RNA–Protein interactions for RNA: ENST00000548021.5

CNOT2-208, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-208ENST00000548021 LRP1BQ9NZR2 4599 aa4.99□□□□□ -1.61
CNOT2-208ENST00000548021 A0A087X002 238 aa4.99□□□□□ -1.61
CNOT2-208ENST00000548021 A0A0U1RQV1 116 aa4.99□□□□□ -1.61
CNOT2-208ENST00000548021 MMP24-AS1A0A0U1RRL7 71 aa4.99□□□□□ -1.61
CNOT2-208ENST00000548021 KRTAP1-4P0C5Y4 121 aa4.99□□□□□ -1.61
CNOT2-208ENST00000548021 FAM229BQ4G0N7 80 aa4.99□□□□□ -1.61
CNOT2-208ENST00000548021 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
CNOT2-208ENST00000548021 TMEM254Q8TBM7 123 aa4.99□□□□□ -1.61
CNOT2-208ENST00000548021 H7BZZ5 65 aa4.98□□□□□ -1.61
CNOT2-208ENST00000548021 CD164Q04900 197 aa4.98□□□□□ -1.61
CNOT2-208ENST00000548021 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
CNOT2-208ENST00000548021 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
CNOT2-208ENST00000548021 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
CNOT2-208ENST00000548021 ASB16-AS1Q495Z4 193 aa4.95□□□□□ -1.62
CNOT2-208ENST00000548021 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
CNOT2-208ENST00000548021 C8orf17Q9NRJ1 99 aa4.95□□□□□ -1.62
CNOT2-208ENST00000548021 VPS13BQ7Z7G8 4022 aa4.94□□□□□ -1.62
CNOT2-208ENST00000548021 PKHD1P08F94 4074 aa4.94□□□□□ -1.62
CNOT2-208ENST00000548021 FAM236DA0A1B0GTK5 79 aa4.94□□□□□ -1.62
CNOT2-208ENST00000548021 A0A1B0GVX0 72 aa4.94□□□□□ -1.62
CNOT2-208ENST00000548021 NDUFB1O75438 58 aa4.94□□□□□ -1.62
CNOT2-208ENST00000548021 FAM236CP0DP71 79 aa4.94□□□□□ -1.62
CNOT2-208ENST00000548021 NDUFC1O43677 76 aa4.93□□□□□ -1.62
CNOT2-208ENST00000548021 APOBP04114 4563 aaKnown RBP4.92□□□□□ -1.62
CNOT2-208ENST00000548021 PKHD1L1Q86WI1 4243 aa4.92□□□□□ -1.62
CNOT2-208ENST00000548021 IGHV6-1A0A0B4J1U7 121 aa4.92□□□□□ -1.62
CNOT2-208ENST00000548021 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
CNOT2-208ENST00000548021 KRTAP10-4P60372 401 aaPredicted RBP4.92□□□□□ -1.62
CNOT2-208ENST00000548021 C5orf47Q569G3 176 aa4.91□□□□□ -1.62
CNOT2-208ENST00000548021 Q5XG85 94 aa4.91□□□□□ -1.62
CNOT2-208ENST00000548021 SPINK6Q6UWN8 80 aa4.91□□□□□ -1.62
CNOT2-208ENST00000548021 CDK2AP2O75956 126 aa4.9□□□□□ -1.63
CNOT2-208ENST00000548021 OXTP01178 125 aa4.9□□□□□ -1.63
CNOT2-208ENST00000548021 SMR3BP02814 79 aaPredicted RBP4.9□□□□□ -1.63
CNOT2-208ENST00000548021 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.63
CNOT2-208ENST00000548021 H0Y9P7 68 aa4.89□□□□□ -1.63
CNOT2-208ENST00000548021 PLA2G1BP04054 148 aaKnown RBP4.88□□□□□ -1.63
CNOT2-208ENST00000548021 ATP5EP56381 51 aaPredicted RBP4.88□□□□□ -1.63
CNOT2-208ENST00000548021 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
CNOT2-208ENST00000548021 C1orf195Q5TG92 126 aa4.88□□□□□ -1.63
CNOT2-208ENST00000548021 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
CNOT2-208ENST00000548021 TYMSOSQ8TAI1 123 aa4.87□□□□□ -1.63
CNOT2-208ENST00000548021 MRPL34Q9BQ48 92 aaKnown RBP4.87□□□□□ -1.63
CNOT2-208ENST00000548021 TRAV22A0A0B4J277 110 aa4.86□□□□□ -1.63
CNOT2-208ENST00000548021 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
CNOT2-208ENST00000548021 C8orf87E5RJ46 101 aa4.86□□□□□ -1.63
CNOT2-208ENST00000548021 H3BPC8 53 aa4.86□□□□□ -1.63
CNOT2-208ENST00000548021 MP68P56378 58 aa4.86□□□□□ -1.63
CNOT2-208ENST00000548021 PRR26Q8N8Z3 221 aa4.86□□□□□ -1.63
CNOT2-208ENST00000548021 LIMD2Q9BT23 127 aa4.86□□□□□ -1.63
CNOT2-208ENST00000548021 LINC00208Q96KT6 92 aa4.85□□□□□ -1.63
CNOT2-208ENST00000548021 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
CNOT2-208ENST00000548021 KMT2CQ8NEZ4 4911 aaKnown RBP4.84□□□□□ -1.63
CNOT2-208ENST00000548021 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
CNOT2-208ENST00000548021 SPINK1P00995 79 aa4.83□□□□□ -1.64
CNOT2-208ENST00000548021 LINC00304Q8N9R0 145 aa4.83□□□□□ -1.64
CNOT2-208ENST00000548021 NDUFS5O43920 106 aa4.82□□□□□ -1.64
CNOT2-208ENST00000548021 KRTAP13-3Q3SY46 172 aa4.82□□□□□ -1.64
CNOT2-208ENST00000548021 KRTAP16-1A8MUX0 517 aa4.81□□□□□ -1.64
CNOT2-208ENST00000548021 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
CNOT2-208ENST00000548021 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
CNOT2-208ENST00000548021 LINC00313P59037 77 aa4.8□□□□□ -1.64
CNOT2-208ENST00000548021 FAT1Q14517 4588 aa4.79□□□□□ -1.64
CNOT2-208ENST00000548021 CYP4F30PQ9H0H9 118 aa4.79□□□□□ -1.64
CNOT2-208ENST00000548021 Q5W150 140 aa4.78□□□□□ -1.64
CNOT2-208ENST00000548021 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
CNOT2-208ENST00000548021 Q8N9P0 234 aaPredicted RBP4.78□□□□□ -1.64
CNOT2-208ENST00000548021 SPANXA2-OT1Q8N9U9 137 aa4.77□□□□□ -1.65
CNOT2-208ENST00000548021 PRR4Q16378 134 aa4.76□□□□□ -1.65
CNOT2-208ENST00000548021 HSPG2P98160 4391 aa4.75□□□□□ -1.65
CNOT2-208ENST00000548021 RYR3Q15413 4870 aa4.75□□□□□ -1.65
CNOT2-208ENST00000548021 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
CNOT2-208ENST00000548021 PCOTHQ58A44 107 aa4.74□□□□□ -1.65
CNOT2-208ENST00000548021 Q5VSD8 79 aa4.74□□□□□ -1.65
CNOT2-208ENST00000548021 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
CNOT2-208ENST00000548021 RYR1P21817 5038 aa4.73□□□□□ -1.65
CNOT2-208ENST00000548021 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
CNOT2-208ENST00000548021 FP248Q71RG6 208 aaPredicted RBP4.73□□□□□ -1.65
CNOT2-208ENST00000548021 IGLV7-46A0A075B6I9 117 aa4.72□□□□□ -1.65
CNOT2-208ENST00000548021 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
CNOT2-208ENST00000548021 RETNLBQ9BQ08 111 aa4.71□□□□□ -1.66
CNOT2-208ENST00000548021 TNXBP22105 4242 aa4.69□□□□□ -1.66
CNOT2-208ENST00000548021 FLG2Q5D862 2391 aaPredicted RBP4.69□□□□□ -1.66
CNOT2-208ENST00000548021 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
CNOT2-208ENST00000548021 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
CNOT2-208ENST00000548021 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
CNOT2-208ENST00000548021 Q8N1X5 172 aa4.68□□□□□ -1.66
CNOT2-208ENST00000548021 C4orf26Q17RF5 130 aa4.67□□□□□ -1.66
CNOT2-208ENST00000548021 COA5Q86WW8 74 aa4.66□□□□□ -1.66
CNOT2-208ENST00000548021 FAT3Q8TDW7 4589 aa4.66□□□□□ -1.66
CNOT2-208ENST00000548021 C9orf92A6NGG3 77 aa4.65□□□□□ -1.67
CNOT2-208ENST00000548021 A8MUU9 505 aa4.65□□□□□ -1.67
CNOT2-208ENST00000548021 HRES1P13985 223 aa4.64□□□□□ -1.67
CNOT2-208ENST00000548021 C20orf166-AS1Q96NR2 134 aa4.64□□□□□ -1.67
CNOT2-208ENST00000548021 MPLKIPQ8TAP9 179 aa4.63□□□□□ -1.67
CNOT2-208ENST00000548021 LRP1Q07954 4544 aaKnown RBP4.62□□□□□ -1.67
CNOT2-208ENST00000548021 IGKV2D-30A0A075B6S6 120 aa4.62□□□□□ -1.67
CNOT2-208ENST00000548021 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
CNOT2-208ENST00000548021 DMAC1Q96GE9 116 aa4.61□□□□□ -1.67
CNOT2-208ENST00000548021 KIAA1109Q2LD37 5005 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms