RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CCKP06307 115 aa5.63□□□□□ -1.51
PRPF40B-212ENST00000551111 VAMP8Q9BV40 100 aa5.62□□□□□ -1.51
PRPF40B-212ENST00000551111 ORMDL1Q9P0S3 153 aa5.62□□□□□ -1.51
PRPF40B-212ENST00000551111 TRACP01848 142 aa5.6□□□□□ -1.51
PRPF40B-212ENST00000551111 A0A1B0GVX0 72 aa5.59□□□□□ -1.51
PRPF40B-212ENST00000551111 DNAL4O96015 105 aa5.59□□□□□ -1.51
PRPF40B-212ENST00000551111 TMEM256-PLSCR3K7ERE1 68 aa5.58□□□□□ -1.52
PRPF40B-212ENST00000551111 S100A1P23297 94 aa5.58□□□□□ -1.52
PRPF40B-212ENST00000551111 PSMB2P49721 201 aa5.58□□□□□ -1.52
PRPF40B-212ENST00000551111 SPINK7P58062 85 aa5.58□□□□□ -1.52
PRPF40B-212ENST00000551111 VPS25Q9BRG1 176 aa5.58□□□□□ -1.52
PRPF40B-212ENST00000551111 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
PRPF40B-212ENST00000551111 KRTAP19-6Q3LI70 58 aa5.56□□□□□ -1.52
PRPF40B-212ENST00000551111 C8orf87E5RJ46 101 aa5.55□□□□□ -1.52
PRPF40B-212ENST00000551111 UBE2V1Q13404 147 aa5.55□□□□□ -1.52
PRPF40B-212ENST00000551111 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
PRPF40B-212ENST00000551111 H3BQ85 93 aa5.53□□□□□ -1.52
PRPF40B-212ENST00000551111 HSD52Q0P140 79 aa5.53□□□□□ -1.52
PRPF40B-212ENST00000551111 RBM3P98179 157 aaKnown RBP5.52□□□□□ -1.53
PRPF40B-212ENST00000551111 PYY3Q5JQD4 70 aa5.52□□□□□ -1.53
PRPF40B-212ENST00000551111 COX6CP09669 75 aa5.51□□□□□ -1.53
PRPF40B-212ENST00000551111 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
PRPF40B-212ENST00000551111 WFDC13Q8IUB5 93 aa5.51□□□□□ -1.53
PRPF40B-212ENST00000551111 MTURNQ8N3F0 131 aa5.51□□□□□ -1.53
PRPF40B-212ENST00000551111 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
PRPF40B-212ENST00000551111 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
PRPF40B-212ENST00000551111 Q6ZQT0 140 aa5.49□□□□□ -1.53
PRPF40B-212ENST00000551111 DSCR8Q96T75 97 aa5.49□□□□□ -1.53
PRPF40B-212ENST00000551111 C8orf17Q9NRJ1 99 aa5.48□□□□□ -1.53
PRPF40B-212ENST00000551111 BAALC-AS2P0C853 105 aa5.47□□□□□ -1.53
PRPF40B-212ENST00000551111 SCGB1C2P0DMR2 95 aa5.47□□□□□ -1.53
PRPF40B-212ENST00000551111 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.53
PRPF40B-212ENST00000551111 IGKV3D-7A0A0C4DH55 119 aa5.46□□□□□ -1.54
PRPF40B-212ENST00000551111 A8MWP4 228 aa5.46□□□□□ -1.54
PRPF40B-212ENST00000551111 C9JAW5 83 aa5.46□□□□□ -1.54
PRPF40B-212ENST00000551111 J3KT08 172 aa5.46□□□□□ -1.54
PRPF40B-212ENST00000551111 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
PRPF40B-212ENST00000551111 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
PRPF40B-212ENST00000551111 NDUFB1O75438 58 aa5.43□□□□□ -1.54
PRPF40B-212ENST00000551111 LYRM7Q5U5X0 104 aa5.42□□□□□ -1.54
PRPF40B-212ENST00000551111 Q6ZVQ6 151 aa5.42□□□□□ -1.54
PRPF40B-212ENST00000551111 NAA38Q9BRA0 125 aaKnown RBP5.42□□□□□ -1.54
PRPF40B-212ENST00000551111 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
PRPF40B-212ENST00000551111 UQCR10Q9UDW1 63 aa5.42□□□□□ -1.54
PRPF40B-212ENST00000551111 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
PRPF40B-212ENST00000551111 LOC110117498A0A087WWA1 95 aa5.38□□□□□ -1.55
PRPF40B-212ENST00000551111 MMP24-AS1A0A0U1RRL7 71 aa5.38□□□□□ -1.55
PRPF40B-212ENST00000551111 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
PRPF40B-212ENST00000551111 PRR15Q8IV56 129 aa5.38□□□□□ -1.55
PRPF40B-212ENST00000551111 C14orf132Q9NPU4 83 aa5.37□□□□□ -1.55
PRPF40B-212ENST00000551111 Q5W150 140 aa5.35□□□□□ -1.55
PRPF40B-212ENST00000551111 MRPL34Q9BQ48 92 aaKnown RBP5.35□□□□□ -1.55
PRPF40B-212ENST00000551111 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
PRPF40B-212ENST00000551111 JMJD7-PLA2G4BH0Y9G9 81 aa5.34□□□□□ -1.55
PRPF40B-212ENST00000551111 ATXN8Q156A1 80 aa5.33□□□□□ -1.56
PRPF40B-212ENST00000551111 TMEM254Q8TBM7 123 aa5.33□□□□□ -1.56
PRPF40B-212ENST00000551111 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
PRPF40B-212ENST00000551111 A0A1B0GW54 56 aa5.32□□□□□ -1.56
PRPF40B-212ENST00000551111 K7EQZ3 153 aa5.32□□□□□ -1.56
PRPF40B-212ENST00000551111 NREPQ16612 68 aa5.32□□□□□ -1.56
PRPF40B-212ENST00000551111 IGKV2D-30A0A075B6S6 120 aa5.31□□□□□ -1.56
PRPF40B-212ENST00000551111 NDUFS5O43920 106 aa5.31□□□□□ -1.56
PRPF40B-212ENST00000551111 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
PRPF40B-212ENST00000551111 hDV103S1A0JD37 113 aa5.3□□□□□ -1.56
PRPF40B-212ENST00000551111 PDE6GP18545 87 aa5.29□□□□□ -1.56
PRPF40B-212ENST00000551111 MUC12Q9UKN1 5478 aa5.28□□□□□ -1.56
PRPF40B-212ENST00000551111 MT1BP07438 61 aa5.27□□□□□ -1.57
PRPF40B-212ENST00000551111 C4orf26Q17RF5 130 aa5.27□□□□□ -1.57
PRPF40B-212ENST00000551111 C7orf65Q6ZTY9 151 aa5.25□□□□□ -1.57
PRPF40B-212ENST00000551111 Q8N9L7 120 aa5.25□□□□□ -1.57
PRPF40B-212ENST00000551111 C5orf47Q569G3 176 aa5.24□□□□□ -1.57
PRPF40B-212ENST00000551111 M0R143 59 aa5.23□□□□□ -1.57
PRPF40B-212ENST00000551111 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
PRPF40B-212ENST00000551111 A6NN06 94 aa5.21□□□□□ -1.58
PRPF40B-212ENST00000551111 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
PRPF40B-212ENST00000551111 BPY2O14599 106 aa5.2□□□□□ -1.58
PRPF40B-212ENST00000551111 C9orf118A6NHY6 69 aa5.19□□□□□ -1.58
PRPF40B-212ENST00000551111 FAM236AA0A1B0GUQ0 79 aa5.18□□□□□ -1.58
PRPF40B-212ENST00000551111 FAM236BA0A1B0GV22 79 aa5.18□□□□□ -1.58
PRPF40B-212ENST00000551111 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
PRPF40B-212ENST00000551111 CASC2Q6XLA1 102 aa5.18□□□□□ -1.58
PRPF40B-212ENST00000551111 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
PRPF40B-212ENST00000551111 BATFQ16520 125 aa5.16□□□□□ -1.58
PRPF40B-212ENST00000551111 Q5VV11 94 aa5.16□□□□□ -1.58
PRPF40B-212ENST00000551111 H3BT86 120 aa5.15□□□□□ -1.59
PRPF40B-212ENST00000551111 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
PRPF40B-212ENST00000551111 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
PRPF40B-212ENST00000551111 LCA10Q71F78 164 aa5.14□□□□□ -1.59
PRPF40B-212ENST00000551111 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
PRPF40B-212ENST00000551111 NEBP20929 6669 aa5.14□□□□□ -1.59
PRPF40B-212ENST00000551111 S4R3F8 94 aa5.13□□□□□ -1.59
PRPF40B-212ENST00000551111 TAX1BP3O14907 124 aa5.12□□□□□ -1.59
PRPF40B-212ENST00000551111 CXCL6P80162 114 aa5.11□□□□□ -1.59
PRPF40B-212ENST00000551111 C1orf64Q8NEQ6 169 aa5.11□□□□□ -1.59
PRPF40B-212ENST00000551111 A0A1W2PPM0 123 aa5.1□□□□□ -1.59
PRPF40B-212ENST00000551111 TSTD3H0UI37 97 aa5.1□□□□□ -1.59
PRPF40B-212ENST00000551111 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
PRPF40B-212ENST00000551111 CSAG1Q6PB30 78 aa5.1□□□□□ -1.59
PRPF40B-212ENST00000551111 KMT2DO14686 5537 aa5.1□□□□□ -1.59
PRPF40B-212ENST00000551111 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms