RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 A0A1B0GW54 56 aa8□□□□□ -1.13
SNRPA1-213ENST00000560856 LINC00313P59037 77 aa8□□□□□ -1.13
SNRPA1-213ENST00000560856 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
SNRPA1-213ENST00000560856 MTURNQ8N3F0 131 aa8□□□□□ -1.13
SNRPA1-213ENST00000560856 COL5A1-AS1Q5SY13 56 aa7.97□□□□□ -1.13
SNRPA1-213ENST00000560856 IGHV6-1A0A0B4J1U7 121 aa7.96□□□□□ -1.14
SNRPA1-213ENST00000560856 A0A1B0GVX0 72 aa7.96□□□□□ -1.14
SNRPA1-213ENST00000560856 SPCS1Q9Y6A9 102 aa7.96□□□□□ -1.14
SNRPA1-213ENST00000560856 J3KT08 172 aa7.95□□□□□ -1.14
SNRPA1-213ENST00000560856 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
SNRPA1-213ENST00000560856 PCP4L1A6NKN8 68 aa7.93□□□□□ -1.14
SNRPA1-213ENST00000560856 C8orf87E5RJ46 101 aa7.92□□□□□ -1.14
SNRPA1-213ENST00000560856 MT1HP80294 61 aa7.92□□□□□ -1.14
SNRPA1-213ENST00000560856 PRO0461Q9UI25 63 aa7.9□□□□□ -1.14
SNRPA1-213ENST00000560856 FLGP20930 4061 aaPredicted RBP7.89□□□□□ -1.15
SNRPA1-213ENST00000560856 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
SNRPA1-213ENST00000560856 A8MWP4 228 aa7.88□□□□□ -1.15
SNRPA1-213ENST00000560856 K7EP34 96 aa7.87□□□□□ -1.15
SNRPA1-213ENST00000560856 NREPQ16612 68 aa7.87□□□□□ -1.15
SNRPA1-213ENST00000560856 NDUFB1O75438 58 aa7.86□□□□□ -1.15
SNRPA1-213ENST00000560856 C8orf17Q9NRJ1 99 aa7.84□□□□□ -1.15
SNRPA1-213ENST00000560856 PRR15Q8IV56 129 aa7.83□□□□□ -1.16
SNRPA1-213ENST00000560856 Q8N9P0 234 aaPredicted RBP7.83□□□□□ -1.16
SNRPA1-213ENST00000560856 COX6B2Q6YFQ2 88 aa7.81□□□□□ -1.16
SNRPA1-213ENST00000560856 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
SNRPA1-213ENST00000560856 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.17
SNRPA1-213ENST00000560856 Q6ZVQ6 151 aa7.77□□□□□ -1.17
SNRPA1-213ENST00000560856 ZCCHC13Q8WW36 166 aaKnown RBP7.77□□□□□ -1.17
SNRPA1-213ENST00000560856 GTF2H5Q6ZYL4 71 aa7.76□□□□□ -1.17
SNRPA1-213ENST00000560856 K7EQZ3 153 aa7.75□□□□□ -1.17
SNRPA1-213ENST00000560856 HRES1P13985 223 aa7.75□□□□□ -1.17
SNRPA1-213ENST00000560856 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
SNRPA1-213ENST00000560856 LORP23490 312 aaPredicted RBP7.74□□□□□ -1.17
SNRPA1-213ENST00000560856 KRTAP10-6P60371 365 aaPredicted RBP7.74□□□□□ -1.17
SNRPA1-213ENST00000560856 BPY2O14599 106 aa7.73□□□□□ -1.17
SNRPA1-213ENST00000560856 F8W1H4 67 aa7.72□□□□□ -1.17
SNRPA1-213ENST00000560856 TMEM254Q8TBM7 123 aa7.72□□□□□ -1.17
SNRPA1-213ENST00000560856 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
SNRPA1-213ENST00000560856 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
SNRPA1-213ENST00000560856 LINC00846Q9NV44 126 aa7.72□□□□□ -1.17
SNRPA1-213ENST00000560856 MRPL34Q9BQ48 92 aaKnown RBP7.7□□□□□ -1.18
SNRPA1-213ENST00000560856 hDV103S1A0JD37 113 aa7.69□□□□□ -1.18
SNRPA1-213ENST00000560856 M0R2T5 61 aa7.69□□□□□ -1.18
SNRPA1-213ENST00000560856 ETDBQ3ZM63 59 aa7.68□□□□□ -1.18
SNRPA1-213ENST00000560856 Q8N9L7 120 aa7.68□□□□□ -1.18
SNRPA1-213ENST00000560856 SPINK7P58062 85 aa7.67□□□□□ -1.18
SNRPA1-213ENST00000560856 KRTAP9-6A0A140TA67 174 aa7.66□□□□□ -1.18
SNRPA1-213ENST00000560856 UBL5Q9BZL1 73 aa7.65□□□□□ -1.18
SNRPA1-213ENST00000560856 RBM12B-AS1Q9P1G2 102 aa7.62□□□□□ -1.19
SNRPA1-213ENST00000560856 WFDC13Q8IUB5 93 aa7.61□□□□□ -1.19
SNRPA1-213ENST00000560856 FAM236DA0A1B0GTK5 79 aa7.6□□□□□ -1.19
SNRPA1-213ENST00000560856 FAM236CP0DP71 79 aa7.6□□□□□ -1.19
SNRPA1-213ENST00000560856 Q5W150 140 aa7.59□□□□□ -1.19
SNRPA1-213ENST00000560856 CASC2Q6XLA1 102 aa7.59□□□□□ -1.19
SNRPA1-213ENST00000560856 NDUFS5O43920 106 aa7.58□□□□□ -1.2
SNRPA1-213ENST00000560856 KRTAP9-8Q9BYQ0 159 aa7.55□□□□□ -1.2
SNRPA1-213ENST00000560856 HCG22E2RYF7 251 aa7.54□□□□□ -1.2
SNRPA1-213ENST00000560856 CXCL6P80162 114 aa7.53□□□□□ -1.2
SNRPA1-213ENST00000560856 A0A1B0GV90 55 aa7.49□□□□□ -1.21
SNRPA1-213ENST00000560856 FAM240AA0A1B0GVK7 77 aa7.47□□□□□ -1.21
SNRPA1-213ENST00000560856 ACYP1P07311 99 aa7.47□□□□□ -1.21
SNRPA1-213ENST00000560856 IGKV2D-30A0A075B6S6 120 aa7.46□□□□□ -1.22
SNRPA1-213ENST00000560856 IGKV2-30P06310 120 aa7.46□□□□□ -1.22
SNRPA1-213ENST00000560856 C7orf65Q6ZTY9 151 aa7.45□□□□□ -1.22
SNRPA1-213ENST00000560856 MT2AP02795 61 aa7.43□□□□□ -1.22
SNRPA1-213ENST00000560856 SVIPQ8NHG7 77 aa7.43□□□□□ -1.22
SNRPA1-213ENST00000560856 MT1FP04733 61 aa7.38□□□□□ -1.23
SNRPA1-213ENST00000560856 H1FX-AS1Q4G0G2 97 aa7.38□□□□□ -1.23
SNRPA1-213ENST00000560856 TP53AIP1Q9HCN2 124 aa7.38□□□□□ -1.23
SNRPA1-213ENST00000560856 CRCT1Q9UGL9 99 aa7.38□□□□□ -1.23
SNRPA1-213ENST00000560856 ATP5EP2Q5VTU8 51 aa7.37□□□□□ -1.23
SNRPA1-213ENST00000560856 FSIP2Q5CZC0 6907 aa7.34□□□□□ -1.23
SNRPA1-213ENST00000560856 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
SNRPA1-213ENST00000560856 LINC00643Q86TS7 51 aa7.32□□□□□ -1.24
SNRPA1-213ENST00000560856 KRTAP9-3Q9BYQ3 159 aa7.31□□□□□ -1.24
SNRPA1-213ENST00000560856 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
SNRPA1-213ENST00000560856 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
SNRPA1-213ENST00000560856 HIST1H4AP62805 103 aaKnown RBP7.29□□□□□ -1.24
SNRPA1-213ENST00000560856 PCP4P48539 62 aa7.28□□□□□ -1.24
SNRPA1-213ENST00000560856 A0A087WVE0 104 aa7.26□□□□□ -1.25
SNRPA1-213ENST00000560856 USH2AO75445 5202 aa7.26□□□□□ -1.25
SNRPA1-213ENST00000560856 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
SNRPA1-213ENST00000560856 TRAV22A0A0B4J277 110 aa7.24□□□□□ -1.25
SNRPA1-213ENST00000560856 LCE2BO14633 110 aa7.24□□□□□ -1.25
SNRPA1-213ENST00000560856 C1orf64Q8NEQ6 169 aa7.22□□□□□ -1.25
SNRPA1-213ENST00000560856 UQCRQO14949 82 aa7.21□□□□□ -1.26
SNRPA1-213ENST00000560856 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
SNRPA1-213ENST00000560856 J3QR89 54 aa7.18□□□□□ -1.26
SNRPA1-213ENST00000560856 SSPOA2VEC9 5147 aa7.16□□□□□ -1.26
SNRPA1-213ENST00000560856 H0Y9P7 68 aa7.15□□□□□ -1.26
SNRPA1-213ENST00000560856 OCR1Q9BZK8 76 aa7.14□□□□□ -1.27
SNRPA1-213ENST00000560856 S4R3F8 94 aa7.13□□□□□ -1.27
SNRPA1-213ENST00000560856 ATOX1O00244 68 aa7.12□□□□□ -1.27
SNRPA1-213ENST00000560856 C5orf47Q569G3 176 aa7.12□□□□□ -1.27
SNRPA1-213ENST00000560856 LCA10Q71F78 164 aa7.12□□□□□ -1.27
SNRPA1-213ENST00000560856 CSAG1Q6PB30 78 aa7.07□□□□□ -1.28
SNRPA1-213ENST00000560856 LINC00208Q96KT6 92 aa7.06□□□□□ -1.28
SNRPA1-213ENST00000560856 KLKP1Q107X0 134 aa7.04□□□□□ -1.28
SNRPA1-213ENST00000560856 K7ERU9 68 aa7.03□□□□□ -1.28
SNRPA1-213ENST00000560856 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms