RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 JMJD7-PLA2G4BH0Y9G9 81 aa5.61□□□□□ -1.51
SHMT2-213ENST00000554600 LINC00313P59037 77 aa5.61□□□□□ -1.51
SHMT2-213ENST00000554600 C21orf62-AS1Q17RA5 79 aa5.61□□□□□ -1.51
SHMT2-213ENST00000554600 KRTAP19-2Q3LHN2 52 aa5.6□□□□□ -1.51
SHMT2-213ENST00000554600 IGHV6-1A0A0B4J1U7 121 aa5.59□□□□□ -1.51
SHMT2-213ENST00000554600 A8MUU9 505 aa5.59□□□□□ -1.51
SHMT2-213ENST00000554600 H3BT86 120 aa5.59□□□□□ -1.51
SHMT2-213ENST00000554600 C20orf166-AS1Q96NR2 134 aa5.59□□□□□ -1.51
SHMT2-213ENST00000554600 LINC00472Q9H8W2 130 aa5.59□□□□□ -1.51
SHMT2-213ENST00000554600 PDE6GP18545 87 aa5.58□□□□□ -1.52
SHMT2-213ENST00000554600 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
SHMT2-213ENST00000554600 A0A1B0GW54 56 aa5.57□□□□□ -1.52
SHMT2-213ENST00000554600 MT1HP80294 61 aa5.57□□□□□ -1.52
SHMT2-213ENST00000554600 Q6ZQT0 140 aa5.57□□□□□ -1.52
SHMT2-213ENST00000554600 MTURNQ8N3F0 131 aa5.57□□□□□ -1.52
SHMT2-213ENST00000554600 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
SHMT2-213ENST00000554600 M0R2T5 61 aa5.56□□□□□ -1.52
SHMT2-213ENST00000554600 NOTCH2NLQ7Z3S9 236 aa5.55□□□□□ -1.52
SHMT2-213ENST00000554600 C14orf132Q9NPU4 83 aa5.55□□□□□ -1.52
SHMT2-213ENST00000554600 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
SHMT2-213ENST00000554600 K7ERU9 68 aa5.54□□□□□ -1.52
SHMT2-213ENST00000554600 SMCPP49901 116 aaPredicted RBP5.54□□□□□ -1.52
SHMT2-213ENST00000554600 ETDBQ3ZM63 59 aa5.54□□□□□ -1.52
SHMT2-213ENST00000554600 A0A1B0GVX0 72 aa5.53□□□□□ -1.52
SHMT2-213ENST00000554600 KRTAP16-1A8MUX0 517 aa5.52□□□□□ -1.53
SHMT2-213ENST00000554600 C8orf87E5RJ46 101 aa5.52□□□□□ -1.53
SHMT2-213ENST00000554600 J3KT08 172 aa5.52□□□□□ -1.53
SHMT2-213ENST00000554600 J3QR89 54 aa5.52□□□□□ -1.53
SHMT2-213ENST00000554600 NDUFB1O75438 58 aa5.51□□□□□ -1.53
SHMT2-213ENST00000554600 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
SHMT2-213ENST00000554600 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
SHMT2-213ENST00000554600 NREPQ16612 68 aa5.47□□□□□ -1.53
SHMT2-213ENST00000554600 KRTAP10-6P60371 365 aaPredicted RBP5.46□□□□□ -1.54
SHMT2-213ENST00000554600 FLGP20930 4061 aaPredicted RBP5.45□□□□□ -1.54
SHMT2-213ENST00000554600 A8MWP4 228 aa5.45□□□□□ -1.54
SHMT2-213ENST00000554600 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
SHMT2-213ENST00000554600 C8orf17Q9NRJ1 99 aa5.44□□□□□ -1.54
SHMT2-213ENST00000554600 IGKV3D-7A0A0C4DH55 119 aa5.43□□□□□ -1.54
SHMT2-213ENST00000554600 LORP23490 312 aaPredicted RBP5.43□□□□□ -1.54
SHMT2-213ENST00000554600 ZCCHC13Q8WW36 166 aaKnown RBP5.42□□□□□ -1.54
SHMT2-213ENST00000554600 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
SHMT2-213ENST00000554600 Q6ZVQ6 151 aa5.4□□□□□ -1.54
SHMT2-213ENST00000554600 PRR15Q8IV56 129 aa5.4□□□□□ -1.54
SHMT2-213ENST00000554600 HRES1P13985 223 aa5.39□□□□□ -1.55
SHMT2-213ENST00000554600 BPY2O14599 106 aa5.38□□□□□ -1.55
SHMT2-213ENST00000554600 ACYP1P07311 99 aa5.38□□□□□ -1.55
SHMT2-213ENST00000554600 Q8N9P0 234 aaPredicted RBP5.38□□□□□ -1.55
SHMT2-213ENST00000554600 K7EQZ3 153 aa5.37□□□□□ -1.55
SHMT2-213ENST00000554600 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
SHMT2-213ENST00000554600 NDUFS5O43920 106 aa5.36□□□□□ -1.55
SHMT2-213ENST00000554600 SPINK7P58062 85 aa5.36□□□□□ -1.55
SHMT2-213ENST00000554600 TMEM254Q8TBM7 123 aa5.36□□□□□ -1.55
SHMT2-213ENST00000554600 FAM240AA0A1B0GVK7 77 aa5.35□□□□□ -1.55
SHMT2-213ENST00000554600 MRPL34Q9BQ48 92 aaKnown RBP5.35□□□□□ -1.55
SHMT2-213ENST00000554600 hDV103S1A0JD37 113 aa5.34□□□□□ -1.55
SHMT2-213ENST00000554600 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
SHMT2-213ENST00000554600 UBL5Q9BZL1 73 aa5.34□□□□□ -1.55
SHMT2-213ENST00000554600 LINC00846Q9NV44 126 aa5.33□□□□□ -1.56
SHMT2-213ENST00000554600 WFDC13Q8IUB5 93 aa5.32□□□□□ -1.56
SHMT2-213ENST00000554600 Q8N9L7 120 aa5.32□□□□□ -1.56
SHMT2-213ENST00000554600 MT-ATP8P03928 68 aa5.28□□□□□ -1.56
SHMT2-213ENST00000554600 CASC2Q6XLA1 102 aa5.28□□□□□ -1.56
SHMT2-213ENST00000554600 CXCL6P80162 114 aa5.27□□□□□ -1.57
SHMT2-213ENST00000554600 LINC00643Q86TS7 51 aa5.27□□□□□ -1.57
SHMT2-213ENST00000554600 IGKV2D-30A0A075B6S6 120 aa5.26□□□□□ -1.57
SHMT2-213ENST00000554600 HCG22E2RYF7 251 aa5.26□□□□□ -1.57
SHMT2-213ENST00000554600 IGKV2-30P06310 120 aa5.26□□□□□ -1.57
SHMT2-213ENST00000554600 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
SHMT2-213ENST00000554600 ATP5EP2Q5VTU8 51 aa5.24□□□□□ -1.57
SHMT2-213ENST00000554600 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
SHMT2-213ENST00000554600 SCGB1A1P11684 91 aa5.23□□□□□ -1.57
SHMT2-213ENST00000554600 MT2AP02795 61 aa5.22□□□□□ -1.57
SHMT2-213ENST00000554600 Q5W150 140 aa5.22□□□□□ -1.57
SHMT2-213ENST00000554600 C7orf65Q6ZTY9 151 aa5.22□□□□□ -1.57
SHMT2-213ENST00000554600 IMUPQ9GZP8 106 aa5.21□□□□□ -1.58
SHMT2-213ENST00000554600 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
SHMT2-213ENST00000554600 USH2AO75445 5202 aa5.2□□□□□ -1.58
SHMT2-213ENST00000554600 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
SHMT2-213ENST00000554600 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
SHMT2-213ENST00000554600 MT1FP04733 61 aa5.17□□□□□ -1.58
SHMT2-213ENST00000554600 PCP4P48539 62 aa5.17□□□□□ -1.58
SHMT2-213ENST00000554600 H1FX-AS1Q4G0G2 97 aa5.17□□□□□ -1.58
SHMT2-213ENST00000554600 HIST1H4AP62805 103 aaKnown RBP5.15□□□□□ -1.59
SHMT2-213ENST00000554600 MACF1Q9UPN3 7388 aaKnown RBP5.14□□□□□ -1.59
SHMT2-213ENST00000554600 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
SHMT2-213ENST00000554600 TP53AIP1Q9HCN2 124 aa5.14□□□□□ -1.59
SHMT2-213ENST00000554600 FAM236AA0A1B0GUQ0 79 aa5.1□□□□□ -1.59
SHMT2-213ENST00000554600 FAM236BA0A1B0GV22 79 aa5.1□□□□□ -1.59
SHMT2-213ENST00000554600 ANAPC13Q9BS18 74 aa5.1□□□□□ -1.59
SHMT2-213ENST00000554600 A0A087WVE0 104 aa5.09□□□□□ -1.59
SHMT2-213ENST00000554600 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
SHMT2-213ENST00000554600 ATOX1O00244 68 aa5.06□□□□□ -1.6
SHMT2-213ENST00000554600 LCE2BO14633 110 aa5.06□□□□□ -1.6
SHMT2-213ENST00000554600 C1orf64Q8NEQ6 169 aa5.05□□□□□ -1.6
SHMT2-213ENST00000554600 TRAV22A0A0B4J277 110 aa5.03□□□□□ -1.6
SHMT2-213ENST00000554600 C5orf47Q569G3 176 aa5.03□□□□□ -1.6
SHMT2-213ENST00000554600 UQCRQO14949 82 aa5.02□□□□□ -1.61
SHMT2-213ENST00000554600 S4R3F8 94 aa5.02□□□□□ -1.61
SHMT2-213ENST00000554600 SMIM20Q8N5G0 67 aa5.01□□□□□ -1.61
SHMT2-213ENST00000554600 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms