RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 C9orf92A6NGG3 77 aa10.61□□□□□ -0.71
PSEN1-207ENST00000553599 LRP2P98164 4655 aa10.59□□□□□ -0.71
PSEN1-207ENST00000553599 LPAP08519 4548 aa10.59□□□□□ -0.71
PSEN1-207ENST00000553599 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
PSEN1-207ENST00000553599 IGHV6-1A0A0B4J1U7 121 aa10.57□□□□□ -0.72
PSEN1-207ENST00000553599 XP32Q5T750 250 aa10.57□□□□□ -0.72
PSEN1-207ENST00000553599 DSCR10P59022 87 aa10.56□□□□□ -0.72
PSEN1-207ENST00000553599 LINC00313P59037 77 aa10.56□□□□□ -0.72
PSEN1-207ENST00000553599 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
PSEN1-207ENST00000553599 PRR15Q8IV56 129 aa10.55□□□□□ -0.72
PSEN1-207ENST00000553599 CXCL6P80162 114 aa10.52□□□□□ -0.73
PSEN1-207ENST00000553599 ATP5EP2Q5VTU8 51 aa10.49□□□□□ -0.73
PSEN1-207ENST00000553599 K7EQZ3 153 aa10.48□□□□□ -0.73
PSEN1-207ENST00000553599 NOTCH2NLQ7Z3S9 236 aa10.48□□□□□ -0.73
PSEN1-207ENST00000553599 C8orf17Q9NRJ1 99 aa10.48□□□□□ -0.73
PSEN1-207ENST00000553599 K7ERU9 68 aa10.47□□□□□ -0.73
PSEN1-207ENST00000553599 SEC61BP60468 96 aaKnown RBP10.46□□□□□ -0.73
PSEN1-207ENST00000553599 Q75L30 129 aa10.46□□□□□ -0.73
PSEN1-207ENST00000553599 KRTAP16-1A8MUX0 517 aa10.45□□□□□ -0.74
PSEN1-207ENST00000553599 RPL37P61927 97 aaKnown RBP10.45□□□□□ -0.74
PSEN1-207ENST00000553599 LINC00643Q86TS7 51 aa10.45□□□□□ -0.74
PSEN1-207ENST00000553599 C20orf166-AS1Q96NR2 134 aa10.45□□□□□ -0.74
PSEN1-207ENST00000553599 A8MUU9 505 aa10.43□□□□□ -0.74
PSEN1-207ENST00000553599 MMP24-AS1A0A0U1RRL7 71 aa10.41□□□□□ -0.74
PSEN1-207ENST00000553599 Q8N9L7 120 aa10.41□□□□□ -0.74
PSEN1-207ENST00000553599 hDV103S1A0JD37 113 aa10.38□□□□□ -0.75
PSEN1-207ENST00000553599 TMEM254Q8TBM7 123 aa10.38□□□□□ -0.75
PSEN1-207ENST00000553599 UBR4Q5T4S7 5183 aa10.37□□□□□ -0.75
PSEN1-207ENST00000553599 Q8N9P0 234 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-207ENST00000553599 ATP11AUNQ6ZP68 121 aa10.35□□□□□ -0.75
PSEN1-207ENST00000553599 MRPL34Q9BQ48 92 aaKnown RBP10.34□□□□□ -0.75
PSEN1-207ENST00000553599 HCG22E2RYF7 251 aa10.33□□□□□ -0.76
PSEN1-207ENST00000553599 CASC2Q6XLA1 102 aa10.33□□□□□ -0.76
PSEN1-207ENST00000553599 PCOTHQ58A44 107 aa10.32□□□□□ -0.76
PSEN1-207ENST00000553599 MUC17Q685J3 4493 aa10.32□□□□□ -0.76
PSEN1-207ENST00000553599 WFDC13Q8IUB5 93 aa10.3□□□□□ -0.76
PSEN1-207ENST00000553599 HIST1H4AP62805 103 aaKnown RBP10.28□□□□□ -0.76
PSEN1-207ENST00000553599 NDUFS5O43920 106 aa10.22□□□□□ -0.77
PSEN1-207ENST00000553599 ZCCHC13Q8WW36 166 aaKnown RBP10.22□□□□□ -0.77
PSEN1-207ENST00000553599 IMUPQ9GZP8 106 aa10.19□□□□□ -0.78
PSEN1-207ENST00000553599 RNF213Q63HN8 5207 aa10.17□□□□□ -0.78
PSEN1-207ENST00000553599 TP53AIP1Q9HCN2 124 aa10.16□□□□□ -0.78
PSEN1-207ENST00000553599 A0A087WVE0 104 aa10.15□□□□□ -0.78
PSEN1-207ENST00000553599 KRTAP4-1Q9BYQ7 146 aa10.13□□□□□ -0.79
PSEN1-207ENST00000553599 MT-ATP8P03928 68 aa10.12□□□□□ -0.79
PSEN1-207ENST00000553599 MUC2Q02817 5179 aa10.07□□□□□ -0.8
PSEN1-207ENST00000553599 Q5W150 140 aa10.05□□□□□ -0.8
PSEN1-207ENST00000553599 A0A0U1RQV1 116 aa10.03□□□□□ -0.8
PSEN1-207ENST00000553599 UQCRQO14949 82 aa10.01□□□□□ -0.81
PSEN1-207ENST00000553599 SPINK7P58062 85 aa10□□□□□ -0.81
PSEN1-207ENST00000553599 SCGB1A1P11684 91 aa9.98□□□□□ -0.81
PSEN1-207ENST00000553599 TRAV22A0A0B4J277 110 aa9.96□□□□□ -0.82
PSEN1-207ENST00000553599 C7orf65Q6ZTY9 151 aa9.95□□□□□ -0.82
PSEN1-207ENST00000553599 OCR1Q9BZK8 76 aa9.95□□□□□ -0.82
PSEN1-207ENST00000553599 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
PSEN1-207ENST00000553599 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
PSEN1-207ENST00000553599 ATOX1O00244 68 aa9.92□□□□□ -0.82
PSEN1-207ENST00000553599 IGKV2D-30A0A075B6S6 120 aa9.91□□□□□ -0.82
PSEN1-207ENST00000553599 IGKV2-30P06310 120 aa9.91□□□□□ -0.82
PSEN1-207ENST00000553599 HRES1P13985 223 aa9.91□□□□□ -0.82
PSEN1-207ENST00000553599 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
PSEN1-207ENST00000553599 RBM12B-AS1Q9P1G2 102 aa9.88□□□□□ -0.83
PSEN1-207ENST00000553599 H0Y9P7 68 aa9.87□□□□□ -0.83
PSEN1-207ENST00000553599 C5orf47Q569G3 176 aa9.87□□□□□ -0.83
PSEN1-207ENST00000553599 MPLKIPQ8TAP9 179 aa9.87□□□□□ -0.83
PSEN1-207ENST00000553599 LOC101927531A0A1B0GV80 90 aa9.86□□□□□ -0.83
PSEN1-207ENST00000553599 KRTAP19-2Q3LHN2 52 aa9.85□□□□□ -0.83
PSEN1-207ENST00000553599 MP68P56378 58 aa9.84□□□□□ -0.83
PSEN1-207ENST00000553599 COX6B2Q6YFQ2 88 aa9.83□□□□□ -0.84
PSEN1-207ENST00000553599 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
PSEN1-207ENST00000553599 FAT4Q6V0I7 4981 aa9.81□□□□□ -0.84
PSEN1-207ENST00000553599 H3BPC8 53 aa9.8□□□□□ -0.84
PSEN1-207ENST00000553599 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
PSEN1-207ENST00000553599 LCE2CQ5TA81 110 aa9.79□□□□□ -0.84
PSEN1-207ENST00000553599 C1orf64Q8NEQ6 169 aa9.78□□□□□ -0.84
PSEN1-207ENST00000553599 FAM236DA0A1B0GTK5 79 aa9.77□□□□□ -0.85
PSEN1-207ENST00000553599 FAM236CP0DP71 79 aa9.77□□□□□ -0.85
PSEN1-207ENST00000553599 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
PSEN1-207ENST00000553599 SERP2Q8N6R1 65 aa9.69□□□□□ -0.86
PSEN1-207ENST00000553599 C4orf26Q17RF5 130 aa9.68□□□□□ -0.86
PSEN1-207ENST00000553599 LCE2AQ5TA79 106 aaPredicted RBP9.65□□□□□ -0.86
PSEN1-207ENST00000553599 MT1HP80294 61 aa9.64□□□□□ -0.87
PSEN1-207ENST00000553599 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
PSEN1-207ENST00000553599 FLGP20930 4061 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-207ENST00000553599 KLKP1Q107X0 134 aa9.59□□□□□ -0.87
PSEN1-207ENST00000553599 COX7CP15954 63 aa9.54□□□□□ -0.88
PSEN1-207ENST00000553599 KRTAP3-1Q9BYR8 98 aa9.54□□□□□ -0.88
PSEN1-207ENST00000553599 M0R2T5 61 aa9.53□□□□□ -0.88
PSEN1-207ENST00000553599 C20orf197Q8N268 126 aa9.52□□□□□ -0.89
PSEN1-207ENST00000553599 A8MUN3 132 aa9.51□□□□□ -0.89
PSEN1-207ENST00000553599 ANAPC13Q9BS18 74 aa9.51□□□□□ -0.89
PSEN1-207ENST00000553599 SNURFQ9Y675 71 aa9.49□□□□□ -0.89
PSEN1-207ENST00000553599 S4R3F8 94 aa9.41□□□□□ -0.9
PSEN1-207ENST00000553599 DMAC1Q96GE9 116 aa9.39□□□□□ -0.91
PSEN1-207ENST00000553599 NDUFC1O43677 76 aa9.38□□□□□ -0.91
PSEN1-207ENST00000553599 KRTAP10-6P60371 365 aaPredicted RBP9.38□□□□□ -0.91
PSEN1-207ENST00000553599 SPANXA2-OT1Q8N9U9 137 aa9.37□□□□□ -0.91
PSEN1-207ENST00000553599 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
PSEN1-207ENST00000553599 LCA10Q71F78 164 aa9.32□□□□□ -0.92
PSEN1-207ENST00000553599 ACYP2P14621 99 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms