ -1.5
TPM1-229ENST00000561242 FAM236CP0DP71 79 aa5.7□□□□□ -1.5
TPM1-229ENST00000561242 Q8N9L7 120 aa5.7□□□□□ -1.5
TPM1-229ENST00000561242 ZCCHC13Q8WW36 166 aaKnown RBP5.69□□□□□ -1.5
TPM1-229ENST00000561242 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
TPM1-229ENST00000561242 MMP24-AS1A0A0U1RRL7 71 aa5.68□□□□□ -1.5
TPM1-229ENST00000561242 LINC00643Q86TS7 51 aa5.68□□□□□ -1.5
TPM1-229ENST00000561242 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
TPM1-229ENST00000561242 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
TPM1-229ENST00000561242 K7ERU9 68 aa5.66□□□□□ -1.5
TPM1-229ENST00000561242 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
TPM1-229ENST00000561242 M0R2T5 61 aa5.62□□□□□ -1.51
TPM1-229ENST00000561242 SCGB1A1P11684 91 aa5.62□□□□□ -1.51
TPM1-229ENST00000561242 SPINK7P58062 85 aa5.61□□□□□ -1.51
TPM1-229ENST00000561242 LPAP08519 4548 aa5.6□□□□□ -1.51
TPM1-229ENST00000561242 LRP2P98164 4655 aa5.59□□□□□ -1.51
TPM1-229ENST00000561242 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
TPM1-229ENST00000561242 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
TPM1-229ENST00000561242 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
TPM1-229ENST00000561242 KRTAP4-1Q9BYQ7 146 aa5.56□□□□□ -1.52
TPM1-229ENST00000561242 UQCRQO14949 82 aa5.53□□□□□ -1.52
TPM1-229ENST00000561242 ATOX1O00244 68 aa5.52□□□□□ -1.53
TPM1-229ENST00000561242 MP68P56378 58 aa5.52□□□□□ -1.53
TPM1-229ENST00000561242 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
TPM1-229ENST00000561242 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
TPM1-229ENST00000561242 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
TPM1-229ENST00000561242 IMUPQ9GZP8 106 aa5.49□□□□□ -1.53
TPM1-229ENST00000561242 A0A087WVE0 104 aa5.48□□□□□ -1.53
TPM1-229ENST00000561242 Q5W150 140 aa5.48□□□□□ -1.53
TPM1-229ENST00000561242 LOC101927531A0A1B0GV80 90 aa5.47□□□□□ -1.53
TPM1-229ENST00000561242 H0Y9P7 68 aa5.46□□□□□ -1.54
TPM1-229ENST00000561242 SMIM20Q8N5G0 67 aa5.46□□□□□ -1.54
TPM1-229ENST00000561242 HRES1P13985 223 aa5.45□□□□□ -1.54
TPM1-229ENST00000561242 C5orf47Q569G3 176 aa5.44□□□□□ -1.54
TPM1-229ENST00000561242 C1orf64Q8NEQ6 169 aa5.42□□□□□ -1.54
TPM1-229ENST00000561242 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
TPM1-229ENST00000561242 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
TPM1-229ENST00000561242 H3BPC8 53 aa5.4□□□□□ -1.54
TPM1-229ENST00000561242 MT-ATP8P03928 68 aa5.4□□□□□ -1.54
TPM1-229ENST00000561242 C4orf26Q17RF5 130 aa5.4□□□□□ -1.54
TPM1-229ENST00000561242 LINC00208Q96KT6 92 aa5.4□□□□□ -1.54
TPM1-229ENST00000561242 MT1HP80294 61 aa5.38□□□□□ -1.55
TPM1-229ENST00000561242 CYP4F30PQ9H0H9 118 aa5.38□□□□□ -1.55
TPM1-229ENST00000561242 FAM236AA0A1B0GUQ0 79 aa5.37□□□□□ -1.55
TPM1-229ENST00000561242 FAM236BA0A1B0GV22 79 aa5.37□□□□□ -1.55
TPM1-229ENST00000561242 MPLKIPQ8TAP9 179 aa5.36□□□□□ -1.55
TPM1-229ENST00000561242 MUC2Q02817 5179 aa5.34□□□□□ -1.55
TPM1-229ENST00000561242 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.55
TPM1-229ENST00000561242 TRAV7A0A075B6U4 112 aa5.33□□□□□ -1.56
TPM1-229ENST00000561242 OCR1Q9BZK8 76 aa5.33□□□□□ -1.56
TPM1-229ENST00000561242 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
TPM1-229ENST00000561242 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
TPM1-229ENST00000561242 S4R3F8 94 aa5.31□□□□□ -1.56
TPM1-229ENST00000561242 A8MUN3 132 aa5.29□□□□□ -1.56
TPM1-229ENST00000561242 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
TPM1-229ENST00000561242 CSAG1Q6PB30 78 aa5.28□□□□□ -1.56
TPM1-229ENST00000561242 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
TPM1-229ENST00000561242 NDUFC1O43677 76 aa5.26□□□□□ -1.57
TPM1-229ENST00000561242 SERP2Q8N6R1 65 aa5.23□□□□□ -1.57
TPM1-229ENST00000561242 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms