RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 NREPQ16612 68 aa7.34□□□□□ -1.23
SHMT2-211ENST00000554310 A0A087WVE0 104 aa7.33□□□□□ -1.24
SHMT2-211ENST00000554310 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
SHMT2-211ENST00000554310 CD164Q04900 197 aa7.32□□□□□ -1.24
SHMT2-211ENST00000554310 MUC17Q685J3 4493 aa7.3□□□□□ -1.24
SHMT2-211ENST00000554310 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
SHMT2-211ENST00000554310 HRCT1Q6UXD1 115 aa7.29□□□□□ -1.24
SHMT2-211ENST00000554310 BPY2O14599 106 aa7.28□□□□□ -1.24
SHMT2-211ENST00000554310 Q5XG85 94 aa7.27□□□□□ -1.25
SHMT2-211ENST00000554310 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
SHMT2-211ENST00000554310 UQCRQO14949 82 aa7.26□□□□□ -1.25
SHMT2-211ENST00000554310 COX7CP15954 63 aa7.25□□□□□ -1.25
SHMT2-211ENST00000554310 SERP2Q8N6R1 65 aa7.25□□□□□ -1.25
SHMT2-211ENST00000554310 IGKV4-1P06312 121 aa7.24□□□□□ -1.25
SHMT2-211ENST00000554310 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
SHMT2-211ENST00000554310 ASB16-AS1Q495Z4 193 aa7.23□□□□□ -1.25
SHMT2-211ENST00000554310 SEC61BP60468 96 aaKnown RBP7.22□□□□□ -1.25
SHMT2-211ENST00000554310 XP32Q5T750 250 aa7.22□□□□□ -1.25
SHMT2-211ENST00000554310 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
SHMT2-211ENST00000554310 A0A087WSZ3 146 aa7.21□□□□□ -1.26
SHMT2-211ENST00000554310 DSCR10P59022 87 aa7.19□□□□□ -1.26
SHMT2-211ENST00000554310 TRAV7A0A075B6U4 112 aa7.18□□□□□ -1.26
SHMT2-211ENST00000554310 C1orf195Q5TG92 126 aa7.18□□□□□ -1.26
SHMT2-211ENST00000554310 Q8N9L7 120 aa7.18□□□□□ -1.26
SHMT2-211ENST00000554310 KRTAP9-2Q9BYQ4 174 aa7.17□□□□□ -1.26
SHMT2-211ENST00000554310 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
SHMT2-211ENST00000554310 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
SHMT2-211ENST00000554310 K7EQZ3 153 aa7.14□□□□□ -1.27
SHMT2-211ENST00000554310 LINC00472Q9H8W2 130 aa7.14□□□□□ -1.27
SHMT2-211ENST00000554310 J3KT08 172 aa7.12□□□□□ -1.27
SHMT2-211ENST00000554310 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
SHMT2-211ENST00000554310 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
SHMT2-211ENST00000554310 A8MWP4 228 aa7.09□□□□□ -1.27
SHMT2-211ENST00000554310 HCG22E2RYF7 251 aa7.09□□□□□ -1.27
SHMT2-211ENST00000554310 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.27
SHMT2-211ENST00000554310 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
SHMT2-211ENST00000554310 OCR1Q9BZK8 76 aa7.09□□□□□ -1.27
SHMT2-211ENST00000554310 PRR15Q8IV56 129 aa7.07□□□□□ -1.28
SHMT2-211ENST00000554310 Q96NJ1 140 aa7.07□□□□□ -1.28
SHMT2-211ENST00000554310 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
SHMT2-211ENST00000554310 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
SHMT2-211ENST00000554310 KLKP1Q107X0 134 aa7.05□□□□□ -1.28
SHMT2-211ENST00000554310 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
SHMT2-211ENST00000554310 NDUFB1O75438 58 aa7.04□□□□□ -1.28
SHMT2-211ENST00000554310 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
SHMT2-211ENST00000554310 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
SHMT2-211ENST00000554310 TMEM258P61165 79 aa7.02□□□□□ -1.29
SHMT2-211ENST00000554310 CASC2Q6XLA1 102 aa7□□□□□ -1.29
SHMT2-211ENST00000554310 WFDC13Q8IUB5 93 aa7□□□□□ -1.29
SHMT2-211ENST00000554310 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
SHMT2-211ENST00000554310 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
SHMT2-211ENST00000554310 NDUFC1O43677 76 aa6.99□□□□□ -1.29
SHMT2-211ENST00000554310 A0A1B0GVX0 72 aa6.97□□□□□ -1.29
SHMT2-211ENST00000554310 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
SHMT2-211ENST00000554310 H7BZZ5 65 aa6.96□□□□□ -1.3
SHMT2-211ENST00000554310 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
SHMT2-211ENST00000554310 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
SHMT2-211ENST00000554310 hDV103S1A0JD37 113 aa6.94□□□□□ -1.3
SHMT2-211ENST00000554310 Q75L30 129 aa6.94□□□□□ -1.3
SHMT2-211ENST00000554310 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
SHMT2-211ENST00000554310 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
SHMT2-211ENST00000554310 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
SHMT2-211ENST00000554310 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
SHMT2-211ENST00000554310 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.3
SHMT2-211ENST00000554310 H3BPC8 53 aa6.9□□□□□ -1.3
SHMT2-211ENST00000554310 FAM236CP0DP71 79 aa6.9□□□□□ -1.3
SHMT2-211ENST00000554310 ATP11AUNQ6ZP68 121 aa6.9□□□□□ -1.3
SHMT2-211ENST00000554310 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
SHMT2-211ENST00000554310 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
SHMT2-211ENST00000554310 RPS28P62857 69 aaKnown RBP6.89□□□□□ -1.31
SHMT2-211ENST00000554310 TP53AIP1Q9HCN2 124 aa6.89□□□□□ -1.31
SHMT2-211ENST00000554310 MP68P56378 58 aa6.88□□□□□ -1.31
SHMT2-211ENST00000554310 C20orf166-AS1Q96NR2 134 aa6.88□□□□□ -1.31
SHMT2-211ENST00000554310 MRPL34Q9BQ48 92 aaKnown RBP6.88□□□□□ -1.31
SHMT2-211ENST00000554310 A8MUU9 505 aa6.86□□□□□ -1.31
SHMT2-211ENST00000554310 H0Y9P7 68 aa6.86□□□□□ -1.31
SHMT2-211ENST00000554310 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
SHMT2-211ENST00000554310 MT1HP80294 61 aa6.84□□□□□ -1.31
SHMT2-211ENST00000554310 NOTCH2NLQ7Z3S9 236 aa6.84□□□□□ -1.31
SHMT2-211ENST00000554310 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
SHMT2-211ENST00000554310 LINC00313P59037 77 aa6.82□□□□□ -1.32
SHMT2-211ENST00000554310 LINC00208Q96KT6 92 aa6.82□□□□□ -1.32
SHMT2-211ENST00000554310 SERP1Q9Y6X1 66 aa6.8□□□□□ -1.32
SHMT2-211ENST00000554310 KRTAP16-1A8MUX0 517 aa6.79□□□□□ -1.32
SHMT2-211ENST00000554310 NDUFS5O43920 106 aa6.79□□□□□ -1.32
SHMT2-211ENST00000554310 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
SHMT2-211ENST00000554310 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
SHMT2-211ENST00000554310 FLGP20930 4061 aaPredicted RBP6.74□□□□□ -1.33
SHMT2-211ENST00000554310 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
SHMT2-211ENST00000554310 CYP4F30PQ9H0H9 118 aa6.74□□□□□ -1.33
SHMT2-211ENST00000554310 M0R2T5 61 aa6.73□□□□□ -1.33
SHMT2-211ENST00000554310 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
SHMT2-211ENST00000554310 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
SHMT2-211ENST00000554310 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
SHMT2-211ENST00000554310 CRCT1Q9UGL9 99 aa6.7□□□□□ -1.34
SHMT2-211ENST00000554310 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
SHMT2-211ENST00000554310 Q5W150 140 aa6.69□□□□□ -1.34
SHMT2-211ENST00000554310 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
SHMT2-211ENST00000554310 FSIP2Q5CZC0 6907 aa6.62□□□□□ -1.35
SHMT2-211ENST00000554310 HRES1P13985 223 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms