RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 TLX1NBP0CAT3 122 aa4.93□□□□□ -1.62
LDHA-217ENST00000539814 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
LDHA-217ENST00000539814 Q8N9P0 234 aaPredicted RBP4.93□□□□□ -1.62
LDHA-217ENST00000539814 LINC00167Q96N53 147 aa4.93□□□□□ -1.62
LDHA-217ENST00000539814 NDUFB1O75438 58 aa4.92□□□□□ -1.62
LDHA-217ENST00000539814 LINC00158P58513 81 aa4.92□□□□□ -1.62
LDHA-217ENST00000539814 FAM229BQ4G0N7 80 aa4.92□□□□□ -1.62
LDHA-217ENST00000539814 TRAV22A0A0B4J277 110 aa4.91□□□□□ -1.62
LDHA-217ENST00000539814 ASB16-AS1Q495Z4 193 aa4.91□□□□□ -1.62
LDHA-217ENST00000539814 MIR7-3HGQ8N6C7 128 aa4.91□□□□□ -1.62
LDHA-217ENST00000539814 Q8NDZ9 215 aa4.91□□□□□ -1.62
LDHA-217ENST00000539814 SND1-IT1Q9HBX3 110 aa4.91□□□□□ -1.62
LDHA-217ENST00000539814 PLAC8Q9NZF1 115 aa4.9□□□□□ -1.63
LDHA-217ENST00000539814 A8MUN3 132 aa4.89□□□□□ -1.63
LDHA-217ENST00000539814 BPY2O14599 106 aa4.89□□□□□ -1.63
LDHA-217ENST00000539814 NCR3O14931 201 aa4.89□□□□□ -1.63
LDHA-217ENST00000539814 ELOF1P60002 83 aaKnown RBP4.89□□□□□ -1.63
LDHA-217ENST00000539814 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
LDHA-217ENST00000539814 A6NN06 94 aa4.88□□□□□ -1.63
LDHA-217ENST00000539814 PRR3P79522 188 aaKnown RBP4.88□□□□□ -1.63
LDHA-217ENST00000539814 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
LDHA-217ENST00000539814 Q8N377 158 aa4.88□□□□□ -1.63
LDHA-217ENST00000539814 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
LDHA-217ENST00000539814 COX17Q14061 63 aa4.87□□□□□ -1.63
LDHA-217ENST00000539814 Q5VSD8 79 aa4.87□□□□□ -1.63
LDHA-217ENST00000539814 SMIM11BQ8TCY0 68 aa4.86□□□□□ -1.63
LDHA-217ENST00000539814 HCG22E2RYF7 251 aa4.85□□□□□ -1.63
LDHA-217ENST00000539814 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
LDHA-217ENST00000539814 PSPHP1O15172 72 aa4.85□□□□□ -1.63
LDHA-217ENST00000539814 Q6ZQT0 140 aa4.85□□□□□ -1.63
LDHA-217ENST00000539814 C7orf33Q8WU49 177 aa4.85□□□□□ -1.63
LDHA-217ENST00000539814 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
LDHA-217ENST00000539814 MP68P56378 58 aa4.84□□□□□ -1.63
LDHA-217ENST00000539814 KRTAP10-4P60372 401 aaPredicted RBP4.84□□□□□ -1.63
LDHA-217ENST00000539814 RPL37AP61513 92 aaKnown RBP4.84□□□□□ -1.63
LDHA-217ENST00000539814 C1orf64Q8NEQ6 169 aa4.84□□□□□ -1.63
LDHA-217ENST00000539814 IGKV2-28A0A075B6P5 120 aa4.83□□□□□ -1.64
LDHA-217ENST00000539814 IGKV2D-28P01615 120 aa4.83□□□□□ -1.64
LDHA-217ENST00000539814 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
LDHA-217ENST00000539814 Q5VV11 94 aa4.83□□□□□ -1.64
LDHA-217ENST00000539814 SPTSSBQ8NFR3 76 aa4.83□□□□□ -1.64
LDHA-217ENST00000539814 VPS13BQ7Z7G8 4022 aa4.82□□□□□ -1.64
LDHA-217ENST00000539814 PCLOQ9Y6V0 5065 aa4.82□□□□□ -1.64
LDHA-217ENST00000539814 PRR4Q16378 134 aa4.82□□□□□ -1.64
LDHA-217ENST00000539814 PSORS1C2Q9UIG4 136 aa4.82□□□□□ -1.64
LDHA-217ENST00000539814 PKHD1L1Q86WI1 4243 aa4.81□□□□□ -1.64
LDHA-217ENST00000539814 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
LDHA-217ENST00000539814 A0A1B0GW54 56 aa4.81□□□□□ -1.64
LDHA-217ENST00000539814 NDUFAF8A1L188 74 aa4.81□□□□□ -1.64
LDHA-217ENST00000539814 C1orf137Q5JT78 98 aa4.81□□□□□ -1.64
LDHA-217ENST00000539814 LINC00337Q8N6G1 96 aa4.81□□□□□ -1.64
LDHA-217ENST00000539814 Q9BRP9 147 aa4.81□□□□□ -1.64
LDHA-217ENST00000539814 SRRM2Q9UQ35 2752 aaKnown RBP4.81□□□□□ -1.64
LDHA-217ENST00000539814 A6NED7 52 aa4.8□□□□□ -1.64
LDHA-217ENST00000539814 IGLV8-61A0A075B6I0 122 aa4.79□□□□□ -1.64
LDHA-217ENST00000539814 CASC2Q6XLA1 102 aa4.79□□□□□ -1.64
LDHA-217ENST00000539814 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
LDHA-217ENST00000539814 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
LDHA-217ENST00000539814 H3BPC8 53 aa4.77□□□□□ -1.65
LDHA-217ENST00000539814 IGLV7-43P04211 117 aa4.77□□□□□ -1.65
LDHA-217ENST00000539814 PRLHP81277 87 aa4.77□□□□□ -1.65
LDHA-217ENST00000539814 HIGD2AQ9BW72 106 aa4.77□□□□□ -1.65
LDHA-217ENST00000539814 FLG2Q5D862 2391 aaPredicted RBP4.77□□□□□ -1.65
LDHA-217ENST00000539814 H0Y9J4 135 aa4.76□□□□□ -1.65
LDHA-217ENST00000539814 ZCCHC13Q8WW36 166 aaKnown RBP4.76□□□□□ -1.65
LDHA-217ENST00000539814 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
LDHA-217ENST00000539814 KRTAP29-1A8MX34 341 aaPredicted RBP4.75□□□□□ -1.65
LDHA-217ENST00000539814 IGLV6-57P01721 117 aa4.75□□□□□ -1.65
LDHA-217ENST00000539814 LINC00313P59037 77 aa4.75□□□□□ -1.65
LDHA-217ENST00000539814 LINC00208Q96KT6 92 aa4.74□□□□□ -1.65
LDHA-217ENST00000539814 MYCBP2O75592 4640 aa4.73□□□□□ -1.65
LDHA-217ENST00000539814 ETDCA0A1B0GVM5 59 aa4.73□□□□□ -1.65
LDHA-217ENST00000539814 IGKV4-1P06312 121 aa4.73□□□□□ -1.65
LDHA-217ENST00000539814 COX7BP24311 80 aa4.73□□□□□ -1.65
LDHA-217ENST00000539814 KRTAP13-1Q8IUC0 172 aa4.73□□□□□ -1.65
LDHA-217ENST00000539814 KCNQ1DNQ9H478 68 aa4.73□□□□□ -1.65
LDHA-217ENST00000539814 LRP1Q07954 4544 aaKnown RBP4.73□□□□□ -1.65
LDHA-217ENST00000539814 KRTAP4-16G5E9R7 235 aaPredicted RBP4.72□□□□□ -1.65
LDHA-217ENST00000539814 ZNF861PO60384 105 aa4.72□□□□□ -1.65
LDHA-217ENST00000539814 SPRR1AP35321 89 aa4.72□□□□□ -1.65
LDHA-217ENST00000539814 LINC00575Q6W349 94 aa4.72□□□□□ -1.65
LDHA-217ENST00000539814 FAT3Q8TDW7 4589 aa4.72□□□□□ -1.65
LDHA-217ENST00000539814 MOBPQ13875 183 aa4.71□□□□□ -1.66
LDHA-217ENST00000539814 C6orf99Q4VX62 202 aa4.71□□□□□ -1.66
LDHA-217ENST00000539814 SPINK6Q6UWN8 80 aa4.71□□□□□ -1.66
LDHA-217ENST00000539814 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.71□□□□□ -1.66
LDHA-217ENST00000539814 ANAPC11Q9NYG5 84 aa4.7□□□□□ -1.66
LDHA-217ENST00000539814 KRTAP1-4P0C5Y4 121 aa4.68□□□□□ -1.66
LDHA-217ENST00000539814 Q6ZRX8 168 aa4.68□□□□□ -1.66
LDHA-217ENST00000539814 LINC01558Q9Y6Z2 57 aa4.68□□□□□ -1.66
LDHA-217ENST00000539814 ST20-AS1Q8NBB2 130 aa4.67□□□□□ -1.66
LDHA-217ENST00000539814 RETNLBQ9BQ08 111 aa4.67□□□□□ -1.66
LDHA-217ENST00000539814 SPRR4Q96PI1 79 aa4.65□□□□□ -1.67
LDHA-217ENST00000539814 TNXBP22105 4242 aa4.65□□□□□ -1.67
LDHA-217ENST00000539814 MT1HL1P0DM35 61 aa4.64□□□□□ -1.67
LDHA-217ENST00000539814 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
LDHA-217ENST00000539814 DEFB105AQ8NG35 78 aa4.63□□□□□ -1.67
LDHA-217ENST00000539814 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
LDHA-217ENST00000539814 DMBT1Q9UGM3 2413 aaPredicted RBP4.61□□□□□ -1.67
LDHA-217ENST00000539814 A8MU10 97 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms