RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 TRBV20-1A0A075B6N2 111 aa4.64□□□□□ -1.67
USP3-217ENST00000560070 TRBV7-4A0A0J9YYF1 115 aa4.64□□□□□ -1.67
USP3-217ENST00000560070 A0A1W2PPM0 123 aa4.64□□□□□ -1.67
USP3-217ENST00000560070 PCOTHQ58A44 107 aa4.64□□□□□ -1.67
USP3-217ENST00000560070 MTURNQ8N3F0 131 aa4.64□□□□□ -1.67
USP3-217ENST00000560070 OBSCN-AS1Q96MR7 158 aa4.64□□□□□ -1.67
USP3-217ENST00000560070 KRTAP4-1Q9BYQ7 146 aa4.64□□□□□ -1.67
USP3-217ENST00000560070 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
USP3-217ENST00000560070 Q96NJ1 140 aa4.62□□□□□ -1.67
USP3-217ENST00000560070 SIGMAR1Q99720 223 aa4.62□□□□□ -1.67
USP3-217ENST00000560070 DSCR10P59022 87 aa4.61□□□□□ -1.67
USP3-217ENST00000560070 COL5A1-AS1Q5SY13 56 aa4.61□□□□□ -1.67
USP3-217ENST00000560070 JMJD7-PLA2G4BH0Y9G9 81 aa4.6□□□□□ -1.67
USP3-217ENST00000560070 C14orf132Q9NPU4 83 aa4.6□□□□□ -1.67
USP3-217ENST00000560070 SPCS1Q9Y6A9 102 aa4.6□□□□□ -1.67
USP3-217ENST00000560070 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
USP3-217ENST00000560070 MUC2Q02817 5179 aa4.59□□□□□ -1.67
USP3-217ENST00000560070 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
USP3-217ENST00000560070 A0A0U1RQV1 116 aa4.58□□□□□ -1.68
USP3-217ENST00000560070 Q6ZQT0 140 aa4.58□□□□□ -1.68
USP3-217ENST00000560070 LINC00472Q9H8W2 130 aa4.58□□□□□ -1.68
USP3-217ENST00000560070 IGHV6-1A0A0B4J1U7 121 aa4.57□□□□□ -1.68
USP3-217ENST00000560070 LINC00313P59037 77 aa4.57□□□□□ -1.68
USP3-217ENST00000560070 LOC110117498A0A087WWA1 95 aa4.56□□□□□ -1.68
USP3-217ENST00000560070 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
USP3-217ENST00000560070 H3BT86 120 aa4.55□□□□□ -1.68
USP3-217ENST00000560070 PDE6GP18545 87 aa4.55□□□□□ -1.68
USP3-217ENST00000560070 ATP11AUNQ6ZP68 121 aa4.55□□□□□ -1.68
USP3-217ENST00000560070 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
USP3-217ENST00000560070 NREPQ16612 68 aa4.53□□□□□ -1.68
USP3-217ENST00000560070 Q75L30 129 aa4.53□□□□□ -1.68
USP3-217ENST00000560070 K7EP34 96 aa4.52□□□□□ -1.69
USP3-217ENST00000560070 C21orf62-AS1Q17RA5 79 aa4.52□□□□□ -1.69
USP3-217ENST00000560070 A0A1B0GVX0 72 aa4.51□□□□□ -1.69
USP3-217ENST00000560070 A8MUU9 505 aa4.51□□□□□ -1.69
USP3-217ENST00000560070 J3KT08 172 aa4.51□□□□□ -1.69
USP3-217ENST00000560070 NDUFB1O75438 58 aa4.5□□□□□ -1.69
USP3-217ENST00000560070 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
USP3-217ENST00000560070 PRO0461Q9UI25 63 aa4.5□□□□□ -1.69
USP3-217ENST00000560070 A0A1B0GW54 56 aa4.49□□□□□ -1.69
USP3-217ENST00000560070 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
USP3-217ENST00000560070 GTF2H5Q6ZYL4 71 aa4.49□□□□□ -1.69
USP3-217ENST00000560070 IGKV3D-7A0A0C4DH55 119 aa4.48□□□□□ -1.69
USP3-217ENST00000560070 C8orf87E5RJ46 101 aa4.48□□□□□ -1.69
USP3-217ENST00000560070 A8MWP4 228 aa4.46□□□□□ -1.7
USP3-217ENST00000560070 C8orf17Q9NRJ1 99 aa4.46□□□□□ -1.7
USP3-217ENST00000560070 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
USP3-217ENST00000560070 COX6B2Q6YFQ2 88 aa4.45□□□□□ -1.7
USP3-217ENST00000560070 F8W1H4 67 aa4.44□□□□□ -1.7
USP3-217ENST00000560070 BPY2O14599 106 aa4.44□□□□□ -1.7
USP3-217ENST00000560070 KRTAP19-2Q3LHN2 52 aa4.44□□□□□ -1.7
USP3-217ENST00000560070 Q6ZVQ6 151 aa4.44□□□□□ -1.7
USP3-217ENST00000560070 PRR15Q8IV56 129 aa4.44□□□□□ -1.7
USP3-217ENST00000560070 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
USP3-217ENST00000560070 Q8N9L7 120 aa4.43□□□□□ -1.7
USP3-217ENST00000560070 LINC00846Q9NV44 126 aa4.43□□□□□ -1.7
USP3-217ENST00000560070 K7EQZ3 153 aa4.42□□□□□ -1.7
USP3-217ENST00000560070 MMP24-AS1A0A0U1RRL7 71 aa4.4□□□□□ -1.71
USP3-217ENST00000560070 NDUFS5O43920 106 aa4.4□□□□□ -1.71
USP3-217ENST00000560070 UBL5Q9BZL1 73 aa4.4□□□□□ -1.71
USP3-217ENST00000560070 M0R2T5 61 aa4.39□□□□□ -1.71
USP3-217ENST00000560070 MT1HP80294 61 aa4.39□□□□□ -1.71
USP3-217ENST00000560070 ZCCHC13Q8WW36 166 aaKnown RBP4.39□□□□□ -1.71
USP3-217ENST00000560070 hDV103S1A0JD37 113 aa4.38□□□□□ -1.71
USP3-217ENST00000560070 WFDC13Q8IUB5 93 aa4.38□□□□□ -1.71
USP3-217ENST00000560070 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
USP3-217ENST00000560070 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
USP3-217ENST00000560070 A0A1B0GV90 55 aa4.37□□□□□ -1.71
USP3-217ENST00000560070 TMEM254Q8TBM7 123 aa4.37□□□□□ -1.71
USP3-217ENST00000560070 FAM236DA0A1B0GTK5 79 aa4.36□□□□□ -1.71
USP3-217ENST00000560070 FAM236CP0DP71 79 aa4.36□□□□□ -1.71
USP3-217ENST00000560070 SPINK7P58062 85 aa4.36□□□□□ -1.71
USP3-217ENST00000560070 CASC2Q6XLA1 102 aa4.35□□□□□ -1.71
USP3-217ENST00000560070 HRES1P13985 223 aa4.34□□□□□ -1.71
USP3-217ENST00000560070 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
USP3-217ENST00000560070 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
USP3-217ENST00000560070 Q5W150 140 aa4.31□□□□□ -1.72
USP3-217ENST00000560070 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
USP3-217ENST00000560070 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
USP3-217ENST00000560070 IGKV2-30P06310 120 aa4.29□□□□□ -1.72
USP3-217ENST00000560070 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
USP3-217ENST00000560070 ACYP1P07311 99 aa4.28□□□□□ -1.72
USP3-217ENST00000560070 CXCL6P80162 114 aa4.28□□□□□ -1.72
USP3-217ENST00000560070 HIST1H4AP62805 103 aaKnown RBP4.25□□□□□ -1.73
USP3-217ENST00000560070 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
USP3-217ENST00000560070 C7orf65Q6ZTY9 151 aa4.22□□□□□ -1.73
USP3-217ENST00000560070 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.73
USP3-217ENST00000560070 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
USP3-217ENST00000560070 LINC00643Q86TS7 51 aa4.2□□□□□ -1.74
USP3-217ENST00000560070 A0A087WVE0 104 aa4.19□□□□□ -1.74
USP3-217ENST00000560070 ATP5EP2Q5VTU8 51 aa4.19□□□□□ -1.74
USP3-217ENST00000560070 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
USP3-217ENST00000560070 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
USP3-217ENST00000560070 J3QR89 54 aa4.17□□□□□ -1.74
USP3-217ENST00000560070 MT2AP02795 61 aa4.14□□□□□ -1.75
USP3-217ENST00000560070 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
USP3-217ENST00000560070 C1orf64Q8NEQ6 169 aa4.13□□□□□ -1.75
USP3-217ENST00000560070 TRAV22A0A0B4J277 110 aa4.12□□□□□ -1.75
USP3-217ENST00000560070 H0Y9P7 68 aa4.12□□□□□ -1.75
USP3-217ENST00000560070 UQCRQO14949 82 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms