RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CD164Q04900 197 aa9.33□□□□□ -0.92
ACTN1-209ENST00000553659 Q8N9L7 120 aa9.32□□□□□ -0.92
ACTN1-209ENST00000553659 LINC00472Q9H8W2 130 aa9.32□□□□□ -0.92
ACTN1-209ENST00000553659 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
ACTN1-209ENST00000553659 A8MWP4 228 aa9.28□□□□□ -0.92
ACTN1-209ENST00000553659 K7EQZ3 153 aa9.28□□□□□ -0.92
ACTN1-209ENST00000553659 NDUFB1O75438 58 aa9.28□□□□□ -0.92
ACTN1-209ENST00000553659 HCG22E2RYF7 251 aa9.27□□□□□ -0.93
ACTN1-209ENST00000553659 MUC2Q02817 5179 aa9.26□□□□□ -0.93
ACTN1-209ENST00000553659 PRR15Q8IV56 129 aa9.25□□□□□ -0.93
ACTN1-209ENST00000553659 ANAPC11Q9NYG5 84 aa9.25□□□□□ -0.93
ACTN1-209ENST00000553659 A0A087X002 238 aa9.24□□□□□ -0.93
ACTN1-209ENST00000553659 KRTAP9-2Q9BYQ4 174 aa9.24□□□□□ -0.93
ACTN1-209ENST00000553659 TYMSOSQ8TAI1 123 aa9.23□□□□□ -0.93
ACTN1-209ENST00000553659 DEFB116Q30KQ4 102 aa9.21□□□□□ -0.94
ACTN1-209ENST00000553659 ASB16-AS1Q495Z4 193 aa9.21□□□□□ -0.94
ACTN1-209ENST00000553659 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.94
ACTN1-209ENST00000553659 OCR1Q9BZK8 76 aa9.21□□□□□ -0.94
ACTN1-209ENST00000553659 Q96NJ1 140 aa9.19□□□□□ -0.94
ACTN1-209ENST00000553659 KLKP1Q107X0 134 aa9.18□□□□□ -0.94
ACTN1-209ENST00000553659 LCE2AQ5TA79 106 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-209ENST00000553659 Q5XG85 94 aa9.18□□□□□ -0.94
ACTN1-209ENST00000553659 NDUFC1O43677 76 aa9.17□□□□□ -0.94
ACTN1-209ENST00000553659 C20orf197Q8N268 126 aa9.17□□□□□ -0.94
ACTN1-209ENST00000553659 CASC2Q6XLA1 102 aa9.16□□□□□ -0.94
ACTN1-209ENST00000553659 TMEM258P61165 79 aa9.15□□□□□ -0.94
ACTN1-209ENST00000553659 KRTAP13-2Q52LG2 175 aa9.15□□□□□ -0.94
ACTN1-209ENST00000553659 LIMD2Q9BT23 127 aa9.15□□□□□ -0.94
ACTN1-209ENST00000553659 A0A1B0GVX0 72 aa9.12□□□□□ -0.95
ACTN1-209ENST00000553659 C5orf47Q569G3 176 aa9.12□□□□□ -0.95
ACTN1-209ENST00000553659 WFDC13Q8IUB5 93 aa9.12□□□□□ -0.95
ACTN1-209ENST00000553659 TMEM254Q8TBM7 123 aa9.12□□□□□ -0.95
ACTN1-209ENST00000553659 RETNLBQ9BQ08 111 aa9.12□□□□□ -0.95
ACTN1-209ENST00000553659 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
ACTN1-209ENST00000553659 LINC00304Q8N9R0 145 aa9.11□□□□□ -0.95
ACTN1-209ENST00000553659 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
ACTN1-209ENST00000553659 hDV103S1A0JD37 113 aa9.09□□□□□ -0.95
ACTN1-209ENST00000553659 TPRXLQ17RH7 258 aa9.09□□□□□ -0.95
ACTN1-209ENST00000553659 C8orf17Q9NRJ1 99 aa9.09□□□□□ -0.95
ACTN1-209ENST00000553659 FAT4Q6V0I7 4981 aa9.08□□□□□ -0.96
ACTN1-209ENST00000553659 IGLV7-46A0A075B6I9 117 aa9.07□□□□□ -0.96
ACTN1-209ENST00000553659 C8orf87E5RJ46 101 aa9.07□□□□□ -0.96
ACTN1-209ENST00000553659 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
ACTN1-209ENST00000553659 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
ACTN1-209ENST00000553659 H3BPC8 53 aa9.06□□□□□ -0.96
ACTN1-209ENST00000553659 SPINK1P00995 79 aa9.06□□□□□ -0.96
ACTN1-209ENST00000553659 MP68P56378 58 aa9.06□□□□□ -0.96
ACTN1-209ENST00000553659 TP53AIP1Q9HCN2 124 aa9.06□□□□□ -0.96
ACTN1-209ENST00000553659 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
ACTN1-209ENST00000553659 KRTAP9-6A0A140TA67 174 aa9.03□□□□□ -0.96
ACTN1-209ENST00000553659 ATP5EP56381 51 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-209ENST00000553659 SNURFQ9Y675 71 aa9.03□□□□□ -0.96
ACTN1-209ENST00000553659 H7BZZ5 65 aa9.02□□□□□ -0.97
ACTN1-209ENST00000553659 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
ACTN1-209ENST00000553659 MRPL34Q9BQ48 92 aaKnown RBP9□□□□□ -0.97
ACTN1-209ENST00000553659 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
ACTN1-209ENST00000553659 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
ACTN1-209ENST00000553659 MUC17Q685J3 4493 aa8.98□□□□□ -0.97
ACTN1-209ENST00000553659 C1orf195Q5TG92 126 aa8.98□□□□□ -0.97
ACTN1-209ENST00000553659 ZCCHC13Q8WW36 166 aaKnown RBP8.96□□□□□ -0.98
ACTN1-209ENST00000553659 TRAV22A0A0B4J277 110 aa8.95□□□□□ -0.98
ACTN1-209ENST00000553659 H0Y9P7 68 aa8.95□□□□□ -0.98
ACTN1-209ENST00000553659 RPS28P62857 69 aaKnown RBP8.94□□□□□ -0.98
ACTN1-209ENST00000553659 FP248Q71RG6 208 aaPredicted RBP8.94□□□□□ -0.98
ACTN1-209ENST00000553659 LINC00313P59037 77 aa8.92□□□□□ -0.98
ACTN1-209ENST00000553659 NDUFS5O43920 106 aa8.91□□□□□ -0.98
ACTN1-209ENST00000553659 KRTAP13-3Q3SY46 172 aa8.89□□□□□ -0.99
ACTN1-209ENST00000553659 LINC00208Q96KT6 92 aa8.89□□□□□ -0.99
ACTN1-209ENST00000553659 NOTCH2NLQ7Z3S9 236 aa8.86□□□□□ -0.99
ACTN1-209ENST00000553659 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
ACTN1-209ENST00000553659 SERP1Q9Y6X1 66 aa8.85□□□□□ -0.99
ACTN1-209ENST00000553659 Q8N9P0 234 aaPredicted RBP8.83□□□□□ -1
ACTN1-209ENST00000553659 SEC61BP60468 96 aaKnown RBP8.82□□□□□ -1
ACTN1-209ENST00000553659 SPANXA2-OT1Q8N9U9 137 aa8.82□□□□□ -1
ACTN1-209ENST00000553659 KRTAP4-1Q9BYQ7 146 aa8.81□□□□□ -1
ACTN1-209ENST00000553659 LOC101927531A0A1B0GV80 90 aa8.8□□□□□ -1
ACTN1-209ENST00000553659 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
ACTN1-209ENST00000553659 CYP4F30PQ9H0H9 118 aa8.78□□□□□ -1
ACTN1-209ENST00000553659 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1.01
ACTN1-209ENST00000553659 XP32Q5T750 250 aa8.71□□□□□ -1.02
ACTN1-209ENST00000553659 Q5W150 140 aa8.68□□□□□ -1.02
ACTN1-209ENST00000553659 CRCT1Q9UGL9 99 aa8.68□□□□□ -1.02
ACTN1-209ENST00000553659 SMIM26A0A096LP01 95 aa8.66□□□□□ -1.02
ACTN1-209ENST00000553659 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
ACTN1-209ENST00000553659 PCOTHQ58A44 107 aa8.63□□□□□ -1.03
ACTN1-209ENST00000553659 IGKV2-30P06310 120 aa8.62□□□□□ -1.03
ACTN1-209ENST00000553659 C20orf166-AS1Q96NR2 134 aa8.61□□□□□ -1.03
ACTN1-209ENST00000553659 KRTAP19-2Q3LHN2 52 aa8.6□□□□□ -1.03
ACTN1-209ENST00000553659 A8MUU9 505 aa8.59□□□□□ -1.03
ACTN1-209ENST00000553659 FSIP2Q5CZC0 6907 aa8.58□□□□□ -1.04
ACTN1-209ENST00000553659 MT1HP80294 61 aa8.57□□□□□ -1.04
ACTN1-209ENST00000553659 C9orf92A6NGG3 77 aa8.53□□□□□ -1.04
ACTN1-209ENST00000553659 C7orf65Q6ZTY9 151 aa8.53□□□□□ -1.04
ACTN1-209ENST00000553659 Q75L30 129 aa8.52□□□□□ -1.05
ACTN1-209ENST00000553659 HRES1P13985 223 aa8.5□□□□□ -1.05
ACTN1-209ENST00000553659 IGKV2D-30A0A075B6S6 120 aa8.49□□□□□ -1.05
ACTN1-209ENST00000553659 ACYP2P14621 99 aa8.48□□□□□ -1.05
ACTN1-209ENST00000553659 COA5Q86WW8 74 aa8.48□□□□□ -1.05
ACTN1-209ENST00000553659 V9GYY9 64 aa8.48□□□□□ -1.05
ACTN1-209ENST00000553659 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 550 ms