RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 IGLV7-43P04211 117 aa6.19□□□□□ -1.42
TPM1-212ENST00000558347 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
TPM1-212ENST00000558347 IGFL1Q6UW32 110 aa6.19□□□□□ -1.42
TPM1-212ENST00000558347 UBE2AP49459 152 aa6.17□□□□□ -1.42
TPM1-212ENST00000558347 PRLHP81277 87 aa6.17□□□□□ -1.42
TPM1-212ENST00000558347 Q5XG85 94 aa6.17□□□□□ -1.42
TPM1-212ENST00000558347 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
TPM1-212ENST00000558347 HCG22E2RYF7 251 aa6.15□□□□□ -1.43
TPM1-212ENST00000558347 K7EQZ3 153 aa6.15□□□□□ -1.43
TPM1-212ENST00000558347 ZNF861PO60384 105 aa6.15□□□□□ -1.43
TPM1-212ENST00000558347 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.43
TPM1-212ENST00000558347 PRR26Q8N8Z3 221 aa6.13□□□□□ -1.43
TPM1-212ENST00000558347 KRTAP1-4P0C5Y4 121 aa6.12□□□□□ -1.43
TPM1-212ENST00000558347 ZCCHC13Q8WW36 166 aaKnown RBP6.12□□□□□ -1.43
TPM1-212ENST00000558347 LPAP08519 4548 aa6.11□□□□□ -1.43
TPM1-212ENST00000558347 A0A087WSZ3 146 aa6.1□□□□□ -1.43
TPM1-212ENST00000558347 C4orf26Q17RF5 130 aa6.1□□□□□ -1.43
TPM1-212ENST00000558347 ZNF706Q9Y5V0 76 aaPredicted RBP6.09□□□□□ -1.44
TPM1-212ENST00000558347 H3BPC8 53 aa6.07□□□□□ -1.44
TPM1-212ENST00000558347 NDUFB1O75438 58 aa6.07□□□□□ -1.44
TPM1-212ENST00000558347 LINC00483Q53H64 154 aa6.07□□□□□ -1.44
TPM1-212ENST00000558347 HRCT1Q6UXD1 115 aa6.07□□□□□ -1.44
TPM1-212ENST00000558347 A0A0G2JQZ4 141 aa6.06□□□□□ -1.44
TPM1-212ENST00000558347 A8MWP4 228 aa6.06□□□□□ -1.44
TPM1-212ENST00000558347 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
TPM1-212ENST00000558347 PRR15Q8IV56 129 aa6.06□□□□□ -1.44
TPM1-212ENST00000558347 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
TPM1-212ENST00000558347 MP68P56378 58 aa6.04□□□□□ -1.44
TPM1-212ENST00000558347 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
TPM1-212ENST00000558347 CASC2Q6XLA1 102 aa6.03□□□□□ -1.44
TPM1-212ENST00000558347 WFDC13Q8IUB5 93 aa6.03□□□□□ -1.44
TPM1-212ENST00000558347 A0A087X002 238 aa6.02□□□□□ -1.45
TPM1-212ENST00000558347 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
TPM1-212ENST00000558347 DEFB116Q30KQ4 102 aa6.02□□□□□ -1.45
TPM1-212ENST00000558347 TRAV22A0A0B4J277 110 aa6□□□□□ -1.45
TPM1-212ENST00000558347 FAM229BQ4G0N7 80 aa6□□□□□ -1.45
TPM1-212ENST00000558347 ANAPC11Q9NYG5 84 aa6□□□□□ -1.45
TPM1-212ENST00000558347 SPANXA2-OT1Q8N9U9 137 aa5.99□□□□□ -1.45
TPM1-212ENST00000558347 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
TPM1-212ENST00000558347 H0Y9P7 68 aa5.98□□□□□ -1.45
TPM1-212ENST00000558347 MOBPQ13875 183 aa5.98□□□□□ -1.45
TPM1-212ENST00000558347 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
TPM1-212ENST00000558347 C1orf64Q8NEQ6 169 aa5.97□□□□□ -1.45
TPM1-212ENST00000558347 MUC2Q02817 5179 aa5.96□□□□□ -1.46
TPM1-212ENST00000558347 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
TPM1-212ENST00000558347 TYMSOSQ8TAI1 123 aa5.96□□□□□ -1.46
TPM1-212ENST00000558347 TP53AIP1Q9HCN2 124 aa5.96□□□□□ -1.46
TPM1-212ENST00000558347 PRO0628Q9UI54 55 aa5.96□□□□□ -1.46
TPM1-212ENST00000558347 LINC00208Q96KT6 92 aa5.95□□□□□ -1.46
TPM1-212ENST00000558347 Q96NJ1 140 aa5.95□□□□□ -1.46
TPM1-212ENST00000558347 IGLV9-49A0A0B4J1Y8 123 aa5.94□□□□□ -1.46
TPM1-212ENST00000558347 PRR4Q16378 134 aa5.94□□□□□ -1.46
TPM1-212ENST00000558347 Q1T7F1 81 aa5.94□□□□□ -1.46
TPM1-212ENST00000558347 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
TPM1-212ENST00000558347 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
TPM1-212ENST00000558347 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
TPM1-212ENST00000558347 A0A1B0GVX0 72 aa5.91□□□□□ -1.46
TPM1-212ENST00000558347 V9GYY9 64 aa5.91□□□□□ -1.46
TPM1-212ENST00000558347 LINC00304Q8N9R0 145 aa5.9□□□□□ -1.46
TPM1-212ENST00000558347 KRTAP3-3Q9BYR6 98 aa5.89□□□□□ -1.47
TPM1-212ENST00000558347 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
TPM1-212ENST00000558347 CD164Q04900 197 aa5.89□□□□□ -1.47
TPM1-212ENST00000558347 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
TPM1-212ENST00000558347 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
TPM1-212ENST00000558347 IGLV7-46A0A075B6I9 117 aa5.87□□□□□ -1.47
TPM1-212ENST00000558347 C1orf195Q5TG92 126 aa5.86□□□□□ -1.47
TPM1-212ENST00000558347 MRPL34Q9BQ48 92 aaKnown RBP5.85□□□□□ -1.47
TPM1-212ENST00000558347 IGHV6-1A0A0B4J1U7 121 aa5.84□□□□□ -1.48
TPM1-212ENST00000558347 BRK1Q8WUW1 75 aa5.84□□□□□ -1.48
TPM1-212ENST00000558347 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
TPM1-212ENST00000558347 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
TPM1-212ENST00000558347 C8orf87E5RJ46 101 aa5.82□□□□□ -1.48
TPM1-212ENST00000558347 SPAG11AQ6PDA7 123 aa5.82□□□□□ -1.48
TPM1-212ENST00000558347 LIMD2Q9BT23 127 aa5.82□□□□□ -1.48
TPM1-212ENST00000558347 SPINK1P00995 79 aa5.81□□□□□ -1.48
TPM1-212ENST00000558347 RPS29P62273 56 aaKnown RBP5.81□□□□□ -1.48
TPM1-212ENST00000558347 C4orf48Q5BLP8 95 aa5.8□□□□□ -1.48
TPM1-212ENST00000558347 LOC101927531A0A1B0GV80 90 aa5.79□□□□□ -1.48
TPM1-212ENST00000558347 NDUFS5O43920 106 aa5.79□□□□□ -1.48
TPM1-212ENST00000558347 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
TPM1-212ENST00000558347 COA5Q86WW8 74 aa5.79□□□□□ -1.48
TPM1-212ENST00000558347 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
TPM1-212ENST00000558347 FAT4Q6V0I7 4981 aa5.76□□□□□ -1.49
TPM1-212ENST00000558347 PCOTHQ58A44 107 aa5.76□□□□□ -1.49
TPM1-212ENST00000558347 PSPHP1O15172 72 aa5.75□□□□□ -1.49
TPM1-212ENST00000558347 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
TPM1-212ENST00000558347 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
TPM1-212ENST00000558347 A8MUN3 132 aa5.74□□□□□ -1.49
TPM1-212ENST00000558347 Q5VV11 94 aa5.74□□□□□ -1.49
TPM1-212ENST00000558347 Q75L30 129 aa5.71□□□□□ -1.5
TPM1-212ENST00000558347 LINC00313P59037 77 aa5.7□□□□□ -1.5
TPM1-212ENST00000558347 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
TPM1-212ENST00000558347 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
TPM1-212ENST00000558347 HRES1P13985 223 aa5.69□□□□□ -1.5
TPM1-212ENST00000558347 Q5W150 140 aa5.69□□□□□ -1.5
TPM1-212ENST00000558347 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
TPM1-212ENST00000558347 ACYP2P14621 99 aa5.65□□□□□ -1.5
TPM1-212ENST00000558347 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
TPM1-212ENST00000558347 IGKV2-30P06310 120 aa5.64□□□□□ -1.51
TPM1-212ENST00000558347 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms