RNA–Protein interactions for RNA: ENST00000545869.5

PDCD2-214, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-214ENST00000545869 LINC00472Q9H8W2 130 aa13.07□□□□□ -0.32
PDCD2-214ENST00000545869 SEC61BP60468 96 aaKnown RBP13.06□□□□□ -0.32
PDCD2-214ENST00000545869 NREPQ16612 68 aa13.01□□□□□ -0.33
PDCD2-214ENST00000545869 KRTAP19-2Q3LHN2 52 aa13□□□□□ -0.33
PDCD2-214ENST00000545869 SIGMAR1Q99720 223 aa13□□□□□ -0.33
PDCD2-214ENST00000545869 IGKV4-1P06312 121 aa12.99□□□□□ -0.33
PDCD2-214ENST00000545869 DEFB116Q30KQ4 102 aa12.98□□□□□ -0.33
PDCD2-214ENST00000545869 XP32Q5T750 250 aa12.98□□□□□ -0.33
PDCD2-214ENST00000545869 J3KT08 172 aa12.97□□□□□ -0.33
PDCD2-214ENST00000545869 LINC00846Q9NV44 126 aa12.95□□□□□ -0.34
PDCD2-214ENST00000545869 Q6ZVQ6 151 aa12.92□□□□□ -0.34
PDCD2-214ENST00000545869 UBL5Q9BZL1 73 aa12.91□□□□□ -0.34
PDCD2-214ENST00000545869 C9orf92A6NGG3 77 aa12.89□□□□□ -0.35
PDCD2-214ENST00000545869 MT1HP80294 61 aa12.89□□□□□ -0.35
PDCD2-214ENST00000545869 FAM240AA0A1B0GVK7 77 aa12.88□□□□□ -0.35
PDCD2-214ENST00000545869 ACYP1P07311 99 aa12.88□□□□□ -0.35
PDCD2-214ENST00000545869 A0A1B0GVX0 72 aa12.83□□□□□ -0.36
PDCD2-214ENST00000545869 A8MWP4 228 aa12.83□□□□□ -0.36
PDCD2-214ENST00000545869 BPY2O14599 106 aa12.83□□□□□ -0.36
PDCD2-214ENST00000545869 NDUFB1O75438 58 aa12.83□□□□□ -0.36
PDCD2-214ENST00000545869 IGHV6-1A0A0B4J1U7 121 aa12.81□□□□□ -0.36
PDCD2-214ENST00000545869 DSCR10P59022 87 aa12.8□□□□□ -0.36
PDCD2-214ENST00000545869 IGKV3D-7A0A0C4DH55 119 aa12.78□□□□□ -0.36
PDCD2-214ENST00000545869 J3QR89 54 aa12.78□□□□□ -0.36
PDCD2-214ENST00000545869 PCOTHQ58A44 107 aa12.78□□□□□ -0.36
PDCD2-214ENST00000545869 C8orf87E5RJ46 101 aa12.77□□□□□ -0.37
PDCD2-214ENST00000545869 LINC00313P59037 77 aa12.77□□□□□ -0.37
PDCD2-214ENST00000545869 LORP23490 312 aaPredicted RBP12.75□□□□□ -0.37
PDCD2-214ENST00000545869 PRR15Q8IV56 129 aa12.75□□□□□ -0.37
PDCD2-214ENST00000545869 K7EQZ3 153 aa12.72□□□□□ -0.37
PDCD2-214ENST00000545869 NOTCH2NLQ7Z3S9 236 aa12.72□□□□□ -0.37
PDCD2-214ENST00000545869 KRTAP10-6P60371 365 aaPredicted RBP12.71□□□□□ -0.37
PDCD2-214ENST00000545869 CXCL6P80162 114 aa12.69□□□□□ -0.38
PDCD2-214ENST00000545869 C8orf17Q9NRJ1 99 aa12.69□□□□□ -0.38
PDCD2-214ENST00000545869 KRTAP16-1A8MUX0 517 aa12.68□□□□□ -0.38
PDCD2-214ENST00000545869 FLGP20930 4061 aaPredicted RBP12.67□□□□□ -0.38
PDCD2-214ENST00000545869 RPL37P61927 97 aaKnown RBP12.66□□□□□ -0.38
PDCD2-214ENST00000545869 Q8N9L7 120 aa12.66□□□□□ -0.38
PDCD2-214ENST00000545869 ATP5EP2Q5VTU8 51 aa12.64□□□□□ -0.39
PDCD2-214ENST00000545869 Q75L30 129 aa12.64□□□□□ -0.39
PDCD2-214ENST00000545869 C20orf166-AS1Q96NR2 134 aa12.64□□□□□ -0.39
PDCD2-214ENST00000545869 MMP24-AS1A0A0U1RRL7 71 aa12.62□□□□□ -0.39
PDCD2-214ENST00000545869 A8MUU9 505 aa12.62□□□□□ -0.39
PDCD2-214ENST00000545869 K7ERU9 68 aa12.62□□□□□ -0.39
PDCD2-214ENST00000545869 LINC00643Q86TS7 51 aa12.61□□□□□ -0.39
PDCD2-214ENST00000545869 TMEM254Q8TBM7 123 aa12.55□□□□□ -0.4
PDCD2-214ENST00000545869 hDV103S1A0JD37 113 aa12.54□□□□□ -0.4
PDCD2-214ENST00000545869 Q8N9P0 234 aaPredicted RBP12.51□□□□□ -0.41
PDCD2-214ENST00000545869 MRPL34Q9BQ48 92 aaKnown RBP12.51□□□□□ -0.41
PDCD2-214ENST00000545869 CASC2Q6XLA1 102 aa12.5□□□□□ -0.41
PDCD2-214ENST00000545869 ATP11AUNQ6ZP68 121 aa12.5□□□□□ -0.41
PDCD2-214ENST00000545869 HCG22E2RYF7 251 aa12.49□□□□□ -0.41
PDCD2-214ENST00000545869 WFDC13Q8IUB5 93 aa12.49□□□□□ -0.41
PDCD2-214ENST00000545869 M0R2T5 61 aa12.48□□□□□ -0.41
PDCD2-214ENST00000545869 HIST1H4AP62805 103 aaKnown RBP12.43□□□□□ -0.42
PDCD2-214ENST00000545869 COX6B2Q6YFQ2 88 aa12.4□□□□□ -0.42
PDCD2-214ENST00000545869 NDUFS5O43920 106 aa12.37□□□□□ -0.43
PDCD2-214ENST00000545869 ZCCHC13Q8WW36 166 aaKnown RBP12.36□□□□□ -0.43
PDCD2-214ENST00000545869 A0A087WVE0 104 aa12.31□□□□□ -0.44
PDCD2-214ENST00000545869 SSPOA2VEC9 5147 aa12.3□□□□□ -0.44
PDCD2-214ENST00000545869 USH2AO75445 5202 aa12.28□□□□□ -0.44
PDCD2-214ENST00000545869 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.27□□□□□ -0.45
PDCD2-214ENST00000545869 MT-ATP8P03928 68 aa12.27□□□□□ -0.45
PDCD2-214ENST00000545869 KRTAP9-7A8MTY7 169 aa12.25□□□□□ -0.45
PDCD2-214ENST00000545869 IMUPQ9GZP8 106 aa12.25□□□□□ -0.45
PDCD2-214ENST00000545869 TP53AIP1Q9HCN2 124 aa12.23□□□□□ -0.45
PDCD2-214ENST00000545869 Q5W150 140 aa12.18□□□□□ -0.46
PDCD2-214ENST00000545869 KRTAP9-8Q9BYQ0 159 aa12.13□□□□□ -0.47
PDCD2-214ENST00000545869 SPINK7P58062 85 aa12.11□□□□□ -0.47
PDCD2-214ENST00000545869 UQCRQO14949 82 aa12.07□□□□□ -0.48
PDCD2-214ENST00000545869 FCGBPQ9Y6R7 5405 aaPredicted RBP12.05□□□□□ -0.48
PDCD2-214ENST00000545869 OCR1Q9BZK8 76 aa12.04□□□□□ -0.48
PDCD2-214ENST00000545869 TRAV22A0A0B4J277 110 aa12.03□□□□□ -0.48
PDCD2-214ENST00000545869 SCGB1A1P11684 91 aa12.03□□□□□ -0.48
PDCD2-214ENST00000545869 IGKV2D-30A0A075B6S6 120 aa12.02□□□□□ -0.49
PDCD2-214ENST00000545869 IGKV2-30P06310 120 aa12.02□□□□□ -0.49
PDCD2-214ENST00000545869 HRES1P13985 223 aa12.02□□□□□ -0.49
PDCD2-214ENST00000545869 C7orf65Q6ZTY9 151 aa12.02□□□□□ -0.49
PDCD2-214ENST00000545869 FAM236AA0A1B0GUQ0 79 aa12.01□□□□□ -0.49
PDCD2-214ENST00000545869 FAM236BA0A1B0GV22 79 aa12.01□□□□□ -0.49
PDCD2-214ENST00000545869 MPLKIPQ8TAP9 179 aa11.97□□□□□ -0.49
PDCD2-214ENST00000545869 H0Y9P7 68 aa11.95□□□□□ -0.5
PDCD2-214ENST00000545869 ATOX1O00244 68 aa11.94□□□□□ -0.5
PDCD2-214ENST00000545869 RBM12B-AS1Q9P1G2 102 aa11.92□□□□□ -0.5
PDCD2-214ENST00000545869 LOC101927531A0A1B0GV80 90 aa11.9□□□□□ -0.5
PDCD2-214ENST00000545869 MT2AP02795 61 aa11.9□□□□□ -0.5
PDCD2-214ENST00000545869 SMIM20Q8N5G0 67 aa11.9□□□□□ -0.5
PDCD2-214ENST00000545869 C5orf47Q569G3 176 aa11.88□□□□□ -0.51
PDCD2-214ENST00000545869 MP68P56378 58 aa11.87□□□□□ -0.51
PDCD2-214ENST00000545869 LCE2BO14633 110 aa11.86□□□□□ -0.51
PDCD2-214ENST00000545869 KRTAP19-1Q8IUB9 90 aa11.85□□□□□ -0.51
PDCD2-214ENST00000545869 TRAV7A0A075B6U4 112 aa11.84□□□□□ -0.51
PDCD2-214ENST00000545869 CYP4F30PQ9H0H9 118 aa11.84□□□□□ -0.51
PDCD2-214ENST00000545869 FAM236DA0A1B0GTK5 79 aa11.83□□□□□ -0.52
PDCD2-214ENST00000545869 FAM236CP0DP71 79 aa11.83□□□□□ -0.52
PDCD2-214ENST00000545869 MT1FP04733 61 aa11.82□□□□□ -0.52
PDCD2-214ENST00000545869 C1orf64Q8NEQ6 169 aa11.82□□□□□ -0.52
PDCD2-214ENST00000545869 LINC00208Q96KT6 92 aa11.81□□□□□ -0.52
PDCD2-214ENST00000545869 H3BPC8 53 aa11.8□□□□□ -0.52
PDCD2-214ENST00000545869 MACF1Q9UPN3 7388 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms