RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 LINC00308Q8TCZ7 52 aa1.85□□□□□ -2.11
SNHG1-220ENST00000544550 A0A1W2PNM2 257 aa1.84□□□□□ -2.11
SNHG1-220ENST00000544550 COLCA2A8K830 154 aa1.84□□□□□ -2.11
SNHG1-220ENST00000544550 PSPHP1O15172 72 aa1.84□□□□□ -2.11
SNHG1-220ENST00000544550 MT1BP07438 61 aa1.84□□□□□ -2.11
SNHG1-220ENST00000544550 C18orf32Q8TCD1 76 aa1.84□□□□□ -2.11
SNHG1-220ENST00000544550 IMUPQ9GZP8 106 aa1.84□□□□□ -2.11
SNHG1-220ENST00000544550 TIMM17BO60830 172 aa1.83□□□□□ -2.12
SNHG1-220ENST00000544550 SPINK7P58062 85 aa1.83□□□□□ -2.12
SNHG1-220ENST00000544550 PPDPFLQ8WWR9 84 aa1.83□□□□□ -2.12
SNHG1-220ENST00000544550 COPS9Q8WXC6 57 aa1.83□□□□□ -2.12
SNHG1-220ENST00000544550 CHCHD1Q96BP2 118 aaKnown RBP1.83□□□□□ -2.12
SNHG1-220ENST00000544550 SIGMAR1Q99720 223 aa1.83□□□□□ -2.12
SNHG1-220ENST00000544550 FAM236AA0A1B0GUQ0 79 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 FAM236BA0A1B0GV22 79 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 BPY2O14599 106 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 C3orf79P0CE67 100 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 PSMB2P49721 201 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 KRTAP19-8Q3LI54 63 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 Q6ZQY7 126 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 TEN1Q86WV5 123 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 WFDC13Q8IUB5 93 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
SNHG1-220ENST00000544550 A0A087WSZ3 146 aa1.81□□□□□ -2.12
SNHG1-220ENST00000544550 FAM240AA0A1B0GVK7 77 aa1.81□□□□□ -2.12
SNHG1-220ENST00000544550 DPM2O94777 84 aa1.81□□□□□ -2.12
SNHG1-220ENST00000544550 IGKCP01834 107 aa1.81□□□□□ -2.12
SNHG1-220ENST00000544550 H1FX-AS1Q4G0G2 97 aa1.81□□□□□ -2.12
SNHG1-220ENST00000544550 ZCCHC13Q8WW36 166 aaKnown RBP1.81□□□□□ -2.12
SNHG1-220ENST00000544550 TRAPPC1Q9Y5R8 145 aa1.81□□□□□ -2.12
SNHG1-220ENST00000544550 SMIM26A0A096LP01 95 aa1.8□□□□□ -2.12
SNHG1-220ENST00000544550 A0A1B0GVX0 72 aa1.8□□□□□ -2.12
SNHG1-220ENST00000544550 hADV29S1A0JD25 119 aa1.8□□□□□ -2.12
SNHG1-220ENST00000544550 DEFB116Q30KQ4 102 aa1.8□□□□□ -2.12
SNHG1-220ENST00000544550 LINC00575Q6W349 94 aa1.8□□□□□ -2.12
SNHG1-220ENST00000544550 KRTAP8-1Q8IUC2 63 aa1.8□□□□□ -2.12
SNHG1-220ENST00000544550 SNHG12Q9BXW3 62 aa1.8□□□□□ -2.12
SNHG1-220ENST00000544550 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
SNHG1-220ENST00000544550 C8orf87E5RJ46 101 aa1.79□□□□□ -2.12
SNHG1-220ENST00000544550 H3BUT2 72 aa1.79□□□□□ -2.12
SNHG1-220ENST00000544550 LEPROTL1O95214 131 aa1.79□□□□□ -2.12
SNHG1-220ENST00000544550 IGKV4-1P06312 121 aa1.79□□□□□ -2.12
SNHG1-220ENST00000544550 IFITM1P13164 125 aa1.79□□□□□ -2.12
SNHG1-220ENST00000544550 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.79□□□□□ -2.12
SNHG1-220ENST00000544550 SMIM11BQ8TCY0 68 aa1.79□□□□□ -2.12
SNHG1-220ENST00000544550 DSCR8Q96T75 97 aa1.79□□□□□ -2.12
SNHG1-220ENST00000544550 IGHV6-1A0A0B4J1U7 121 aa1.78□□□□□ -2.12
SNHG1-220ENST00000544550 NDUFS5O43920 106 aa1.78□□□□□ -2.12
SNHG1-220ENST00000544550 PRO0628Q9UI54 55 aa1.78□□□□□ -2.12
SNHG1-220ENST00000544550 HSPB8Q9UJY1 196 aa1.78□□□□□ -2.12
SNHG1-220ENST00000544550 C5orf47Q569G3 176 aa1.77□□□□□ -2.13
SNHG1-220ENST00000544550 C12orf57Q99622 126 aa1.77□□□□□ -2.13
SNHG1-220ENST00000544550 PRO2289Q9P1D8 64 aa1.77□□□□□ -2.13
SNHG1-220ENST00000544550 SNCGO76070 127 aa1.76□□□□□ -2.13
SNHG1-220ENST00000544550 TRGC2P03986 189 aa1.76□□□□□ -2.13
SNHG1-220ENST00000544550 BVES-AS1Q5T3Y7 98 aa1.76□□□□□ -2.13
SNHG1-220ENST00000544550 LYRM7Q5U5X0 104 aa1.76□□□□□ -2.13
SNHG1-220ENST00000544550 SCGB1D4Q6XE38 83 aa1.76□□□□□ -2.13
SNHG1-220ENST00000544550 RAB37Q96AX2 223 aa1.76□□□□□ -2.13
SNHG1-220ENST00000544550 PMCHL2Q9BQD1 86 aa1.76□□□□□ -2.13
SNHG1-220ENST00000544550 C8orf17Q9NRJ1 99 aa1.75□□□□□ -2.13
SNHG1-220ENST00000544550 TRBV7-4A0A0J9YYF1 115 aa1.74□□□□□ -2.13
SNHG1-220ENST00000544550 TMEM218A2RU14 115 aa1.74□□□□□ -2.13
SNHG1-220ENST00000544550 H3BMG7 143 aa1.74□□□□□ -2.13
SNHG1-220ENST00000544550 Q5W150 140 aa1.74□□□□□ -2.13
SNHG1-220ENST00000544550 PRO0461Q9UI25 63 aa1.74□□□□□ -2.13
SNHG1-220ENST00000544550 IGKV3D-7A0A0C4DH55 119 aa1.73□□□□□ -2.13
SNHG1-220ENST00000544550 FABP4P15090 132 aa1.73□□□□□ -2.13
SNHG1-220ENST00000544550 KLKP1Q107X0 134 aa1.73□□□□□ -2.13
SNHG1-220ENST00000544550 MUSTN1Q8IVN3 82 aa1.73□□□□□ -2.13
SNHG1-220ENST00000544550 LINC00472Q9H8W2 130 aa1.73□□□□□ -2.13
SNHG1-220ENST00000544550 PRR15Q8IV56 129 aa1.72□□□□□ -2.13
SNHG1-220ENST00000544550 YPEL4Q96NS1 127 aa1.72□□□□□ -2.13
SNHG1-220ENST00000544550 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
SNHG1-220ENST00000544550 J3KT08 172 aa1.71□□□□□ -2.14
SNHG1-220ENST00000544550 NDUFB1O75438 58 aa1.71□□□□□ -2.14
SNHG1-220ENST00000544550 SCGB1C2P0DMR2 95 aa1.71□□□□□ -2.14
SNHG1-220ENST00000544550 CSAG1Q6PB30 78 aa1.71□□□□□ -2.14
SNHG1-220ENST00000544550 TTTY13Q9BZ97 58 aa1.71□□□□□ -2.14
SNHG1-220ENST00000544550 SYS1-DBNDD2H3BUS1 97 aa1.7□□□□□ -2.14
SNHG1-220ENST00000544550 TRACP01848 142 aa1.7□□□□□ -2.14
SNHG1-220ENST00000544550 LUZP6Q538Z0 58 aa1.7□□□□□ -2.14
SNHG1-220ENST00000544550 CLLU1Q5K131 121 aa1.7□□□□□ -2.14
SNHG1-220ENST00000544550 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
SNHG1-220ENST00000544550 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
SNHG1-220ENST00000544550 ANKRD29Q8N6D5 301 aa1.7□□□□□ -2.14
SNHG1-220ENST00000544550 FABP2P12104 132 aa1.69□□□□□ -2.14
SNHG1-220ENST00000544550 LINC01545Q5VT33 79 aa1.69□□□□□ -2.14
SNHG1-220ENST00000544550 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
SNHG1-220ENST00000544550 C2orf91Q6ZV80 131 aa1.69□□□□□ -2.14
SNHG1-220ENST00000544550 LCA10Q71F78 164 aa1.69□□□□□ -2.14
SNHG1-220ENST00000544550 SPANXA2-OT1Q8N9U9 137 aa1.69□□□□□ -2.14
SNHG1-220ENST00000544550 ANAPC13Q9BS18 74 aa1.69□□□□□ -2.14
SNHG1-220ENST00000544550 A0A1B0GX51 115 aa1.68□□□□□ -2.14
SNHG1-220ENST00000544550 H0YGX0 51 aa1.68□□□□□ -2.14
SNHG1-220ENST00000544550 CCKP06307 115 aa1.68□□□□□ -2.14
SNHG1-220ENST00000544550 C7orf65Q6ZTY9 151 aa1.68□□□□□ -2.14
SNHG1-220ENST00000544550 S4R3F8 94 aa1.68□□□□□ -2.14
SNHG1-220ENST00000544550 H3BQ85 93 aa1.67□□□□□ -2.14
SNHG1-220ENST00000544550 K7EQZ3 153 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms