RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 Q5VSD8 79 aa6.4□□□□□ -1.38
SCG3-202ENST00000542355 Q96NJ1 140 aa6.4□□□□□ -1.38
SCG3-202ENST00000542355 EPPK1P58107 5090 aaKnown RBP6.39□□□□□ -1.39
SCG3-202ENST00000542355 NDUFS5O43920 106 aa6.39□□□□□ -1.39
SCG3-202ENST00000542355 HSPG2P98160 4391 aa6.39□□□□□ -1.39
SCG3-202ENST00000542355 J3KT08 172 aa6.38□□□□□ -1.39
SCG3-202ENST00000542355 ATOX1O00244 68 aa6.37□□□□□ -1.39
SCG3-202ENST00000542355 A8MWP4 228 aa6.37□□□□□ -1.39
SCG3-202ENST00000542355 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
SCG3-202ENST00000542355 RYR1P21817 5038 aa6.36□□□□□ -1.39
SCG3-202ENST00000542355 PRR15Q8IV56 129 aa6.35□□□□□ -1.39
SCG3-202ENST00000542355 RBM12B-AS1Q9P1G2 102 aa6.35□□□□□ -1.39
SCG3-202ENST00000542355 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
SCG3-202ENST00000542355 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
SCG3-202ENST00000542355 NDUFB1O75438 58 aa6.34□□□□□ -1.39
SCG3-202ENST00000542355 LINC00304Q8N9R0 145 aa6.34□□□□□ -1.4
SCG3-202ENST00000542355 SPINK1P00995 79 aa6.33□□□□□ -1.4
SCG3-202ENST00000542355 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
SCG3-202ENST00000542355 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
SCG3-202ENST00000542355 Q5XG85 94 aa6.33□□□□□ -1.4
SCG3-202ENST00000542355 LIMD2Q9BT23 127 aa6.32□□□□□ -1.4
SCG3-202ENST00000542355 NOTCH2NLQ7Z3S9 236 aa6.31□□□□□ -1.4
SCG3-202ENST00000542355 Q8N1X5 172 aa6.31□□□□□ -1.4
SCG3-202ENST00000542355 WFDC13Q8IUB5 93 aa6.31□□□□□ -1.4
SCG3-202ENST00000542355 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
SCG3-202ENST00000542355 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
SCG3-202ENST00000542355 A0A1B0GVX0 72 aa6.29□□□□□ -1.4
SCG3-202ENST00000542355 SERP2Q8N6R1 65 aa6.29□□□□□ -1.4
SCG3-202ENST00000542355 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
SCG3-202ENST00000542355 PSPHP1O15172 72 aa6.28□□□□□ -1.4
SCG3-202ENST00000542355 COX7CP15954 63 aa6.28□□□□□ -1.4
SCG3-202ENST00000542355 CASC2Q6XLA1 102 aa6.28□□□□□ -1.4
SCG3-202ENST00000542355 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
SCG3-202ENST00000542355 KRTAP29-1A8MX34 341 aaPredicted RBP6.27□□□□□ -1.41
SCG3-202ENST00000542355 TRAV7A0A075B6U4 112 aa6.26□□□□□ -1.41
SCG3-202ENST00000542355 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
SCG3-202ENST00000542355 C8orf17Q9NRJ1 99 aa6.26□□□□□ -1.41
SCG3-202ENST00000542355 hDV103S1A0JD37 113 aa6.25□□□□□ -1.41
SCG3-202ENST00000542355 UQCRQO14949 82 aa6.25□□□□□ -1.41
SCG3-202ENST00000542355 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
SCG3-202ENST00000542355 LRP1Q07954 4544 aaKnown RBP6.25□□□□□ -1.41
SCG3-202ENST00000542355 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
SCG3-202ENST00000542355 PKHD1L1Q86WI1 4243 aa6.23□□□□□ -1.41
SCG3-202ENST00000542355 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
SCG3-202ENST00000542355 LINC00313P59037 77 aa6.2□□□□□ -1.42
SCG3-202ENST00000542355 C20orf197Q8N268 126 aa6.2□□□□□ -1.42
SCG3-202ENST00000542355 KRTAP4-5Q9BYR2 181 aa6.2□□□□□ -1.42
SCG3-202ENST00000542355 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
SCG3-202ENST00000542355 RETNLBQ9BQ08 111 aa6.18□□□□□ -1.42
SCG3-202ENST00000542355 TMEM254Q8TBM7 123 aa6.17□□□□□ -1.42
SCG3-202ENST00000542355 TNXBP22105 4242 aa6.17□□□□□ -1.42
SCG3-202ENST00000542355 MP68P56378 58 aa6.17□□□□□ -1.42
SCG3-202ENST00000542355 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
SCG3-202ENST00000542355 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
SCG3-202ENST00000542355 FLG2Q5D862 2391 aaPredicted RBP6.16□□□□□ -1.42
SCG3-202ENST00000542355 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
SCG3-202ENST00000542355 MT1HL1P0DM35 61 aa6.15□□□□□ -1.43
SCG3-202ENST00000542355 PRR4Q16378 134 aa6.15□□□□□ -1.43
SCG3-202ENST00000542355 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.43
SCG3-202ENST00000542355 MYCBP2O75592 4640 aa6.15□□□□□ -1.43
SCG3-202ENST00000542355 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
SCG3-202ENST00000542355 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
SCG3-202ENST00000542355 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
SCG3-202ENST00000542355 H0Y9P7 68 aa6.1□□□□□ -1.43
SCG3-202ENST00000542355 C9orf92A6NGG3 77 aa6.1□□□□□ -1.43
SCG3-202ENST00000542355 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
SCG3-202ENST00000542355 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.43
SCG3-202ENST00000542355 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.44
SCG3-202ENST00000542355 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
SCG3-202ENST00000542355 Q5W150 140 aa6.07□□□□□ -1.44
SCG3-202ENST00000542355 DMBT1Q9UGM3 2413 aaPredicted RBP6.07□□□□□ -1.44
SCG3-202ENST00000542355 H7BZZ5 65 aa6.06□□□□□ -1.44
SCG3-202ENST00000542355 C1orf64Q8NEQ6 169 aa6.06□□□□□ -1.44
SCG3-202ENST00000542355 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
SCG3-202ENST00000542355 A8MUN3 132 aa6.04□□□□□ -1.44
SCG3-202ENST00000542355 H3BPC8 53 aa6.04□□□□□ -1.44
SCG3-202ENST00000542355 NDUFC1O43677 76 aa6.04□□□□□ -1.44
SCG3-202ENST00000542355 FP248Q71RG6 208 aaPredicted RBP6.03□□□□□ -1.44
SCG3-202ENST00000542355 ABCA13Q86UQ4 5058 aa6.02□□□□□ -1.45
SCG3-202ENST00000542355 HERC2O95714 4834 aa6.02□□□□□ -1.45
SCG3-202ENST00000542355 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
SCG3-202ENST00000542355 TMEM258P61165 79 aa6.01□□□□□ -1.45
SCG3-202ENST00000542355 KRTAP13-3Q3SY46 172 aa6.01□□□□□ -1.45
SCG3-202ENST00000542355 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
SCG3-202ENST00000542355 A8MUU9 505 aa5.98□□□□□ -1.45
SCG3-202ENST00000542355 PCOTHQ58A44 107 aa5.96□□□□□ -1.46
SCG3-202ENST00000542355 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
SCG3-202ENST00000542355 CYP4F30PQ9H0H9 118 aa5.94□□□□□ -1.46
SCG3-202ENST00000542355 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
SCG3-202ENST00000542355 IGKV2-30P06310 120 aa5.92□□□□□ -1.46
SCG3-202ENST00000542355 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
SCG3-202ENST00000542355 XP32Q5T750 250 aa5.91□□□□□ -1.46
SCG3-202ENST00000542355 ATP5EP56381 51 aaPredicted RBP5.89□□□□□ -1.47
SCG3-202ENST00000542355 SPANXA2-OT1Q8N9U9 137 aa5.88□□□□□ -1.47
SCG3-202ENST00000542355 RPL37P61927 97 aaKnown RBP5.87□□□□□ -1.47
SCG3-202ENST00000542355 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
SCG3-202ENST00000542355 ATP11AUNQ6ZP68 121 aa5.87□□□□□ -1.47
SCG3-202ENST00000542355 HRES1P13985 223 aa5.86□□□□□ -1.47
SCG3-202ENST00000542355 C7orf65Q6ZTY9 151 aa5.86□□□□□ -1.47
SCG3-202ENST00000542355 LCA10Q71F78 164 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms