RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 C20orf166-AS1Q96NR2 134 aa9.2□□□□□ -0.94
RPL28-210ENST00000560583 TRBV20-1A0A075B6N2 111 aa9.19□□□□□ -0.94
RPL28-210ENST00000560583 LINC00313P59037 77 aa9.19□□□□□ -0.94
RPL28-210ENST00000560583 A8MUU9 505 aa9.18□□□□□ -0.94
RPL28-210ENST00000560583 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
RPL28-210ENST00000560583 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
RPL28-210ENST00000560583 C9orf118A6NHY6 69 aa9.13□□□□□ -0.95
RPL28-210ENST00000560583 PDE6GP18545 87 aa9.13□□□□□ -0.95
RPL28-210ENST00000560583 C14orf132Q9NPU4 83 aa9.12□□□□□ -0.95
RPL28-210ENST00000560583 USH2AO75445 5202 aa9.11□□□□□ -0.95
RPL28-210ENST00000560583 J3KT08 172 aa9.11□□□□□ -0.95
RPL28-210ENST00000560583 Q6ZQT0 140 aa9.11□□□□□ -0.95
RPL28-210ENST00000560583 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
RPL28-210ENST00000560583 KRTAP9-8Q9BYQ0 159 aa9.11□□□□□ -0.95
RPL28-210ENST00000560583 LOC110117498A0A087WWA1 95 aa9.1□□□□□ -0.95
RPL28-210ENST00000560583 A0A1W2PPM0 123 aa9.09□□□□□ -0.95
RPL28-210ENST00000560583 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
RPL28-210ENST00000560583 A0A1B0GVX0 72 aa9.08□□□□□ -0.96
RPL28-210ENST00000560583 NDUFB1O75438 58 aa9.08□□□□□ -0.96
RPL28-210ENST00000560583 A0A1B0GW54 56 aa9.07□□□□□ -0.96
RPL28-210ENST00000560583 KRTAP16-1A8MUX0 517 aa9.07□□□□□ -0.96
RPL28-210ENST00000560583 SSPOA2VEC9 5147 aa9.07□□□□□ -0.96
RPL28-210ENST00000560583 NOTCH2NLQ7Z3S9 236 aa9.06□□□□□ -0.96
RPL28-210ENST00000560583 H3BT86 120 aa9.05□□□□□ -0.96
RPL28-210ENST00000560583 K7EP34 96 aa9.05□□□□□ -0.96
RPL28-210ENST00000560583 MTURNQ8N3F0 131 aa9.05□□□□□ -0.96
RPL28-210ENST00000560583 K7ERU9 68 aa9.03□□□□□ -0.96
RPL28-210ENST00000560583 SPCS1Q9Y6A9 102 aa9.01□□□□□ -0.97
RPL28-210ENST00000560583 NREPQ16612 68 aa9□□□□□ -0.97
RPL28-210ENST00000560583 A8MWP4 228 aa8.97□□□□□ -0.97
RPL28-210ENST00000560583 MPLKIPQ8TAP9 179 aa8.97□□□□□ -0.97
RPL28-210ENST00000560583 MT2AP02795 61 aa8.96□□□□□ -0.98
RPL28-210ENST00000560583 HRES1P13985 223 aa8.96□□□□□ -0.98
RPL28-210ENST00000560583 F8W1H4 67 aa8.95□□□□□ -0.98
RPL28-210ENST00000560583 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
RPL28-210ENST00000560583 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
RPL28-210ENST00000560583 C8orf17Q9NRJ1 99 aa8.93□□□□□ -0.98
RPL28-210ENST00000560583 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.92□□□□□ -0.98
RPL28-210ENST00000560583 IGKV3D-7A0A0C4DH55 119 aa8.91□□□□□ -0.98
RPL28-210ENST00000560583 MT1FP04733 61 aa8.91□□□□□ -0.98
RPL28-210ENST00000560583 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
RPL28-210ENST00000560583 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
RPL28-210ENST00000560583 PRR15Q8IV56 129 aa8.88□□□□□ -0.99
RPL28-210ENST00000560583 J3QR89 54 aa8.87□□□□□ -0.99
RPL28-210ENST00000560583 PCP4P48539 62 aa8.86□□□□□ -0.99
RPL28-210ENST00000560583 Q6ZVQ6 151 aa8.86□□□□□ -0.99
RPL28-210ENST00000560583 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
RPL28-210ENST00000560583 BPY2O14599 106 aa8.85□□□□□ -0.99
RPL28-210ENST00000560583 LCE2BO14633 110 aa8.85□□□□□ -0.99
RPL28-210ENST00000560583 KRTAP9-7A8MTY7 169 aa8.84□□□□□ -0.99
RPL28-210ENST00000560583 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
RPL28-210ENST00000560583 PRO0461Q9UI25 63 aa8.84□□□□□ -0.99
RPL28-210ENST00000560583 SMCPP49901 116 aaPredicted RBP8.82□□□□□ -1
RPL28-210ENST00000560583 KRTAP9-3Q9BYQ3 159 aa8.82□□□□□ -1
RPL28-210ENST00000560583 K7EQZ3 153 aa8.81□□□□□ -1
RPL28-210ENST00000560583 NDUFS5O43920 106 aa8.81□□□□□ -1
RPL28-210ENST00000560583 SCGB1A1P11684 91 aa8.81□□□□□ -1
RPL28-210ENST00000560583 TMEM254Q8TBM7 123 aa8.81□□□□□ -1
RPL28-210ENST00000560583 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
RPL28-210ENST00000560583 MRPL34Q9BQ48 92 aaKnown RBP8.8□□□□□ -1
RPL28-210ENST00000560583 hDV103S1A0JD37 113 aa8.79□□□□□ -1
RPL28-210ENST00000560583 SPINK7P58062 85 aa8.78□□□□□ -1
RPL28-210ENST00000560583 KRTAP10-10P60014 251 aa8.77□□□□□ -1.01
RPL28-210ENST00000560583 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
RPL28-210ENST00000560583 UBL5Q9BZL1 73 aa8.76□□□□□ -1.01
RPL28-210ENST00000560583 WFDC13Q8IUB5 93 aa8.72□□□□□ -1.01
RPL28-210ENST00000560583 Q8N9L7 120 aa8.72□□□□□ -1.01
RPL28-210ENST00000560583 ETDBQ3ZM63 59 aa8.69□□□□□ -1.02
RPL28-210ENST00000560583 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
RPL28-210ENST00000560583 LINC00846Q9NV44 126 aa8.69□□□□□ -1.02
RPL28-210ENST00000560583 HCG22E2RYF7 251 aa8.64□□□□□ -1.03
RPL28-210ENST00000560583 MACF1Q9UPN3 7388 aaKnown RBP8.64□□□□□ -1.03
RPL28-210ENST00000560583 IGKV2D-30A0A075B6S6 120 aa8.61□□□□□ -1.03
RPL28-210ENST00000560583 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
RPL28-210ENST00000560583 SYNE2Q8WXH0 6885 aaKnown RBP8.6□□□□□ -1.03
RPL28-210ENST00000560583 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
RPL28-210ENST00000560583 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
RPL28-210ENST00000560583 CXCL6P80162 114 aa8.57□□□□□ -1.04
RPL28-210ENST00000560583 KRTAP19-6Q3LI70 58 aa8.55□□□□□ -1.04
RPL28-210ENST00000560583 Q5W150 140 aa8.54□□□□□ -1.04
RPL28-210ENST00000560583 ACYP1P07311 99 aa8.5□□□□□ -1.05
RPL28-210ENST00000560583 H1FX-AS1Q4G0G2 97 aa8.47□□□□□ -1.05
RPL28-210ENST00000560583 TP53AIP1Q9HCN2 124 aa8.44□□□□□ -1.06
RPL28-210ENST00000560583 MT-ATP8P03928 68 aa8.43□□□□□ -1.06
RPL28-210ENST00000560583 IMUPQ9GZP8 106 aa8.43□□□□□ -1.06
RPL28-210ENST00000560583 C4orf26Q17RF5 130 aa8.41□□□□□ -1.06
RPL28-210ENST00000560583 ATP5EP2Q5VTU8 51 aa8.38□□□□□ -1.07
RPL28-210ENST00000560583 HIST1H4AP62805 103 aaKnown RBP8.36□□□□□ -1.07
RPL28-210ENST00000560583 LINC00643Q86TS7 51 aa8.34□□□□□ -1.07
RPL28-210ENST00000560583 C1orf64Q8NEQ6 169 aa8.28□□□□□ -1.08
RPL28-210ENST00000560583 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
RPL28-210ENST00000560583 TRAV22A0A0B4J277 110 aa8.27□□□□□ -1.09
RPL28-210ENST00000560583 KRTAP6-3Q3LI67 103 aa8.24□□□□□ -1.09
RPL28-210ENST00000560583 S4R3F8 94 aa8.24□□□□□ -1.09
RPL28-210ENST00000560583 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
RPL28-210ENST00000560583 C5orf47Q569G3 176 aa8.22□□□□□ -1.09
RPL28-210ENST00000560583 UQCRQO14949 82 aa8.21□□□□□ -1.1
RPL28-210ENST00000560583 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.1
RPL28-210ENST00000560583 A0A087WVE0 104 aa8.19□□□□□ -1.1
RPL28-210ENST00000560583 H0Y9P7 68 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms