RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 DEFB116Q30KQ4 102 aa5.7□□□□□ -1.5
GCN1-202ENST00000547263 VPS25Q9BRG1 176 aa5.7□□□□□ -1.5
GCN1-202ENST00000547263 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
GCN1-202ENST00000547263 C8orf87E5RJ46 101 aa5.69□□□□□ -1.5
GCN1-202ENST00000547263 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
GCN1-202ENST00000547263 MT1HP80294 61 aa5.68□□□□□ -1.5
GCN1-202ENST00000547263 COL5A1-AS1Q5SY13 56 aa5.68□□□□□ -1.5
GCN1-202ENST00000547263 SMCPP49901 116 aaPredicted RBP5.67□□□□□ -1.5
GCN1-202ENST00000547263 PRO0461Q9UI25 63 aa5.67□□□□□ -1.5
GCN1-202ENST00000547263 SPCS1Q9Y6A9 102 aa5.67□□□□□ -1.5
GCN1-202ENST00000547263 IGHV6-1A0A0B4J1U7 121 aa5.65□□□□□ -1.5
GCN1-202ENST00000547263 MTURNQ8N3F0 131 aa5.65□□□□□ -1.5
GCN1-202ENST00000547263 A8MWP4 228 aa5.64□□□□□ -1.51
GCN1-202ENST00000547263 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
GCN1-202ENST00000547263 IGKV3D-7A0A0C4DH55 119 aa5.62□□□□□ -1.51
GCN1-202ENST00000547263 K7EP34 96 aa5.62□□□□□ -1.51
GCN1-202ENST00000547263 NREPQ16612 68 aa5.6□□□□□ -1.51
GCN1-202ENST00000547263 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
GCN1-202ENST00000547263 MPLKIPQ8TAP9 179 aa5.6□□□□□ -1.51
GCN1-202ENST00000547263 NDUFB1O75438 58 aa5.59□□□□□ -1.51
GCN1-202ENST00000547263 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
GCN1-202ENST00000547263 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
GCN1-202ENST00000547263 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
GCN1-202ENST00000547263 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
GCN1-202ENST00000547263 MMP24-AS1A0A0U1RRL7 71 aa5.56□□□□□ -1.52
GCN1-202ENST00000547263 HRES1P13985 223 aa5.56□□□□□ -1.52
GCN1-202ENST00000547263 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
GCN1-202ENST00000547263 Q6ZVQ6 151 aa5.55□□□□□ -1.52
GCN1-202ENST00000547263 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
GCN1-202ENST00000547263 PCP4L1A6NKN8 68 aa5.54□□□□□ -1.52
GCN1-202ENST00000547263 K7EQZ3 153 aa5.54□□□□□ -1.52
GCN1-202ENST00000547263 LCE2DQ5TA82 110 aaPredicted RBP5.54□□□□□ -1.52
GCN1-202ENST00000547263 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
GCN1-202ENST00000547263 GTF2H5Q6ZYL4 71 aa5.53□□□□□ -1.52
GCN1-202ENST00000547263 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
GCN1-202ENST00000547263 F8W1H4 67 aa5.52□□□□□ -1.53
GCN1-202ENST00000547263 MRPL34Q9BQ48 92 aaKnown RBP5.51□□□□□ -1.53
GCN1-202ENST00000547263 LINC00846Q9NV44 126 aa5.51□□□□□ -1.53
GCN1-202ENST00000547263 BPY2O14599 106 aa5.5□□□□□ -1.53
GCN1-202ENST00000547263 hDV103S1A0JD37 113 aa5.48□□□□□ -1.53
GCN1-202ENST00000547263 SPINK7P58062 85 aa5.48□□□□□ -1.53
GCN1-202ENST00000547263 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
GCN1-202ENST00000547263 UBL5Q9BZL1 73 aa5.45□□□□□ -1.54
GCN1-202ENST00000547263 M0R2T5 61 aa5.44□□□□□ -1.54
GCN1-202ENST00000547263 Q8N9L7 120 aa5.44□□□□□ -1.54
GCN1-202ENST00000547263 RBM12B-AS1Q9P1G2 102 aa5.44□□□□□ -1.54
GCN1-202ENST00000547263 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
GCN1-202ENST00000547263 CXCL6P80162 114 aa5.41□□□□□ -1.54
GCN1-202ENST00000547263 Q5W150 140 aa5.41□□□□□ -1.54
GCN1-202ENST00000547263 CASC2Q6XLA1 102 aa5.41□□□□□ -1.54
GCN1-202ENST00000547263 WFDC13Q8IUB5 93 aa5.39□□□□□ -1.55
GCN1-202ENST00000547263 FAM240AA0A1B0GVK7 77 aa5.38□□□□□ -1.55
GCN1-202ENST00000547263 HCG22E2RYF7 251 aa5.38□□□□□ -1.55
GCN1-202ENST00000547263 FAM236DA0A1B0GTK5 79 aa5.37□□□□□ -1.55
GCN1-202ENST00000547263 FAM236CP0DP71 79 aa5.37□□□□□ -1.55
GCN1-202ENST00000547263 ACYP1P07311 99 aa5.36□□□□□ -1.55
GCN1-202ENST00000547263 NDUFS5O43920 106 aa5.35□□□□□ -1.55
GCN1-202ENST00000547263 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
GCN1-202ENST00000547263 MT2AP02795 61 aa5.33□□□□□ -1.56
GCN1-202ENST00000547263 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
GCN1-202ENST00000547263 A0A1B0GV90 55 aa5.31□□□□□ -1.56
GCN1-202ENST00000547263 ATP5EP2Q5VTU8 51 aa5.3□□□□□ -1.56
GCN1-202ENST00000547263 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
GCN1-202ENST00000547263 MT1FP04733 61 aa5.29□□□□□ -1.56
GCN1-202ENST00000547263 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
GCN1-202ENST00000547263 IGKV2D-30A0A075B6S6 120 aa5.28□□□□□ -1.56
GCN1-202ENST00000547263 H1FX-AS1Q4G0G2 97 aa5.28□□□□□ -1.56
GCN1-202ENST00000547263 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
GCN1-202ENST00000547263 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
GCN1-202ENST00000547263 LINC00643Q86TS7 51 aa5.23□□□□□ -1.57
GCN1-202ENST00000547263 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
GCN1-202ENST00000547263 C4orf26Q17RF5 130 aa5.22□□□□□ -1.57
GCN1-202ENST00000547263 LCE2BO14633 110 aa5.19□□□□□ -1.58
GCN1-202ENST00000547263 TRAV22A0A0B4J277 110 aa5.18□□□□□ -1.58
GCN1-202ENST00000547263 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
GCN1-202ENST00000547263 CYP4F30PQ9H0H9 118 aa5.18□□□□□ -1.58
GCN1-202ENST00000547263 UQCRQO14949 82 aa5.16□□□□□ -1.58
GCN1-202ENST00000547263 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.58
GCN1-202ENST00000547263 A0A087WVE0 104 aa5.15□□□□□ -1.59
GCN1-202ENST00000547263 LOC101927531A0A1B0GV80 90 aa5.15□□□□□ -1.59
GCN1-202ENST00000547263 HIST1H4AP62805 103 aaKnown RBP5.15□□□□□ -1.59
GCN1-202ENST00000547263 C1orf64Q8NEQ6 169 aa5.14□□□□□ -1.59
GCN1-202ENST00000547263 J3QR89 54 aa5.12□□□□□ -1.59
GCN1-202ENST00000547263 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
GCN1-202ENST00000547263 ATOX1O00244 68 aa5.1□□□□□ -1.59
GCN1-202ENST00000547263 H0Y9P7 68 aa5.09□□□□□ -1.59
GCN1-202ENST00000547263 KRTAP3-3Q9BYR6 98 aa5.09□□□□□ -1.59
GCN1-202ENST00000547263 LCA10Q71F78 164 aa5.08□□□□□ -1.6
GCN1-202ENST00000547263 S4R3F8 94 aa5.08□□□□□ -1.6
GCN1-202ENST00000547263 USH2AO75445 5202 aa5.05□□□□□ -1.6
GCN1-202ENST00000547263 C5orf47Q569G3 176 aa5.04□□□□□ -1.6
GCN1-202ENST00000547263 CSAG1Q6PB30 78 aa5.04□□□□□ -1.6
GCN1-202ENST00000547263 IMUPQ9GZP8 106 aa5.04□□□□□ -1.6
GCN1-202ENST00000547263 KRTAP19-1Q8IUB9 90 aa5.02□□□□□ -1.61
GCN1-202ENST00000547263 H3BPC8 53 aa5.01□□□□□ -1.61
GCN1-202ENST00000547263 KLKP1Q107X0 134 aa5.01□□□□□ -1.61
GCN1-202ENST00000547263 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
GCN1-202ENST00000547263 LINC00208Q96KT6 92 aa5.01□□□□□ -1.61
GCN1-202ENST00000547263 A8MUN3 132 aa5□□□□□ -1.61
GCN1-202ENST00000547263 K7ERU9 68 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms