RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 HIVEP2P31629 2446 aa3.47□□□□□ -1.85
SNRPA1-209ENST00000560307 CFAP46Q8IYW2 2715 aa3.46□□□□□ -1.86
SNRPA1-209ENST00000560307 PKD1L2Q7Z442 2459 aa3.46□□□□□ -1.86
SNRPA1-209ENST00000560307 Q5W150 140 aa3.46□□□□□ -1.86
SNRPA1-209ENST00000560307 ADM2Q7Z4H4 148 aa3.46□□□□□ -1.86
SNRPA1-209ENST00000560307 ZFYVE26Q68DK2 2539 aa3.46□□□□□ -1.86
SNRPA1-209ENST00000560307 FLNCQ14315 2725 aa3.45□□□□□ -1.86
SNRPA1-209ENST00000560307 TENM2Q9NT68 2774 aa3.45□□□□□ -1.86
SNRPA1-209ENST00000560307 NIPBLQ6KC79 2804 aaeCLIP3.45□□□□□ -1.86
SNRPA1-209ENST00000560307 NBEAL2Q6ZNJ1 2754 aa3.45□□□□□ -1.86
SNRPA1-209ENST00000560307 ZNF861PO60384 105 aa3.44□□□□□ -1.86
SNRPA1-209ENST00000560307 IGLV7-43P04211 117 aa3.44□□□□□ -1.86
SNRPA1-209ENST00000560307 SPACA4Q8TDM5 124 aa3.44□□□□□ -1.86
SNRPA1-209ENST00000560307 CSMD2Q7Z408 3487 aa3.43□□□□□ -1.86
SNRPA1-209ENST00000560307 CSAG1Q6PB30 78 aa3.43□□□□□ -1.86
SNRPA1-209ENST00000560307 SSBP3-AS1Q7Z2R9 100 aa3.43□□□□□ -1.86
SNRPA1-209ENST00000560307 IGSF10Q6WRI0 2623 aa3.43□□□□□ -1.86
SNRPA1-209ENST00000560307 POLQO75417 2590 aa3.43□□□□□ -1.86
SNRPA1-209ENST00000560307 SPTBN4Q9H254 2564 aa3.43□□□□□ -1.86
SNRPA1-209ENST00000560307 HIVEP1P15822 2718 aa3.42□□□□□ -1.86
SNRPA1-209ENST00000560307 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
SNRPA1-209ENST00000560307 K7EIL1 84 aa3.42□□□□□ -1.86
SNRPA1-209ENST00000560307 SMR3AQ99954 134 aa3.42□□□□□ -1.86
SNRPA1-209ENST00000560307 FLNAP21333 2647 aaKnown RBP3.42□□□□□ -1.86
SNRPA1-209ENST00000560307 NF1P21359 2839 aa3.42□□□□□ -1.86
SNRPA1-209ENST00000560307 CHD8Q9HCK8 2581 aa3.42□□□□□ -1.86
SNRPA1-209ENST00000560307 ACACBO00763 2458 aa3.42□□□□□ -1.86
SNRPA1-209ENST00000560307 KMT2BQ9UMN6 2715 aaPredicted RBP3.41□□□□□ -1.86
SNRPA1-209ENST00000560307 PDZD2O15018 2839 aa3.4□□□□□ -1.86
SNRPA1-209ENST00000560307 SONP18583 2426 aaKnown RBP3.4□□□□□ -1.86
SNRPA1-209ENST00000560307 LY6G6CO95867 125 aa3.4□□□□□ -1.87
SNRPA1-209ENST00000560307 UBE2DNLQ8IWF7 75 aa3.4□□□□□ -1.87
SNRPA1-209ENST00000560307 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.87
SNRPA1-209ENST00000560307 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
SNRPA1-209ENST00000560307 APLNQ9ULZ1 77 aa3.39□□□□□ -1.87
SNRPA1-209ENST00000560307 CACNA1AO00555 2505 aa3.39□□□□□ -1.87
SNRPA1-209ENST00000560307 DNAH3Q8TD57 4116 aa3.38□□□□□ -1.87
SNRPA1-209ENST00000560307 KRTAP16-1A8MUX0 517 aa3.38□□□□□ -1.87
SNRPA1-209ENST00000560307 Q6ZRN7 208 aaPredicted RBP3.38□□□□□ -1.87
SNRPA1-209ENST00000560307 PSORS1C2Q9UIG4 136 aa3.38□□□□□ -1.87
SNRPA1-209ENST00000560307 MYO18BQ8IUG5 2567 aa3.38□□□□□ -1.87
SNRPA1-209ENST00000560307 FAM208BQ5VWN6 2430 aa3.38□□□□□ -1.87
SNRPA1-209ENST00000560307 PIEZO1Q92508 2521 aa3.37□□□□□ -1.87
SNRPA1-209ENST00000560307 A8MUU9 505 aa3.37□□□□□ -1.87
SNRPA1-209ENST00000560307 PANO1I0J062 215 aa3.37□□□□□ -1.87
SNRPA1-209ENST00000560307 ZNF469Q96JG9 3925 aaPredicted RBP3.37□□□□□ -1.87
SNRPA1-209ENST00000560307 ABCA12Q86UK0 2595 aa3.36□□□□□ -1.87
SNRPA1-209ENST00000560307 UNC79Q9P2D8 2635 aa3.36□□□□□ -1.87
SNRPA1-209ENST00000560307 NBDYA0A0U1RRE5 68 aa3.36□□□□□ -1.87
SNRPA1-209ENST00000560307 J3QKU1 62 aa3.36□□□□□ -1.87
SNRPA1-209ENST00000560307 SPINK6Q6UWN8 80 aa3.36□□□□□ -1.87
SNRPA1-209ENST00000560307 ANK2Q01484 3957 aa3.36□□□□□ -1.87
SNRPA1-209ENST00000560307 CCDC168Q8NDH2 2452 aa3.35□□□□□ -1.87
SNRPA1-209ENST00000560307 DYNC2H1Q8NCM8 4307 aaKnown RBP3.35□□□□□ -1.87
SNRPA1-209ENST00000560307 C1orf134Q5TEV5 83 aa3.35□□□□□ -1.87
SNRPA1-209ENST00000560307 ZNF462Q96JM2 2506 aa3.35□□□□□ -1.87
SNRPA1-209ENST00000560307 CUBNO60494 3623 aa3.34□□□□□ -1.87
SNRPA1-209ENST00000560307 VWFP04275 2813 aa3.34□□□□□ -1.87
SNRPA1-209ENST00000560307 KRTAP10-5P60370 271 aa3.34□□□□□ -1.87
SNRPA1-209ENST00000560307 ROMO1P60602 79 aa3.34□□□□□ -1.87
SNRPA1-209ENST00000560307 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
SNRPA1-209ENST00000560307 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.87
SNRPA1-209ENST00000560307 CENPEQ02224 2701 aa3.34□□□□□ -1.88
SNRPA1-209ENST00000560307 OTOGQ6ZRI0 2925 aa3.33□□□□□ -1.88
SNRPA1-209ENST00000560307 CIRBP-AS1Q8TBR5 109 aa3.33□□□□□ -1.88
SNRPA1-209ENST00000560307 NOTCH2Q04721 2471 aa3.32□□□□□ -1.88
SNRPA1-209ENST00000560307 SETD2Q9BYW2 2564 aaPredicted RBP3.32□□□□□ -1.88
SNRPA1-209ENST00000560307 A0A087WTM6 91 aa3.32□□□□□ -1.88
SNRPA1-209ENST00000560307 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
SNRPA1-209ENST00000560307 HUWE1Q7Z6Z7 4374 aaKnown RBP3.31□□□□□ -1.88
SNRPA1-209ENST00000560307 NUPR2A6NF83 97 aa3.31□□□□□ -1.88
SNRPA1-209ENST00000560307 H0YAA0 97 aa3.3□□□□□ -1.88
SNRPA1-209ENST00000560307 K7ERS5 55 aa3.3□□□□□ -1.88
SNRPA1-209ENST00000560307 LINC00304Q8N9R0 145 aa3.3□□□□□ -1.88
SNRPA1-209ENST00000560307 VPS13DQ5THJ4 4388 aa3.3□□□□□ -1.88
SNRPA1-209ENST00000560307 DNAH10Q8IVF4 4471 aa3.3□□□□□ -1.88
SNRPA1-209ENST00000560307 CMYA5Q8N3K9 4069 aa3.29□□□□□ -1.88
SNRPA1-209ENST00000560307 DNAH8Q96JB1 4490 aa3.29□□□□□ -1.88
SNRPA1-209ENST00000560307 MTORP42345 2549 aa3.29□□□□□ -1.88
SNRPA1-209ENST00000560307 MT3P25713 68 aa3.29□□□□□ -1.88
SNRPA1-209ENST00000560307 Q6ZSA8 131 aa3.29□□□□□ -1.88
SNRPA1-209ENST00000560307 USP24Q9UPU5 2620 aa3.29□□□□□ -1.88
SNRPA1-209ENST00000560307 DNAH9Q9NYC9 4486 aa3.29□□□□□ -1.88
SNRPA1-209ENST00000560307 TENM4Q6N022 2769 aa3.29□□□□□ -1.88
SNRPA1-209ENST00000560307 A0A1B0GU33 70 aa3.28□□□□□ -1.88
SNRPA1-209ENST00000560307 H1FX-AS1Q4G0G2 97 aa3.28□□□□□ -1.88
SNRPA1-209ENST00000560307 PKD1L1Q8TDX9 2849 aa3.28□□□□□ -1.88
SNRPA1-209ENST00000560307 DNAH17Q9UFH2 4485 aa3.28□□□□□ -1.88
SNRPA1-209ENST00000560307 F8P00451 2351 aa3.27□□□□□ -1.89
SNRPA1-209ENST00000560307 TENM3Q9P273 2699 aa3.27□□□□□ -1.89
SNRPA1-209ENST00000560307 TEP1Q99973 2627 aaKnown RBP3.27□□□□□ -1.89
SNRPA1-209ENST00000560307 RPS29P62273 56 aaKnown RBP3.26□□□□□ -1.89
SNRPA1-209ENST00000560307 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
SNRPA1-209ENST00000560307 ACANP16112 2415 aa3.26□□□□□ -1.89
SNRPA1-209ENST00000560307 TENM1Q9UKZ4 2725 aa3.25□□□□□ -1.89
SNRPA1-209ENST00000560307 TRRAPQ9Y4A5 3859 aa3.25□□□□□ -1.89
SNRPA1-209ENST00000560307 PRKDCP78527 4128 aaKnown RBP3.25□□□□□ -1.89
SNRPA1-209ENST00000560307 NSD1Q96L73 2696 aaPredicted RBP3.24□□□□□ -1.89
SNRPA1-209ENST00000560307 KRTAP13-2Q52LG2 175 aa3.24□□□□□ -1.89
SNRPA1-209ENST00000560307 HECTD1Q9ULT8 2610 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms