RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 C9JAW5 83 aa6.01□□□□□ -1.45
ACTN1-221ENST00000556571 LCE2BO14633 110 aa6.01□□□□□ -1.45
ACTN1-221ENST00000556571 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
ACTN1-221ENST00000556571 SIGMAR1Q99720 223 aa6.01□□□□□ -1.45
ACTN1-221ENST00000556571 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
ACTN1-221ENST00000556571 A8MUU9 505 aa5.99□□□□□ -1.45
ACTN1-221ENST00000556571 JMJD7-PLA2G4BH0Y9G9 81 aa5.99□□□□□ -1.45
ACTN1-221ENST00000556571 C21orf62-AS1Q17RA5 79 aa5.99□□□□□ -1.45
ACTN1-221ENST00000556571 C9orf118A6NHY6 69 aa5.98□□□□□ -1.45
ACTN1-221ENST00000556571 MT1FP04733 61 aa5.98□□□□□ -1.45
ACTN1-221ENST00000556571 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
ACTN1-221ENST00000556571 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
ACTN1-221ENST00000556571 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
ACTN1-221ENST00000556571 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
ACTN1-221ENST00000556571 A0A1W2PPM0 123 aa5.95□□□□□ -1.46
ACTN1-221ENST00000556571 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
ACTN1-221ENST00000556571 PDE6GP18545 87 aa5.95□□□□□ -1.46
ACTN1-221ENST00000556571 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
ACTN1-221ENST00000556571 TAX1BP3O14907 124 aa5.94□□□□□ -1.46
ACTN1-221ENST00000556571 DEFB116Q30KQ4 102 aa5.94□□□□□ -1.46
ACTN1-221ENST00000556571 LOC110117498A0A087WWA1 95 aa5.93□□□□□ -1.46
ACTN1-221ENST00000556571 LINC00472Q9H8W2 130 aa5.93□□□□□ -1.46
ACTN1-221ENST00000556571 A0A1B0GW54 56 aa5.92□□□□□ -1.46
ACTN1-221ENST00000556571 DSCR10P59022 87 aa5.92□□□□□ -1.46
ACTN1-221ENST00000556571 LINC00313P59037 77 aa5.92□□□□□ -1.46
ACTN1-221ENST00000556571 Q6ZQT0 140 aa5.92□□□□□ -1.46
ACTN1-221ENST00000556571 C14orf132Q9NPU4 83 aa5.92□□□□□ -1.46
ACTN1-221ENST00000556571 IGHV6-1A0A0B4J1U7 121 aa5.91□□□□□ -1.46
ACTN1-221ENST00000556571 H3BT86 120 aa5.91□□□□□ -1.46
ACTN1-221ENST00000556571 J3KT08 172 aa5.91□□□□□ -1.46
ACTN1-221ENST00000556571 COL5A1-AS1Q5SY13 56 aa5.91□□□□□ -1.46
ACTN1-221ENST00000556571 RBM12B-AS1Q9P1G2 102 aa5.9□□□□□ -1.46
ACTN1-221ENST00000556571 SPCS1Q9Y6A9 102 aa5.9□□□□□ -1.46
ACTN1-221ENST00000556571 MTURNQ8N3F0 131 aa5.89□□□□□ -1.47
ACTN1-221ENST00000556571 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
ACTN1-221ENST00000556571 NDUFB1O75438 58 aa5.88□□□□□ -1.47
ACTN1-221ENST00000556571 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
ACTN1-221ENST00000556571 MPLKIPQ8TAP9 179 aa5.88□□□□□ -1.47
ACTN1-221ENST00000556571 A0A1B0GVX0 72 aa5.86□□□□□ -1.47
ACTN1-221ENST00000556571 C8orf87E5RJ46 101 aa5.86□□□□□ -1.47
ACTN1-221ENST00000556571 HRES1P13985 223 aa5.86□□□□□ -1.47
ACTN1-221ENST00000556571 PCP4L1A6NKN8 68 aa5.85□□□□□ -1.47
ACTN1-221ENST00000556571 NREPQ16612 68 aa5.85□□□□□ -1.47
ACTN1-221ENST00000556571 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
ACTN1-221ENST00000556571 A8MWP4 228 aa5.82□□□□□ -1.48
ACTN1-221ENST00000556571 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
ACTN1-221ENST00000556571 K7EP34 96 aa5.8□□□□□ -1.48
ACTN1-221ENST00000556571 GTF2H5Q6ZYL4 71 aa5.8□□□□□ -1.48
ACTN1-221ENST00000556571 IGKV3D-7A0A0C4DH55 119 aa5.77□□□□□ -1.49
ACTN1-221ENST00000556571 SMCPP49901 116 aaPredicted RBP5.76□□□□□ -1.49
ACTN1-221ENST00000556571 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
ACTN1-221ENST00000556571 BPY2O14599 106 aa5.75□□□□□ -1.49
ACTN1-221ENST00000556571 PRR15Q8IV56 129 aa5.75□□□□□ -1.49
ACTN1-221ENST00000556571 Q6ZVQ6 151 aa5.73□□□□□ -1.49
ACTN1-221ENST00000556571 PRO0461Q9UI25 63 aa5.73□□□□□ -1.49
ACTN1-221ENST00000556571 F8W1H4 67 aa5.72□□□□□ -1.49
ACTN1-221ENST00000556571 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
ACTN1-221ENST00000556571 ZCCHC13Q8WW36 166 aaKnown RBP5.72□□□□□ -1.49
ACTN1-221ENST00000556571 UBL5Q9BZL1 73 aa5.72□□□□□ -1.49
ACTN1-221ENST00000556571 K7EQZ3 153 aa5.71□□□□□ -1.5
ACTN1-221ENST00000556571 NEBP20929 6669 aa5.71□□□□□ -1.5
ACTN1-221ENST00000556571 hDV103S1A0JD37 113 aa5.69□□□□□ -1.5
ACTN1-221ENST00000556571 NDUFS5O43920 106 aa5.69□□□□□ -1.5
ACTN1-221ENST00000556571 SPINK7P58062 85 aa5.69□□□□□ -1.5
ACTN1-221ENST00000556571 TMEM254Q8TBM7 123 aa5.69□□□□□ -1.5
ACTN1-221ENST00000556571 MRPL34Q9BQ48 92 aaKnown RBP5.69□□□□□ -1.5
ACTN1-221ENST00000556571 MMP24-AS1A0A0U1RRL7 71 aa5.68□□□□□ -1.5
ACTN1-221ENST00000556571 ETDBQ3ZM63 59 aa5.66□□□□□ -1.5
ACTN1-221ENST00000556571 Q8N9L7 120 aa5.65□□□□□ -1.5
ACTN1-221ENST00000556571 CASC2Q6XLA1 102 aa5.64□□□□□ -1.51
ACTN1-221ENST00000556571 WFDC13Q8IUB5 93 aa5.63□□□□□ -1.51
ACTN1-221ENST00000556571 MUC12Q9UKN1 5478 aa5.62□□□□□ -1.51
ACTN1-221ENST00000556571 HCG22E2RYF7 251 aa5.58□□□□□ -1.52
ACTN1-221ENST00000556571 CXCL6P80162 114 aa5.57□□□□□ -1.52
ACTN1-221ENST00000556571 ACYP1P07311 99 aa5.56□□□□□ -1.52
ACTN1-221ENST00000556571 IGKV2D-30A0A075B6S6 120 aa5.55□□□□□ -1.52
ACTN1-221ENST00000556571 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
ACTN1-221ENST00000556571 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
ACTN1-221ENST00000556571 C7orf65Q6ZTY9 151 aa5.53□□□□□ -1.52
ACTN1-221ENST00000556571 FAM240AA0A1B0GVK7 77 aa5.52□□□□□ -1.53
ACTN1-221ENST00000556571 H1FX-AS1Q4G0G2 97 aa5.52□□□□□ -1.53
ACTN1-221ENST00000556571 Q5W150 140 aa5.52□□□□□ -1.53
ACTN1-221ENST00000556571 A0A1B0GV90 55 aa5.5□□□□□ -1.53
ACTN1-221ENST00000556571 A6NN06 94 aa5.49□□□□□ -1.53
ACTN1-221ENST00000556571 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
ACTN1-221ENST00000556571 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
ACTN1-221ENST00000556571 HIST1H4AP62805 103 aaKnown RBP5.46□□□□□ -1.54
ACTN1-221ENST00000556571 MDN1Q9NU22 5596 aa5.44□□□□□ -1.54
ACTN1-221ENST00000556571 KMT2DO14686 5537 aa5.43□□□□□ -1.54
ACTN1-221ENST00000556571 J3QR89 54 aa5.42□□□□□ -1.54
ACTN1-221ENST00000556571 C4orf26Q17RF5 130 aa5.42□□□□□ -1.54
ACTN1-221ENST00000556571 LINC00643Q86TS7 51 aa5.42□□□□□ -1.54
ACTN1-221ENST00000556571 MT1BP07438 61 aa5.4□□□□□ -1.54
ACTN1-221ENST00000556571 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
ACTN1-221ENST00000556571 Q5VV11 94 aa5.4□□□□□ -1.54
ACTN1-221ENST00000556571 TRAV22A0A0B4J277 110 aa5.38□□□□□ -1.55
ACTN1-221ENST00000556571 FAM236AA0A1B0GUQ0 79 aa5.36□□□□□ -1.55
ACTN1-221ENST00000556571 FAM236BA0A1B0GV22 79 aa5.36□□□□□ -1.55
ACTN1-221ENST00000556571 KRTAP10-5P60370 271 aa5.36□□□□□ -1.55
ACTN1-221ENST00000556571 UQCRQO14949 82 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms