RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 FAM236BA0A1B0GV22 79 aa4.33□□□□□ -1.72
SPG11-204ENST00000557866 BPY2O14599 106 aa4.33□□□□□ -1.72
SPG11-204ENST00000557866 KRTAP13-2Q52LG2 175 aa4.33□□□□□ -1.72
SPG11-204ENST00000557866 Q8N9L7 120 aa4.33□□□□□ -1.72
SPG11-204ENST00000557866 IGKV4-1P06312 121 aa4.32□□□□□ -1.72
SPG11-204ENST00000557866 DSCR10P59022 87 aa4.32□□□□□ -1.72
SPG11-204ENST00000557866 HRCT1Q6UXD1 115 aa4.32□□□□□ -1.72
SPG11-204ENST00000557866 LINC00472Q9H8W2 130 aa4.32□□□□□ -1.72
SPG11-204ENST00000557866 DEFB116Q30KQ4 102 aa4.31□□□□□ -1.72
SPG11-204ENST00000557866 FAM229BQ4G0N7 80 aa4.31□□□□□ -1.72
SPG11-204ENST00000557866 RYR1P21817 5038 aa4.31□□□□□ -1.72
SPG11-204ENST00000557866 SPINK6Q6UWN8 80 aa4.3□□□□□ -1.72
SPG11-204ENST00000557866 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
SPG11-204ENST00000557866 Q96NJ1 140 aa4.3□□□□□ -1.72
SPG11-204ENST00000557866 ANAPC13Q9BS18 74 aa4.28□□□□□ -1.72
SPG11-204ENST00000557866 K7EQZ3 153 aa4.27□□□□□ -1.73
SPG11-204ENST00000557866 CD164Q04900 197 aa4.27□□□□□ -1.73
SPG11-204ENST00000557866 ATOX1O00244 68 aa4.26□□□□□ -1.73
SPG11-204ENST00000557866 CDK2AP2O75956 126 aa4.25□□□□□ -1.73
SPG11-204ENST00000557866 PRR26Q8N8Z3 221 aa4.25□□□□□ -1.73
SPG11-204ENST00000557866 EPPK1P58107 5090 aaKnown RBP4.25□□□□□ -1.73
SPG11-204ENST00000557866 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
SPG11-204ENST00000557866 A8MWP4 228 aa4.24□□□□□ -1.73
SPG11-204ENST00000557866 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
SPG11-204ENST00000557866 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
SPG11-204ENST00000557866 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
SPG11-204ENST00000557866 SS18L2Q9UHA2 77 aa4.24□□□□□ -1.73
SPG11-204ENST00000557866 TNXBP22105 4242 aa4.24□□□□□ -1.73
SPG11-204ENST00000557866 J3KT08 172 aa4.23□□□□□ -1.73
SPG11-204ENST00000557866 ASB16-AS1Q495Z4 193 aa4.23□□□□□ -1.73
SPG11-204ENST00000557866 Q5XG85 94 aa4.22□□□□□ -1.73
SPG11-204ENST00000557866 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
SPG11-204ENST00000557866 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
SPG11-204ENST00000557866 KIAA1109Q2LD37 5005 aa4.21□□□□□ -1.74
SPG11-204ENST00000557866 HCG22E2RYF7 251 aa4.21□□□□□ -1.74
SPG11-204ENST00000557866 COX7CP15954 63 aa4.21□□□□□ -1.74
SPG11-204ENST00000557866 Q5VSD8 79 aa4.21□□□□□ -1.74
SPG11-204ENST00000557866 SERP2Q8N6R1 65 aa4.21□□□□□ -1.74
SPG11-204ENST00000557866 LRP1Q07954 4544 aaKnown RBP4.21□□□□□ -1.74
SPG11-204ENST00000557866 TRAV7A0A075B6U4 112 aa4.2□□□□□ -1.74
SPG11-204ENST00000557866 MMP24-AS1A0A0U1RRL7 71 aa4.2□□□□□ -1.74
SPG11-204ENST00000557866 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
SPG11-204ENST00000557866 C1orf195Q5TG92 126 aa4.2□□□□□ -1.74
SPG11-204ENST00000557866 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
SPG11-204ENST00000557866 OCR1Q9BZK8 76 aa4.2□□□□□ -1.74
SPG11-204ENST00000557866 A0A1B0GVX0 72 aa4.19□□□□□ -1.74
SPG11-204ENST00000557866 UQCRQO14949 82 aa4.19□□□□□ -1.74
SPG11-204ENST00000557866 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
SPG11-204ENST00000557866 WFDC13Q8IUB5 93 aa4.19□□□□□ -1.74
SPG11-204ENST00000557866 LINC00304Q8N9R0 145 aa4.19□□□□□ -1.74
SPG11-204ENST00000557866 NDUFB1O75438 58 aa4.18□□□□□ -1.74
SPG11-204ENST00000557866 SPINK1P00995 79 aa4.18□□□□□ -1.74
SPG11-204ENST00000557866 C8orf17Q9NRJ1 99 aa4.18□□□□□ -1.74
SPG11-204ENST00000557866 IGHV6-1A0A0B4J1U7 121 aa4.17□□□□□ -1.74
SPG11-204ENST00000557866 CASC2Q6XLA1 102 aa4.17□□□□□ -1.74
SPG11-204ENST00000557866 SMIM20Q8N5G0 67 aa4.17□□□□□ -1.74
SPG11-204ENST00000557866 LIMD2Q9BT23 127 aa4.17□□□□□ -1.74
SPG11-204ENST00000557866 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
SPG11-204ENST00000557866 CYSTM1Q9H1C7 97 aa4.17□□□□□ -1.74
SPG11-204ENST00000557866 KRTAP10-8P60410 259 aa4.16□□□□□ -1.74
SPG11-204ENST00000557866 RPS29P62273 56 aaKnown RBP4.16□□□□□ -1.74
SPG11-204ENST00000557866 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
SPG11-204ENST00000557866 hDV103S1A0JD37 113 aa4.15□□□□□ -1.75
SPG11-204ENST00000557866 C20orf197Q8N268 126 aa4.14□□□□□ -1.75
SPG11-204ENST00000557866 MYCBP2O75592 4640 aa4.12□□□□□ -1.75
SPG11-204ENST00000557866 C8orf87E5RJ46 101 aa4.12□□□□□ -1.75
SPG11-204ENST00000557866 TMEM254Q8TBM7 123 aa4.12□□□□□ -1.75
SPG11-204ENST00000557866 MRPL34Q9BQ48 92 aaKnown RBP4.12□□□□□ -1.75
SPG11-204ENST00000557866 SNURFQ9Y675 71 aa4.12□□□□□ -1.75
SPG11-204ENST00000557866 A0A0U1RQV1 116 aa4.11□□□□□ -1.75
SPG11-204ENST00000557866 KRTAP16-1A8MUX0 517 aa4.11□□□□□ -1.75
SPG11-204ENST00000557866 MT1HL1P0DM35 61 aa4.11□□□□□ -1.75
SPG11-204ENST00000557866 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
SPG11-204ENST00000557866 LINC00313P59037 77 aa4.1□□□□□ -1.75
SPG11-204ENST00000557866 KLKP1Q107X0 134 aa4.1□□□□□ -1.75
SPG11-204ENST00000557866 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
SPG11-204ENST00000557866 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
SPG11-204ENST00000557866 FLG2Q5D862 2391 aaPredicted RBP4.09□□□□□ -1.76
SPG11-204ENST00000557866 H7BZZ5 65 aa4.08□□□□□ -1.76
SPG11-204ENST00000557866 C5orf47Q569G3 176 aa4.08□□□□□ -1.76
SPG11-204ENST00000557866 HERC2O95714 4834 aa4.08□□□□□ -1.76
SPG11-204ENST00000557866 H0Y9P7 68 aa4.07□□□□□ -1.76
SPG11-204ENST00000557866 Q5W150 140 aa4.07□□□□□ -1.76
SPG11-204ENST00000557866 RETNLBQ9BQ08 111 aa4.07□□□□□ -1.76
SPG11-204ENST00000557866 NDUFS5O43920 106 aa4.06□□□□□ -1.76
SPG11-204ENST00000557866 KRTAP13-3Q3SY46 172 aa4.06□□□□□ -1.76
SPG11-204ENST00000557866 TP53AIP1Q9HCN2 124 aa4.06□□□□□ -1.76
SPG11-204ENST00000557866 LINC00208Q96KT6 92 aa4.05□□□□□ -1.76
SPG11-204ENST00000557866 TRAV22A0A0B4J277 110 aa4.04□□□□□ -1.76
SPG11-204ENST00000557866 MP68P56378 58 aa4.04□□□□□ -1.76
SPG11-204ENST00000557866 H3BPC8 53 aa4.03□□□□□ -1.76
SPG11-204ENST00000557866 NDUFC1O43677 76 aa4.03□□□□□ -1.76
SPG11-204ENST00000557866 OXTP01178 125 aa4.03□□□□□ -1.76
SPG11-204ENST00000557866 TMEM258P61165 79 aa4.03□□□□□ -1.76
SPG11-204ENST00000557866 C1orf64Q8NEQ6 169 aa4.03□□□□□ -1.76
SPG11-204ENST00000557866 ABCA13Q86UQ4 5058 aa4.03□□□□□ -1.76
SPG11-204ENST00000557866 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
SPG11-204ENST00000557866 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
SPG11-204ENST00000557866 A8MUU9 505 aa4□□□□□ -1.77
SPG11-204ENST00000557866 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms