RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 Q5VV11 94 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 Q6ZRN7 208 aaPredicted RBP1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 NTM-AS1Q6ZSK4 140 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 Q8NDZ9 215 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 RPP21Q9H633 154 aaKnown RBP1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 NOP10Q9NPE3 64 aaKnown RBP1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 ORMDL1Q9P0S3 153 aa1.13□□□□□ -2.23
CBX3P4-201ENST00000538909 A0A087WVE0 104 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 DEFB131BA0A096LNP1 70 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 LRCOL1A6NCL2 159 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 NUPR2A6NF83 97 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 HIGD1CA8MV81 97 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 M0QY20 66 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 PSCAO43653 123 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 PPP1R17O96001 155 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 UBE2D1P51668 147 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 POLR2KP53803 58 aaKnown RBP1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 SPAG11BQ08648 103 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 CSAG1Q6PB30 78 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 SPAG11AQ6PDA7 123 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 KRTAP26-1Q6PEX3 210 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 C14orf178Q8N769 122 aaPredicted RBP1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 PRO0255Q9UI72 69 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 UBE2D4Q9Y2X8 147 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 HERC1Q15751 4861 aa1.12□□□□□ -2.23
CBX3P4-201ENST00000538909 A0A096LNJ9 63 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 TRGV1A0A0A0MS02 117 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 TRBV6-8A0A0A6YYG3 113 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 TRBV30A0A0K0K1B3 111 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 A0A1B0GUT8 65 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 H3BQ85 93 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 BAALC-AS2P0C853 105 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 LINC01556Q5JQF7 62 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 LELP1Q5T871 98 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 CDC42SE2Q9NRR3 84 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 C22orf24Q9Y442 160 aa1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 SRRM2Q9UQ35 2752 aaKnown RBP1.11□□□□□ -2.23
CBX3P4-201ENST00000538909 IGLV10-54A0A075B6I4 117 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 A0A0J9YY99 117 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 LOC101927531A0A1B0GV80 90 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 A8MUU9 505 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 IGHV3-33P01772 117 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 IGLV7-43P04211 117 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 PLNP26678 52 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 ELOF1P60002 83 aaKnown RBP1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 NREPQ16612 68 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 FAM74A4Q5TZK3 123 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 WFDC10BQ8IUB3 73 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 RPL39LQ96EH5 51 aaKnown RBP1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 C20orf166-AS1Q96NR2 134 aa1.1□□□□□ -2.23
CBX3P4-201ENST00000538909 HMCN2Q8NDA2 5059 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 IGLV4-60A0A075B6I1 120 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 TRGV2A0A075B6R0 118 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 NBDYA0A0U1RRE5 68 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 IGHV3-30P01768 117 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 IGHV3-30-5P0DP03 117 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 DEFB130BP0DP73 79 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 DEFB130AP0DP74 79 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 HTN1P15515 57 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 ENHOQ6UWT2 76 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 Q6ZSA8 131 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 C15orf56Q8N910 161 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 AMELXQ99217 191 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 SMIM2Q9BVW6 85 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 UBL5Q9BZL1 73 aa1.09□□□□□ -2.23
CBX3P4-201ENST00000538909 IGHV3-64A0A075B6Q5 118 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 A0A087WSZ3 146 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 TRAV12-1A0A0B4J245 112 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 TRGV4A0A0C4DH28 118 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 TRBV7-4A0A0J9YYF1 115 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 IGIPA6NJ69 53 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 F8VRH5 84 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 NDUFB1O75438 58 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 P0C880 135 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 KRTAP10-4P60372 401 aaPredicted RBP1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 DEFB116Q30KQ4 102 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 LINC00483Q53H64 154 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 SPINT4Q6UDR6 99 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 DMAC1Q96GE9 116 aa1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
CBX3P4-201ENST00000538909 FCGBPQ9Y6R7 5405 aaPredicted RBP1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 LRP2P98164 4655 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 IGLV4-69A0A075B6H9 119 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 A0A087WTM6 91 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 IGKV2-29A2NJV5 120 aaPredicted RBP1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 PANO1I0J062 215 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 I3L3M4 83 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 LY6G6CO95867 125 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 MGPP08493 103 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 HTN3P15516 51 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 CCL18P55774 89 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 CNBPP62633 177 aaKnown RBP1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 RPL39P62891 51 aaKnown RBP1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 C9orf129Q5T035 196 aaKnown RBP1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 COX7B2Q8TF08 81 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 LINC00208Q96KT6 92 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 LINC00846Q9NV44 126 aa1.07□□□□□ -2.24
CBX3P4-201ENST00000538909 UBR4Q5T4S7 5183 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms