RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
VTI1B-206ENST00000556461 M0R2T5 61 aa4.15□□□□□ -1.75
VTI1B-206ENST00000556461 Q6ZQT0 140 aa4.15□□□□□ -1.75
VTI1B-206ENST00000556461 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
VTI1B-206ENST00000556461 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
VTI1B-206ENST00000556461 TSTD3H0UI37 97 aa4.14□□□□□ -1.75
VTI1B-206ENST00000556461 LOC110117498A0A087WWA1 95 aa4.13□□□□□ -1.75
VTI1B-206ENST00000556461 TAX1BP3O14907 124 aa4.13□□□□□ -1.75
VTI1B-206ENST00000556461 JMJD7-PLA2G4BH0Y9G9 81 aa4.12□□□□□ -1.75
VTI1B-206ENST00000556461 C14orf132Q9NPU4 83 aa4.12□□□□□ -1.75
VTI1B-206ENST00000556461 C9orf118A6NHY6 69 aa4.11□□□□□ -1.75
VTI1B-206ENST00000556461 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
VTI1B-206ENST00000556461 MTURNQ8N3F0 131 aa4.11□□□□□ -1.75
VTI1B-206ENST00000556461 TRBV20-1A0A075B6N2 111 aa4.1□□□□□ -1.75
VTI1B-206ENST00000556461 J3KT08 172 aa4.1□□□□□ -1.75
VTI1B-206ENST00000556461 HRES1P13985 223 aa4.1□□□□□ -1.75
VTI1B-206ENST00000556461 LYRM7Q5U5X0 104 aa4.1□□□□□ -1.75
VTI1B-206ENST00000556461 IGKV3D-7A0A0C4DH55 119 aa4.09□□□□□ -1.75
VTI1B-206ENST00000556461 A0A1W2PPM0 123 aa4.09□□□□□ -1.75
VTI1B-206ENST00000556461 C21orf62-AS1Q17RA5 79 aa4.08□□□□□ -1.76
VTI1B-206ENST00000556461 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
VTI1B-206ENST00000556461 A8MWP4 228 aa4.07□□□□□ -1.76
VTI1B-206ENST00000556461 PDE6GP18545 87 aa4.07□□□□□ -1.76
VTI1B-206ENST00000556461 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
VTI1B-206ENST00000556461 C8orf17Q9NRJ1 99 aa4.07□□□□□ -1.76
VTI1B-206ENST00000556461 A0A1B0GW54 56 aa4.06□□□□□ -1.76
VTI1B-206ENST00000556461 NDUFB1O75438 58 aa4.06□□□□□ -1.76
VTI1B-206ENST00000556461 Q8N9P0 234 aaPredicted RBP4.06□□□□□ -1.76
VTI1B-206ENST00000556461 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
VTI1B-206ENST00000556461 H3BT86 120 aa4.05□□□□□ -1.76
VTI1B-206ENST00000556461 NREPQ16612 68 aa4.05□□□□□ -1.76
VTI1B-206ENST00000556461 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
VTI1B-206ENST00000556461 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
VTI1B-206ENST00000556461 FAM236DA0A1B0GTK5 79 aa4.04□□□□□ -1.76
VTI1B-206ENST00000556461 FAM236CP0DP71 79 aa4.04□□□□□ -1.76
VTI1B-206ENST00000556461 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
VTI1B-206ENST00000556461 SPINK7P58062 85 aa4.03□□□□□ -1.76
VTI1B-206ENST00000556461 Q6ZVQ6 151 aa4.03□□□□□ -1.76
VTI1B-206ENST00000556461 SPCS1Q9Y6A9 102 aa4.03□□□□□ -1.76
VTI1B-206ENST00000556461 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
VTI1B-206ENST00000556461 USH2AO75445 5202 aa4.01□□□□□ -1.77
VTI1B-206ENST00000556461 K7EQZ3 153 aa4.01□□□□□ -1.77
VTI1B-206ENST00000556461 MT2AP02795 61 aa4□□□□□ -1.77
VTI1B-206ENST00000556461 PRO0461Q9UI25 63 aa4□□□□□ -1.77
VTI1B-206ENST00000556461 COL5A1-AS1Q5SY13 56 aa3.99□□□□□ -1.77
VTI1B-206ENST00000556461 TMEM254Q8TBM7 123 aa3.99□□□□□ -1.77
VTI1B-206ENST00000556461 MRPL34Q9BQ48 92 aaKnown RBP3.99□□□□□ -1.77
VTI1B-206ENST00000556461 hDV103S1A0JD37 113 aa3.98□□□□□ -1.77
VTI1B-206ENST00000556461 BPY2O14599 106 aa3.98□□□□□ -1.77
VTI1B-206ENST00000556461 Q8N9L7 120 aa3.98□□□□□ -1.77
VTI1B-206ENST00000556461 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
VTI1B-206ENST00000556461 K7EP34 96 aa3.97□□□□□ -1.77
VTI1B-206ENST00000556461 MT1FP04733 61 aa3.97□□□□□ -1.77
VTI1B-206ENST00000556461 WFDC13Q8IUB5 93 aa3.97□□□□□ -1.77
VTI1B-206ENST00000556461 NDUFS5O43920 106 aa3.95□□□□□ -1.78
VTI1B-206ENST00000556461 Q5W150 140 aa3.95□□□□□ -1.78
VTI1B-206ENST00000556461 LINC00846Q9NV44 126 aa3.95□□□□□ -1.78
VTI1B-206ENST00000556461 PCP4L1A6NKN8 68 aa3.93□□□□□ -1.78
VTI1B-206ENST00000556461 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
VTI1B-206ENST00000556461 CASC2Q6XLA1 102 aa3.92□□□□□ -1.78
VTI1B-206ENST00000556461 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
VTI1B-206ENST00000556461 HCG22E2RYF7 251 aa3.91□□□□□ -1.78
VTI1B-206ENST00000556461 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
VTI1B-206ENST00000556461 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
VTI1B-206ENST00000556461 UBL5Q9BZL1 73 aa3.89□□□□□ -1.79
VTI1B-206ENST00000556461 ETDBQ3ZM63 59 aa3.88□□□□□ -1.79
VTI1B-206ENST00000556461 GTF2H5Q6ZYL4 71 aa3.88□□□□□ -1.79
VTI1B-206ENST00000556461 H1FX-AS1Q4G0G2 97 aa3.87□□□□□ -1.79
VTI1B-206ENST00000556461 C7orf65Q6ZTY9 151 aa3.87□□□□□ -1.79
VTI1B-206ENST00000556461 F8W1H4 67 aa3.86□□□□□ -1.79
VTI1B-206ENST00000556461 H3BS24 57 aa3.86□□□□□ -1.79
VTI1B-206ENST00000556461 CXCL6P80162 114 aa3.86□□□□□ -1.79
VTI1B-206ENST00000556461 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
VTI1B-206ENST00000556461 C4orf26Q17RF5 130 aa3.85□□□□□ -1.79
VTI1B-206ENST00000556461 KRTAP19-1Q8IUB9 90 aa3.83□□□□□ -1.8
VTI1B-206ENST00000556461 KRTAP3-1Q9BYR8 98 aa3.83□□□□□ -1.8
VTI1B-206ENST00000556461 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
VTI1B-206ENST00000556461 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
VTI1B-206ENST00000556461 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
VTI1B-206ENST00000556461 C1orf64Q8NEQ6 169 aa3.77□□□□□ -1.81
VTI1B-206ENST00000556461 TP53AIP1Q9HCN2 124 aa3.77□□□□□ -1.81
VTI1B-206ENST00000556461 C5orf47Q569G3 176 aa3.76□□□□□ -1.81
VTI1B-206ENST00000556461 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
VTI1B-206ENST00000556461 FAM240AA0A1B0GVK7 77 aa3.74□□□□□ -1.81
VTI1B-206ENST00000556461 ACYP1P07311 99 aa3.74□□□□□ -1.81
VTI1B-206ENST00000556461 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
VTI1B-206ENST00000556461 CYP4F30PQ9H0H9 118 aa3.74□□□□□ -1.81
VTI1B-206ENST00000556461 S4R3F8 94 aa3.74□□□□□ -1.81
VTI1B-206ENST00000556461 A0A1B0GV90 55 aa3.73□□□□□ -1.81
VTI1B-206ENST00000556461 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
VTI1B-206ENST00000556461 LCA10Q71F78 164 aa3.73□□□□□ -1.81
VTI1B-206ENST00000556461 A0A087WVE0 104 aa3.72□□□□□ -1.81
VTI1B-206ENST00000556461 HIST1H4AP62805 103 aaKnown RBP3.72□□□□□ -1.81
VTI1B-206ENST00000556461 TRAV22A0A0B4J277 110 aa3.71□□□□□ -1.82
VTI1B-206ENST00000556461 ATP5EP2Q5VTU8 51 aa3.71□□□□□ -1.82
VTI1B-206ENST00000556461 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
VTI1B-206ENST00000556461 CSAG1Q6PB30 78 aa3.69□□□□□ -1.82
VTI1B-206ENST00000556461 FAM236AA0A1B0GUQ0 79 aa3.68□□□□□ -1.82
VTI1B-206ENST00000556461 FAM236BA0A1B0GV22 79 aa3.68□□□□□ -1.82
VTI1B-206ENST00000556461 LOC101927531A0A1B0GV80 90 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms