RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 IGHV6-1A0A0B4J1U7 121 aa7.23□□□□□ -1.25
COL2A1-209ENST00000546974 FAM236DA0A1B0GTK5 79 aa7.22□□□□□ -1.25
COL2A1-209ENST00000546974 FAM236CP0DP71 79 aa7.22□□□□□ -1.25
COL2A1-209ENST00000546974 MPLKIPQ8TAP9 179 aa7.22□□□□□ -1.25
COL2A1-209ENST00000546974 SSPOA2VEC9 5147 aa7.21□□□□□ -1.25
COL2A1-209ENST00000546974 A0A1W2PPM0 123 aa7.21□□□□□ -1.26
COL2A1-209ENST00000546974 HRES1P13985 223 aa7.21□□□□□ -1.26
COL2A1-209ENST00000546974 RBM3P98179 157 aaKnown RBP7.21□□□□□ -1.26
COL2A1-209ENST00000546974 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
COL2A1-209ENST00000546974 C8orf87E5RJ46 101 aa7.2□□□□□ -1.26
COL2A1-209ENST00000546974 SCGB1C2P0DMR2 95 aa7.2□□□□□ -1.26
COL2A1-209ENST00000546974 DSCR8Q96T75 97 aa7.19□□□□□ -1.26
COL2A1-209ENST00000546974 VPS25Q9BRG1 176 aa7.19□□□□□ -1.26
COL2A1-209ENST00000546974 A0A1B0GVX0 72 aa7.18□□□□□ -1.26
COL2A1-209ENST00000546974 C21orf62-AS1Q17RA5 79 aa7.16□□□□□ -1.26
COL2A1-209ENST00000546974 LYRM7Q5U5X0 104 aa7.16□□□□□ -1.26
COL2A1-209ENST00000546974 J3KT08 172 aa7.15□□□□□ -1.26
COL2A1-209ENST00000546974 ATXN8Q156A1 80 aa7.15□□□□□ -1.26
COL2A1-209ENST00000546974 C9JAW5 83 aa7.14□□□□□ -1.27
COL2A1-209ENST00000546974 MT2AP02795 61 aa7.14□□□□□ -1.27
COL2A1-209ENST00000546974 BAALC-AS2P0C853 105 aa7.14□□□□□ -1.27
COL2A1-209ENST00000546974 Q6ZQT0 140 aa7.12□□□□□ -1.27
COL2A1-209ENST00000546974 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
COL2A1-209ENST00000546974 MTURNQ8N3F0 131 aa7.11□□□□□ -1.27
COL2A1-209ENST00000546974 K7EP34 96 aa7.1□□□□□ -1.27
COL2A1-209ENST00000546974 SPCS1Q9Y6A9 102 aa7.1□□□□□ -1.27
COL2A1-209ENST00000546974 NDUFB1O75438 58 aa7.09□□□□□ -1.27
COL2A1-209ENST00000546974 PRO0461Q9UI25 63 aa7.09□□□□□ -1.27
COL2A1-209ENST00000546974 MT1FP04733 61 aa7.08□□□□□ -1.28
COL2A1-209ENST00000546974 Q8N9P0 234 aaPredicted RBP7.08□□□□□ -1.28
COL2A1-209ENST00000546974 A0A1B0GW54 56 aa7.07□□□□□ -1.28
COL2A1-209ENST00000546974 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
COL2A1-209ENST00000546974 SPINK7P58062 85 aa7.07□□□□□ -1.28
COL2A1-209ENST00000546974 FCGBPQ9Y6R7 5405 aaPredicted RBP7.06□□□□□ -1.28
COL2A1-209ENST00000546974 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.06□□□□□ -1.28
COL2A1-209ENST00000546974 JMJD7-PLA2G4BH0Y9G9 81 aa7.06□□□□□ -1.28
COL2A1-209ENST00000546974 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
COL2A1-209ENST00000546974 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
COL2A1-209ENST00000546974 LOC110117498A0A087WWA1 95 aa7.04□□□□□ -1.28
COL2A1-209ENST00000546974 A8MWP4 228 aa7.04□□□□□ -1.28
COL2A1-209ENST00000546974 H3BT86 120 aa7.04□□□□□ -1.28
COL2A1-209ENST00000546974 LCE2BO14633 110 aa7.04□□□□□ -1.28
COL2A1-209ENST00000546974 PDE6GP18545 87 aa7.03□□□□□ -1.28
COL2A1-209ENST00000546974 C8orf17Q9NRJ1 99 aa7.03□□□□□ -1.28
COL2A1-209ENST00000546974 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
COL2A1-209ENST00000546974 GTF2H5Q6ZYL4 71 aa7.01□□□□□ -1.29
COL2A1-209ENST00000546974 IGKV3D-7A0A0C4DH55 119 aa7□□□□□ -1.29
COL2A1-209ENST00000546974 A0A1B0GV90 55 aa6.98□□□□□ -1.29
COL2A1-209ENST00000546974 Q6ZVQ6 151 aa6.98□□□□□ -1.29
COL2A1-209ENST00000546974 KRTAP19-1Q8IUB9 90 aa6.98□□□□□ -1.29
COL2A1-209ENST00000546974 WFDC13Q8IUB5 93 aa6.97□□□□□ -1.29
COL2A1-209ENST00000546974 C14orf132Q9NPU4 83 aa6.97□□□□□ -1.29
COL2A1-209ENST00000546974 F8W1H4 67 aa6.96□□□□□ -1.3
COL2A1-209ENST00000546974 PRR15Q8IV56 129 aa6.96□□□□□ -1.3
COL2A1-209ENST00000546974 NREPQ16612 68 aa6.95□□□□□ -1.3
COL2A1-209ENST00000546974 TMEM254Q8TBM7 123 aa6.92□□□□□ -1.3
COL2A1-209ENST00000546974 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
COL2A1-209ENST00000546974 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
COL2A1-209ENST00000546974 hDV103S1A0JD37 113 aa6.87□□□□□ -1.31
COL2A1-209ENST00000546974 ETDBQ3ZM63 59 aa6.87□□□□□ -1.31
COL2A1-209ENST00000546974 LINC00846Q9NV44 126 aa6.86□□□□□ -1.31
COL2A1-209ENST00000546974 K7EQZ3 153 aa6.85□□□□□ -1.31
COL2A1-209ENST00000546974 NDUFS5O43920 106 aa6.84□□□□□ -1.31
COL2A1-209ENST00000546974 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
COL2A1-209ENST00000546974 KRTAP19-6Q3LI70 58 aa6.83□□□□□ -1.32
COL2A1-209ENST00000546974 BPY2O14599 106 aa6.8□□□□□ -1.32
COL2A1-209ENST00000546974 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
COL2A1-209ENST00000546974 IGKV2D-30A0A075B6S6 120 aa6.78□□□□□ -1.32
COL2A1-209ENST00000546974 IGKV2-30P06310 120 aa6.78□□□□□ -1.32
COL2A1-209ENST00000546974 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
COL2A1-209ENST00000546974 Q5W150 140 aa6.77□□□□□ -1.33
COL2A1-209ENST00000546974 FAM240AA0A1B0GVK7 77 aa6.73□□□□□ -1.33
COL2A1-209ENST00000546974 CASC2Q6XLA1 102 aa6.73□□□□□ -1.33
COL2A1-209ENST00000546974 Q8N9L7 120 aa6.72□□□□□ -1.33
COL2A1-209ENST00000546974 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
COL2A1-209ENST00000546974 HCG22E2RYF7 251 aa6.71□□□□□ -1.34
COL2A1-209ENST00000546974 CXCL6P80162 114 aa6.69□□□□□ -1.34
COL2A1-209ENST00000546974 ACYP1P07311 99 aa6.68□□□□□ -1.34
COL2A1-209ENST00000546974 C4orf26Q17RF5 130 aa6.67□□□□□ -1.34
COL2A1-209ENST00000546974 UBL5Q9BZL1 73 aa6.65□□□□□ -1.34
COL2A1-209ENST00000546974 C5orf47Q569G3 176 aa6.59□□□□□ -1.35
COL2A1-209ENST00000546974 KRTAP3-1Q9BYR8 98 aa6.59□□□□□ -1.35
COL2A1-209ENST00000546974 J3QR89 54 aa6.58□□□□□ -1.36
COL2A1-209ENST00000546974 KRTAP6-3Q3LI67 103 aa6.57□□□□□ -1.36
COL2A1-209ENST00000546974 S4R3F8 94 aa6.57□□□□□ -1.36
COL2A1-209ENST00000546974 LINC00643Q86TS7 51 aa6.56□□□□□ -1.36
COL2A1-209ENST00000546974 FAM236AA0A1B0GUQ0 79 aa6.55□□□□□ -1.36
COL2A1-209ENST00000546974 FAM236BA0A1B0GV22 79 aa6.55□□□□□ -1.36
COL2A1-209ENST00000546974 ATP5EP2Q5VTU8 51 aa6.55□□□□□ -1.36
COL2A1-209ENST00000546974 C1orf64Q8NEQ6 169 aa6.55□□□□□ -1.36
COL2A1-209ENST00000546974 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
COL2A1-209ENST00000546974 TP53AIP1Q9HCN2 124 aa6.54□□□□□ -1.36
COL2A1-209ENST00000546974 K7ERU9 68 aa6.53□□□□□ -1.36
COL2A1-209ENST00000546974 LCA10Q71F78 164 aa6.51□□□□□ -1.37
COL2A1-209ENST00000546974 MT1BP07438 61 aa6.48□□□□□ -1.37
COL2A1-209ENST00000546974 Q5VV11 94 aa6.48□□□□□ -1.37
COL2A1-209ENST00000546974 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
COL2A1-209ENST00000546974 A6NN06 94 aa6.46□□□□□ -1.38
COL2A1-209ENST00000546974 KRTAP19-8Q3LI54 63 aa6.46□□□□□ -1.38
COL2A1-209ENST00000546974 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms