RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CRYGAP11844 174 aa2.72□□□□□ -1.97
SRP54-212ENST00000556992 Q6ZVQ6 151 aa2.72□□□□□ -1.97
SRP54-212ENST00000556992 KRTAP13-1Q8IUC0 172 aa2.72□□□□□ -1.97
SRP54-212ENST00000556992 PKD1P98161 4303 aa2.72□□□□□ -1.97
SRP54-212ENST00000556992 APOBP04114 4563 aaKnown RBP2.71□□□□□ -1.97
SRP54-212ENST00000556992 DNAH6Q9C0G6 4158 aa2.71□□□□□ -1.98
SRP54-212ENST00000556992 A0A1W2PNM2 257 aa2.71□□□□□ -1.98
SRP54-212ENST00000556992 ZNF861PO60384 105 aa2.71□□□□□ -1.98
SRP54-212ENST00000556992 HIST1H4AP62805 103 aaKnown RBP2.71□□□□□ -1.98
SRP54-212ENST00000556992 C3orf22Q8N5N4 141 aa2.71□□□□□ -1.98
SRP54-212ENST00000556992 Q8NBF4 154 aa2.71□□□□□ -1.98
SRP54-212ENST00000556992 SPRR4Q96PI1 79 aa2.71□□□□□ -1.98
SRP54-212ENST00000556992 PSORS1C2Q9UIG4 136 aa2.71□□□□□ -1.98
SRP54-212ENST00000556992 BPY2O14599 106 aa2.7□□□□□ -1.98
SRP54-212ENST00000556992 RPL37AP61513 92 aaKnown RBP2.7□□□□□ -1.98
SRP54-212ENST00000556992 LINC00336Q6ZUF6 198 aa2.7□□□□□ -1.98
SRP54-212ENST00000556992 LRP1BQ9NZR2 4599 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 FAM236AA0A1B0GUQ0 79 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 FAM236BA0A1B0GV22 79 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 ATOX1O00244 68 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 IGLV7-43P04211 117 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 LINC00483Q53H64 154 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 SMIM20Q8N5G0 67 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 MYCBP2O75592 4640 aa2.69□□□□□ -1.98
SRP54-212ENST00000556992 Q6ZSA8 131 aa2.68□□□□□ -1.98
SRP54-212ENST00000556992 DNAH5Q8TE73 4624 aa2.68□□□□□ -1.98
SRP54-212ENST00000556992 A0A087WVE0 104 aa2.67□□□□□ -1.98
SRP54-212ENST00000556992 KRTAP10-1P60331 282 aa2.67□□□□□ -1.98
SRP54-212ENST00000556992 SERP2Q8N6R1 65 aa2.67□□□□□ -1.98
SRP54-212ENST00000556992 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
SRP54-212ENST00000556992 J3KT08 172 aa2.66□□□□□ -1.98
SRP54-212ENST00000556992 UQCRQO14949 82 aa2.66□□□□□ -1.98
SRP54-212ENST00000556992 COX7CP15954 63 aa2.66□□□□□ -1.98
SRP54-212ENST00000556992 SCXQ7RTU7 201 aa2.66□□□□□ -1.98
SRP54-212ENST00000556992 SSBP3-AS1Q7Z2R9 100 aa2.66□□□□□ -1.98
SRP54-212ENST00000556992 FAT1Q14517 4588 aa2.65□□□□□ -1.98
SRP54-212ENST00000556992 A0A087WSZ3 146 aa2.65□□□□□ -1.99
SRP54-212ENST00000556992 IGLV9-49A0A0B4J1Y8 123 aa2.65□□□□□ -1.99
SRP54-212ENST00000556992 A0A0G2JQZ4 141 aa2.65□□□□□ -1.99
SRP54-212ENST00000556992 C9orf153Q5TBE3 101 aa2.65□□□□□ -1.99
SRP54-212ENST00000556992 SS18L2Q9UHA2 77 aa2.65□□□□□ -1.99
SRP54-212ENST00000556992 TRAV7A0A075B6U4 112 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 A0A087X002 238 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 CCDC179H3BU77 68 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 NDUFB1O75438 58 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 IGKV4-1P06312 121 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 CD164Q04900 197 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 FAM229BQ4G0N7 80 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
SRP54-212ENST00000556992 LINC00472Q9H8W2 130 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 RNF213Q63HN8 5207 aa2.64□□□□□ -1.99
SRP54-212ENST00000556992 SEC61BP60468 96 aaKnown RBP2.63□□□□□ -1.99
SRP54-212ENST00000556992 MOBPQ13875 183 aa2.63□□□□□ -1.99
SRP54-212ENST00000556992 Q8N9L7 120 aa2.63□□□□□ -1.99
SRP54-212ENST00000556992 ANAPC11Q9NYG5 84 aa2.63□□□□□ -1.99
SRP54-212ENST00000556992 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
SRP54-212ENST00000556992 A8MWP4 228 aa2.62□□□□□ -1.99
SRP54-212ENST00000556992 CDK2AP2O75956 126 aa2.62□□□□□ -1.99
SRP54-212ENST00000556992 SPINK6Q6UWN8 80 aa2.62□□□□□ -1.99
SRP54-212ENST00000556992 PRR15Q8IV56 129 aa2.62□□□□□ -1.99
SRP54-212ENST00000556992 DMBT1Q9UGM3 2413 aaPredicted RBP2.61□□□□□ -1.99
SRP54-212ENST00000556992 VPS13BQ7Z7G8 4022 aa2.61□□□□□ -1.99
SRP54-212ENST00000556992 HCG22E2RYF7 251 aa2.61□□□□□ -1.99
SRP54-212ENST00000556992 K7EQZ3 153 aa2.61□□□□□ -1.99
SRP54-212ENST00000556992 DEFB116Q30KQ4 102 aa2.61□□□□□ -1.99
SRP54-212ENST00000556992 ASB16-AS1Q495Z4 193 aa2.6□□□□□ -1.99
SRP54-212ENST00000556992 C5orf47Q569G3 176 aa2.6□□□□□ -1.99
SRP54-212ENST00000556992 HRCT1Q6UXD1 115 aa2.6□□□□□ -1.99
SRP54-212ENST00000556992 OCR1Q9BZK8 76 aa2.6□□□□□ -1.99
SRP54-212ENST00000556992 NDUFC1O43677 76 aa2.59□□□□□ -1.99
SRP54-212ENST00000556992 Q5XG85 94 aa2.59□□□□□ -1.99
SRP54-212ENST00000556992 CASC2Q6XLA1 102 aa2.59□□□□□ -1.99
SRP54-212ENST00000556992 C20orf197Q8N268 126 aa2.59□□□□□ -1.99
SRP54-212ENST00000556992 KLKP1Q107X0 134 aa2.58□□□□□ -2
SRP54-212ENST00000556992 A0A1B0GVX0 72 aa2.57□□□□□ -2
SRP54-212ENST00000556992 SPINK1P00995 79 aa2.57□□□□□ -2
SRP54-212ENST00000556992 SMR3BP02814 79 aaPredicted RBP2.57□□□□□ -2
SRP54-212ENST00000556992 KRTAP1-4P0C5Y4 121 aa2.57□□□□□ -2
SRP54-212ENST00000556992 MP68P56378 58 aa2.57□□□□□ -2
SRP54-212ENST00000556992 TMEM258P61165 79 aa2.57□□□□□ -2
SRP54-212ENST00000556992 KRTAP13-2Q52LG2 175 aa2.57□□□□□ -2
SRP54-212ENST00000556992 SPAG11AQ6PDA7 123 aa2.57□□□□□ -2
SRP54-212ENST00000556992 WFDC13Q8IUB5 93 aa2.57□□□□□ -2
SRP54-212ENST00000556992 TYMSOSQ8TAI1 123 aa2.57□□□□□ -2
SRP54-212ENST00000556992 TMEM254Q8TBM7 123 aa2.57□□□□□ -2
SRP54-212ENST00000556992 Q96NJ1 140 aa2.57□□□□□ -2
SRP54-212ENST00000556992 LIMD2Q9BT23 127 aa2.57□□□□□ -2
SRP54-212ENST00000556992 TP53AIP1Q9HCN2 124 aa2.57□□□□□ -2
SRP54-212ENST00000556992 IGHV6-1A0A0B4J1U7 121 aa2.56□□□□□ -2
SRP54-212ENST00000556992 hDV103S1A0JD37 113 aa2.56□□□□□ -2
SRP54-212ENST00000556992 C8orf17Q9NRJ1 99 aa2.56□□□□□ -2
SRP54-212ENST00000556992 A0A0U1RQV1 116 aa2.55□□□□□ -2
SRP54-212ENST00000556992 MMP24-AS1A0A0U1RRL7 71 aa2.55□□□□□ -2
SRP54-212ENST00000556992 C8orf87E5RJ46 101 aa2.55□□□□□ -2
SRP54-212ENST00000556992 H3BPC8 53 aa2.55□□□□□ -2
SRP54-212ENST00000556992 RPS29P62273 56 aaKnown RBP2.55□□□□□ -2
SRP54-212ENST00000556992 RPS28P62857 69 aaKnown RBP2.55□□□□□ -2
SRP54-212ENST00000556992 SNURFQ9Y675 71 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 277.1 ms