RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 H0Y9P7 68 aa3.32□□□□□ -1.88
PROM1-220ENST00000540805 PLA2G2DQ9UNK4 145 aa3.32□□□□□ -1.88
PROM1-220ENST00000540805 IGLV1-50A0A075B6I6 118 aa3.31□□□□□ -1.88
PROM1-220ENST00000540805 SPRR1AP35321 89 aa3.31□□□□□ -1.88
PROM1-220ENST00000540805 Q8N9P0 234 aaPredicted RBP3.31□□□□□ -1.88
PROM1-220ENST00000540805 A6NN06 94 aa3.31□□□□□ -1.88
PROM1-220ENST00000540805 Q96NJ1 140 aa3.31□□□□□ -1.88
PROM1-220ENST00000540805 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
PROM1-220ENST00000540805 IGLV5-37A0A075B6J1 123 aa3.3□□□□□ -1.88
PROM1-220ENST00000540805 C9orf92A6NGG3 77 aa3.3□□□□□ -1.88
PROM1-220ENST00000540805 TLX1NBP0CAT3 122 aa3.3□□□□□ -1.88
PROM1-220ENST00000540805 RYR2Q92736 4967 aa3.3□□□□□ -1.88
PROM1-220ENST00000540805 PRR26Q8N8Z3 221 aa3.3□□□□□ -1.88
PROM1-220ENST00000540805 KRTAP3-3Q9BYR6 98 aa3.3□□□□□ -1.88
PROM1-220ENST00000540805 KRTAP3-2Q9BYR7 98 aa3.3□□□□□ -1.88
PROM1-220ENST00000540805 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
PROM1-220ENST00000540805 SPINK7P58062 85 aa3.29□□□□□ -1.88
PROM1-220ENST00000540805 SPAG11AQ6PDA7 123 aa3.29□□□□□ -1.88
PROM1-220ENST00000540805 C9orf163Q8N9P6 203 aa3.29□□□□□ -1.88
PROM1-220ENST00000540805 SPANXA2-OT1Q8N9U9 137 aa3.29□□□□□ -1.88
PROM1-220ENST00000540805 H3BPC8 53 aa3.29□□□□□ -1.88
PROM1-220ENST00000540805 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
PROM1-220ENST00000540805 APLNQ9ULZ1 77 aa3.28□□□□□ -1.88
PROM1-220ENST00000540805 LINC00313P59037 77 aa3.28□□□□□ -1.88
PROM1-220ENST00000540805 ATP11AUNQ6ZP68 121 aa3.28□□□□□ -1.88
PROM1-220ENST00000540805 PSORS1C2Q9UIG4 136 aa3.27□□□□□ -1.89
PROM1-220ENST00000540805 C7orf65Q6ZTY9 151 aa3.27□□□□□ -1.89
PROM1-220ENST00000540805 TGP01266 2768 aa3.27□□□□□ -1.89
PROM1-220ENST00000540805 KRTAP29-1A8MX34 341 aaPredicted RBP3.26□□□□□ -1.89
PROM1-220ENST00000540805 ZNF861PO60384 105 aa3.26□□□□□ -1.89
PROM1-220ENST00000540805 PKD1P98161 4303 aa3.26□□□□□ -1.89
PROM1-220ENST00000540805 DNAH8Q96JB1 4490 aa3.26□□□□□ -1.89
PROM1-220ENST00000540805 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
PROM1-220ENST00000540805 KRTAP7-1Q8IUC3 87 aa3.26□□□□□ -1.89
PROM1-220ENST00000540805 LINC00304Q8N9R0 145 aa3.26□□□□□ -1.89
PROM1-220ENST00000540805 HYDINQ4G0P3 5121 aa3.25□□□□□ -1.89
PROM1-220ENST00000540805 HERC2O95714 4834 aa3.25□□□□□ -1.89
PROM1-220ENST00000540805 Q75L30 129 aa3.25□□□□□ -1.89
PROM1-220ENST00000540805 DNAH11Q96DT5 4516 aa3.25□□□□□ -1.89
PROM1-220ENST00000540805 FAT2Q9NYQ8 4349 aa3.25□□□□□ -1.89
PROM1-220ENST00000540805 CNBPP62633 177 aaKnown RBP3.25□□□□□ -1.89
PROM1-220ENST00000540805 SACSQ9NZJ4 4579 aa3.24□□□□□ -1.89
PROM1-220ENST00000540805 COA5Q86WW8 74 aa3.24□□□□□ -1.89
PROM1-220ENST00000540805 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
PROM1-220ENST00000540805 A8MWP4 228 aa3.24□□□□□ -1.89
PROM1-220ENST00000540805 DNAH17Q9UFH2 4485 aa3.23□□□□□ -1.89
PROM1-220ENST00000540805 ALMS1Q8TCU4 4167 aa3.23□□□□□ -1.89
PROM1-220ENST00000540805 LOC101927531A0A1B0GV80 90 aa3.23□□□□□ -1.89
PROM1-220ENST00000540805 IGLV7-43P04211 117 aa3.23□□□□□ -1.89
PROM1-220ENST00000540805 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.23□□□□□ -1.89
PROM1-220ENST00000540805 IGLV7-46A0A075B6I9 117 aa3.22□□□□□ -1.89
PROM1-220ENST00000540805 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
PROM1-220ENST00000540805 DNAH5Q8TE73 4624 aa3.21□□□□□ -1.89
PROM1-220ENST00000540805 LINC00472Q9H8W2 130 aa3.21□□□□□ -1.9
PROM1-220ENST00000540805 MMP24-AS1A0A0U1RRL7 71 aa3.21□□□□□ -1.9
PROM1-220ENST00000540805 LINC01554Q52M75 96 aa3.21□□□□□ -1.9
PROM1-220ENST00000540805 SSBP3-AS1Q7Z2R9 100 aa3.2□□□□□ -1.9
PROM1-220ENST00000540805 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
PROM1-220ENST00000540805 SPRR1BP22528 89 aa3.19□□□□□ -1.9
PROM1-220ENST00000540805 TP53AIP1Q9HCN2 124 aa3.19□□□□□ -1.9
PROM1-220ENST00000540805 A0A1B0GU69 56 aa3.18□□□□□ -1.9
PROM1-220ENST00000540805 MRPL34Q9BQ48 92 aaKnown RBP3.18□□□□□ -1.9
PROM1-220ENST00000540805 M0R2T5 61 aa3.18□□□□□ -1.9
PROM1-220ENST00000540805 ACYP2P14621 99 aa3.17□□□□□ -1.9
PROM1-220ENST00000540805 KRTAP1-5Q9BYS1 174 aa3.17□□□□□ -1.9
PROM1-220ENST00000540805 PLAC8Q9NZF1 115 aa3.17□□□□□ -1.9
PROM1-220ENST00000540805 Q8N1X5 172 aa3.16□□□□□ -1.9
PROM1-220ENST00000540805 PKHD1P08F94 4074 aa3.16□□□□□ -1.9
PROM1-220ENST00000540805 Q6ZR54 194 aa3.16□□□□□ -1.9
PROM1-220ENST00000540805 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
PROM1-220ENST00000540805 CSAG1Q6PB30 78 aa3.15□□□□□ -1.9
PROM1-220ENST00000540805 HRES1P13985 223 aa3.15□□□□□ -1.91
PROM1-220ENST00000540805 KRTAP11-1Q8IUC1 163 aa3.15□□□□□ -1.91
PROM1-220ENST00000540805 ASB16-AS1Q495Z4 193 aa3.15□□□□□ -1.91
PROM1-220ENST00000540805 A0A1B0GVX0 72 aa3.14□□□□□ -1.91
PROM1-220ENST00000540805 KRTAP10-2P60368 255 aa3.14□□□□□ -1.91
PROM1-220ENST00000540805 Q6ZSA8 131 aa3.14□□□□□ -1.91
PROM1-220ENST00000540805 A0A087X002 238 aa3.13□□□□□ -1.91
PROM1-220ENST00000540805 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
PROM1-220ENST00000540805 LRP1BQ9NZR2 4599 aa3.12□□□□□ -1.91
PROM1-220ENST00000540805 A0A0D9SG42 100 aa3.12□□□□□ -1.91
PROM1-220ENST00000540805 Q5VSD8 79 aa3.12□□□□□ -1.91
PROM1-220ENST00000540805 CRIPTQ9P021 101 aa3.11□□□□□ -1.91
PROM1-220ENST00000540805 Q6ZRN7 208 aaPredicted RBP3.11□□□□□ -1.91
PROM1-220ENST00000540805 VPS13BQ7Z7G8 4022 aa3.11□□□□□ -1.91
PROM1-220ENST00000540805 NOTCH2NLQ7Z3S9 236 aa3.11□□□□□ -1.91
PROM1-220ENST00000540805 RYR1P21817 5038 aa3.1□□□□□ -1.91
PROM1-220ENST00000540805 KRTAP13-1Q8IUC0 172 aa3.1□□□□□ -1.91
PROM1-220ENST00000540805 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
PROM1-220ENST00000540805 PANO1I0J062 215 aa3.08□□□□□ -1.92
PROM1-220ENST00000540805 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
PROM1-220ENST00000540805 Q5W150 140 aa3.06□□□□□ -1.92
PROM1-220ENST00000540805 KRTAP13-3Q3SY46 172 aa3.05□□□□□ -1.92
PROM1-220ENST00000540805 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
PROM1-220ENST00000540805 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
PROM1-220ENST00000540805 UQCR11O14957 56 aa3.03□□□□□ -1.92
PROM1-220ENST00000540805 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
PROM1-220ENST00000540805 APOBP04114 4563 aaKnown RBP3.03□□□□□ -1.93
PROM1-220ENST00000540805 MIR22HGQ0VDD5 57 aa3.02□□□□□ -1.93
PROM1-220ENST00000540805 PKHD1L1Q86WI1 4243 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms