RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
PPP4R3A-203ENST00000554511 MUC2Q02817 5179 aa10.09□□□□□ -0.79
PPP4R3A-203ENST00000554511 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
PPP4R3A-203ENST00000554511 A8MWP4 228 aa10.06□□□□□ -0.8
PPP4R3A-203ENST00000554511 A0A1B0GVX0 72 aa10.04□□□□□ -0.8
PPP4R3A-203ENST00000554511 C9orf92A6NGG3 77 aa10.04□□□□□ -0.8
PPP4R3A-203ENST00000554511 IGHV6-1A0A0B4J1U7 121 aa10.03□□□□□ -0.8
PPP4R3A-203ENST00000554511 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
PPP4R3A-203ENST00000554511 LINC00313P59037 77 aa10.03□□□□□ -0.8
PPP4R3A-203ENST00000554511 K7ERU9 68 aa10.01□□□□□ -0.81
PPP4R3A-203ENST00000554511 PRR15Q8IV56 129 aa10□□□□□ -0.81
PPP4R3A-203ENST00000554511 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
PPP4R3A-203ENST00000554511 DSCR10P59022 87 aa9.99□□□□□ -0.81
PPP4R3A-203ENST00000554511 CXCL6P80162 114 aa9.99□□□□□ -0.81
PPP4R3A-203ENST00000554511 ATP5EP2Q5VTU8 51 aa9.96□□□□□ -0.82
PPP4R3A-203ENST00000554511 A0A0U1RQV1 116 aa9.95□□□□□ -0.82
PPP4R3A-203ENST00000554511 XP32Q5T750 250 aa9.95□□□□□ -0.82
PPP4R3A-203ENST00000554511 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
PPP4R3A-203ENST00000554511 K7EQZ3 153 aa9.94□□□□□ -0.82
PPP4R3A-203ENST00000554511 C8orf17Q9NRJ1 99 aa9.93□□□□□ -0.82
PPP4R3A-203ENST00000554511 NOTCH2NLQ7Z3S9 236 aa9.89□□□□□ -0.83
PPP4R3A-203ENST00000554511 SEC61BP60468 96 aaKnown RBP9.88□□□□□ -0.83
PPP4R3A-203ENST00000554511 Q8N9L7 120 aa9.88□□□□□ -0.83
PPP4R3A-203ENST00000554511 FAT4Q6V0I7 4981 aa9.86□□□□□ -0.83
PPP4R3A-203ENST00000554511 Q75L30 129 aa9.86□□□□□ -0.83
PPP4R3A-203ENST00000554511 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
PPP4R3A-203ENST00000554511 hDV103S1A0JD37 113 aa9.85□□□□□ -0.83
PPP4R3A-203ENST00000554511 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
PPP4R3A-203ENST00000554511 C20orf166-AS1Q96NR2 134 aa9.85□□□□□ -0.83
PPP4R3A-203ENST00000554511 MMP24-AS1A0A0U1RRL7 71 aa9.84□□□□□ -0.83
PPP4R3A-203ENST00000554511 KRTAP16-1A8MUX0 517 aa9.84□□□□□ -0.83
PPP4R3A-203ENST00000554511 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
PPP4R3A-203ENST00000554511 A8MUU9 505 aa9.83□□□□□ -0.84
PPP4R3A-203ENST00000554511 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
PPP4R3A-203ENST00000554511 CASC2Q6XLA1 102 aa9.82□□□□□ -0.84
PPP4R3A-203ENST00000554511 ATP11AUNQ6ZP68 121 aa9.82□□□□□ -0.84
PPP4R3A-203ENST00000554511 HCG22E2RYF7 251 aa9.81□□□□□ -0.84
PPP4R3A-203ENST00000554511 MRPL34Q9BQ48 92 aaKnown RBP9.81□□□□□ -0.84
PPP4R3A-203ENST00000554511 LCE2AQ5TA79 106 aaPredicted RBP9.8□□□□□ -0.84
PPP4R3A-203ENST00000554511 WFDC13Q8IUB5 93 aa9.79□□□□□ -0.84
PPP4R3A-203ENST00000554511 Q8N9P0 234 aaPredicted RBP9.78□□□□□ -0.84
PPP4R3A-203ENST00000554511 KRTAP9-2Q9BYQ4 174 aa9.77□□□□□ -0.85
PPP4R3A-203ENST00000554511 NDUFS5O43920 106 aa9.74□□□□□ -0.85
PPP4R3A-203ENST00000554511 PCOTHQ58A44 107 aa9.74□□□□□ -0.85
PPP4R3A-203ENST00000554511 IMUPQ9GZP8 106 aa9.7□□□□□ -0.86
PPP4R3A-203ENST00000554511 ZCCHC13Q8WW36 166 aaKnown RBP9.67□□□□□ -0.86
PPP4R3A-203ENST00000554511 TP53AIP1Q9HCN2 124 aa9.66□□□□□ -0.86
PPP4R3A-203ENST00000554511 A0A087WVE0 104 aa9.65□□□□□ -0.86
PPP4R3A-203ENST00000554511 MT-ATP8P03928 68 aa9.64□□□□□ -0.87
PPP4R3A-203ENST00000554511 SCGB1A1P11684 91 aa9.57□□□□□ -0.88
PPP4R3A-203ENST00000554511 KRTAP4-1Q9BYQ7 146 aa9.54□□□□□ -0.88
PPP4R3A-203ENST00000554511 UQCRQO14949 82 aa9.52□□□□□ -0.89
PPP4R3A-203ENST00000554511 KRTAP9-6A0A140TA67 174 aa9.51□□□□□ -0.89
PPP4R3A-203ENST00000554511 Q5W150 140 aa9.5□□□□□ -0.89
PPP4R3A-203ENST00000554511 SPINK7P58062 85 aa9.47□□□□□ -0.89
PPP4R3A-203ENST00000554511 TRAV22A0A0B4J277 110 aa9.45□□□□□ -0.9
PPP4R3A-203ENST00000554511 FAM236AA0A1B0GUQ0 79 aa9.45□□□□□ -0.9
PPP4R3A-203ENST00000554511 FAM236BA0A1B0GV22 79 aa9.45□□□□□ -0.9
PPP4R3A-203ENST00000554511 SMIM20Q8N5G0 67 aa9.45□□□□□ -0.9
PPP4R3A-203ENST00000554511 ATOX1O00244 68 aa9.43□□□□□ -0.9
PPP4R3A-203ENST00000554511 C7orf65Q6ZTY9 151 aa9.43□□□□□ -0.9
PPP4R3A-203ENST00000554511 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
PPP4R3A-203ENST00000554511 IGKV2D-30A0A075B6S6 120 aa9.41□□□□□ -0.9
PPP4R3A-203ENST00000554511 IGKV2-30P06310 120 aa9.41□□□□□ -0.9
PPP4R3A-203ENST00000554511 MP68P56378 58 aa9.4□□□□□ -0.9
PPP4R3A-203ENST00000554511 C5orf47Q569G3 176 aa9.4□□□□□ -0.9
PPP4R3A-203ENST00000554511 H0Y9P7 68 aa9.39□□□□□ -0.91
PPP4R3A-203ENST00000554511 LOC101927531A0A1B0GV80 90 aa9.37□□□□□ -0.91
PPP4R3A-203ENST00000554511 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
PPP4R3A-203ENST00000554511 TRAV7A0A075B6U4 112 aa9.34□□□□□ -0.91
PPP4R3A-203ENST00000554511 H3BPC8 53 aa9.33□□□□□ -0.92
PPP4R3A-203ENST00000554511 HRES1P13985 223 aa9.33□□□□□ -0.92
PPP4R3A-203ENST00000554511 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
PPP4R3A-203ENST00000554511 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
PPP4R3A-203ENST00000554511 COX6B2Q6YFQ2 88 aa9.31□□□□□ -0.92
PPP4R3A-203ENST00000554511 C1orf64Q8NEQ6 169 aa9.3□□□□□ -0.92
PPP4R3A-203ENST00000554511 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
PPP4R3A-203ENST00000554511 CYP4F30PQ9H0H9 118 aa9.29□□□□□ -0.92
PPP4R3A-203ENST00000554511 FAM236DA0A1B0GTK5 79 aa9.28□□□□□ -0.92
PPP4R3A-203ENST00000554511 FAM236CP0DP71 79 aa9.28□□□□□ -0.92
PPP4R3A-203ENST00000554511 KRTAP19-2Q3LHN2 52 aa9.28□□□□□ -0.92
PPP4R3A-203ENST00000554511 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
PPP4R3A-203ENST00000554511 FSIP2Q5CZC0 6907 aa9.24□□□□□ -0.93
PPP4R3A-203ENST00000554511 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
PPP4R3A-203ENST00000554511 MT1HP80294 61 aa9.23□□□□□ -0.93
PPP4R3A-203ENST00000554511 CRCT1Q9UGL9 99 aa9.19□□□□□ -0.94
PPP4R3A-203ENST00000554511 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
PPP4R3A-203ENST00000554511 COX7CP15954 63 aa9.11□□□□□ -0.95
PPP4R3A-203ENST00000554511 H1FX-AS1Q4G0G2 97 aa9.1□□□□□ -0.95
PPP4R3A-203ENST00000554511 ANAPC13Q9BS18 74 aa9.1□□□□□ -0.95
PPP4R3A-203ENST00000554511 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
PPP4R3A-203ENST00000554511 KLKP1Q107X0 134 aa9.09□□□□□ -0.95
PPP4R3A-203ENST00000554511 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
PPP4R3A-203ENST00000554511 KRTAP10-6P60371 365 aaPredicted RBP9.08□□□□□ -0.96
PPP4R3A-203ENST00000554511 M0R2T5 61 aa9.06□□□□□ -0.96
PPP4R3A-203ENST00000554511 SNURFQ9Y675 71 aa9.05□□□□□ -0.96
PPP4R3A-203ENST00000554511 FLGP20930 4061 aaPredicted RBP9.02□□□□□ -0.96
PPP4R3A-203ENST00000554511 A8MUN3 132 aa9.02□□□□□ -0.97
PPP4R3A-203ENST00000554511 KRTAP3-1Q9BYR8 98 aa8.99□□□□□ -0.97
PPP4R3A-203ENST00000554511 NDUFC1O43677 76 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms