RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 IGKV2-28A0A075B6P5 120 aa2.2□□□□□ -2.06
PTPN22-211ENST00000538253 IGKV2D-28P01615 120 aa2.2□□□□□ -2.06
PTPN22-211ENST00000538253 SMR3BP02814 79 aaPredicted RBP2.2□□□□□ -2.06
PTPN22-211ENST00000538253 NOTCH2NLQ7Z3S9 236 aa2.2□□□□□ -2.06
PTPN22-211ENST00000538253 TYMSOSQ8TAI1 123 aa2.2□□□□□ -2.06
PTPN22-211ENST00000538253 UBL5Q9BZL1 73 aa2.2□□□□□ -2.06
PTPN22-211ENST00000538253 SPRR1BP22528 89 aa2.2□□□□□ -2.06
PTPN22-211ENST00000538253 SEC61BP60468 96 aaKnown RBP2.2□□□□□ -2.06
PTPN22-211ENST00000538253 ORMDL1Q9P0S3 153 aa2.2□□□□□ -2.06
PTPN22-211ENST00000538253 SPINK1P00995 79 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 ROMO1P60602 79 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 SPRR4Q96PI1 79 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 TENM2Q9NT68 2774 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 KRTAP16-1A8MUX0 517 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 JMJD7-PLA2G4BH0Y9G9 81 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 LINC01547P58512 204 aaPredicted RBP2.19□□□□□ -2.06
PTPN22-211ENST00000538253 CMYA5Q8N3K9 4069 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 IGLV9-49A0A0B4J1Y8 123 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 BPY2O14599 106 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 CASC2Q6XLA1 102 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 LINC00304Q8N9R0 145 aa2.19□□□□□ -2.06
PTPN22-211ENST00000538253 LOC101927531A0A1B0GV80 90 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 LINC00483Q53H64 154 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 LINC00575Q6W349 94 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 FAM168BA1KXE4 195 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 ASB16-AS1Q495Z4 193 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 SMIM11BQ8TCY0 68 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 DNAH1Q9P2D7 4330 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 HAMPP81172 84 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 OCR1Q9BZK8 76 aa2.18□□□□□ -2.06
PTPN22-211ENST00000538253 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
PTPN22-211ENST00000538253 VPS13CQ709C8 3753 aa2.17□□□□□ -2.06
PTPN22-211ENST00000538253 PRLHP81277 87 aa2.17□□□□□ -2.06
PTPN22-211ENST00000538253 PRR4Q16378 134 aa2.17□□□□□ -2.06
PTPN22-211ENST00000538253 Q9BRP9 147 aa2.17□□□□□ -2.06
PTPN22-211ENST00000538253 PLECQ15149 4684 aaKnown RBP2.17□□□□□ -2.06
PTPN22-211ENST00000538253 PRKDCP78527 4128 aaKnown RBP2.17□□□□□ -2.06
PTPN22-211ENST00000538253 IGLV5-48A0A075B6I7 105 aa2.16□□□□□ -2.06
PTPN22-211ENST00000538253 KRTAP13-1Q8IUC0 172 aa2.16□□□□□ -2.06
PTPN22-211ENST00000538253 PANO1I0J062 215 aa2.16□□□□□ -2.06
PTPN22-211ENST00000538253 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
PTPN22-211ENST00000538253 P0C880 135 aa2.16□□□□□ -2.06
PTPN22-211ENST00000538253 A0A1W2PNM2 257 aa2.15□□□□□ -2.06
PTPN22-211ENST00000538253 KRTAP4-16G5E9R7 235 aaPredicted RBP2.15□□□□□ -2.06
PTPN22-211ENST00000538253 A0A087X002 238 aa2.15□□□□□ -2.07
PTPN22-211ENST00000538253 Q6ZQY7 126 aa2.15□□□□□ -2.07
PTPN22-211ENST00000538253 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.07
PTPN22-211ENST00000538253 IGLV8-61A0A075B6I0 122 aa2.15□□□□□ -2.07
PTPN22-211ENST00000538253 DNAH17Q9UFH2 4485 aa2.14□□□□□ -2.07
PTPN22-211ENST00000538253 SPINK7P58062 85 aa2.14□□□□□ -2.07
PTPN22-211ENST00000538253 NDUFB1O75438 58 aa2.14□□□□□ -2.07
PTPN22-211ENST00000538253 DEFB105AQ8NG35 78 aa2.14□□□□□ -2.07
PTPN22-211ENST00000538253 ZCCHC13Q8WW36 166 aaKnown RBP2.14□□□□□ -2.07
PTPN22-211ENST00000538253 MIR22HGQ0VDD5 57 aa2.14□□□□□ -2.07
PTPN22-211ENST00000538253 DNAH10Q8IVF4 4471 aa2.14□□□□□ -2.07
PTPN22-211ENST00000538253 KIAA1109Q2LD37 5005 aa2.13□□□□□ -2.07
PTPN22-211ENST00000538253 RYR1P21817 5038 aa2.13□□□□□ -2.07
PTPN22-211ENST00000538253 KRTAP10-8P60410 259 aa2.13□□□□□ -2.07
PTPN22-211ENST00000538253 Q8NDZ9 215 aa2.13□□□□□ -2.07
PTPN22-211ENST00000538253 KRTAP7-1Q8IUC3 87 aa2.13□□□□□ -2.07
PTPN22-211ENST00000538253 LINC00208Q96KT6 92 aa2.13□□□□□ -2.07
PTPN22-211ENST00000538253 DNAH7Q8WXX0 4024 aa2.13□□□□□ -2.07
PTPN22-211ENST00000538253 CUBNO60494 3623 aa2.12□□□□□ -2.07
PTPN22-211ENST00000538253 KRTAP10-4P60372 401 aaPredicted RBP2.12□□□□□ -2.07
PTPN22-211ENST00000538253 Q6ZQT0 140 aa2.12□□□□□ -2.07
PTPN22-211ENST00000538253 C8orf17Q9NRJ1 99 aa2.12□□□□□ -2.07
PTPN22-211ENST00000538253 A8MWP4 228 aa2.11□□□□□ -2.07
PTPN22-211ENST00000538253 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
PTPN22-211ENST00000538253 KRTAP1-4P0C5Y4 121 aa2.11□□□□□ -2.07
PTPN22-211ENST00000538253 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
PTPN22-211ENST00000538253 Q8N9L7 120 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 LINC01558Q9Y6Z2 57 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 RYR2Q92736 4967 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 IGLV7-46A0A075B6I9 117 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 LOC110117498A0A087WWA1 95 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 IGKV4-1P06312 121 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 Q8N377 158 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 ST20-AS1Q8NBB2 130 aa2.1□□□□□ -2.07
PTPN22-211ENST00000538253 EPPK1P58107 5090 aaKnown RBP2.1□□□□□ -2.07
PTPN22-211ENST00000538253 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
PTPN22-211ENST00000538253 COL7A1Q02388 2944 aa2.09□□□□□ -2.07
PTPN22-211ENST00000538253 STARD9Q9P2P6 4700 aa2.09□□□□□ -2.08
PTPN22-211ENST00000538253 NDUFAF8A1L188 74 aa2.08□□□□□ -2.08
PTPN22-211ENST00000538253 TPRXLQ17RH7 258 aa2.08□□□□□ -2.08
PTPN22-211ENST00000538253 KRTAP11-1Q8IUC1 163 aa2.08□□□□□ -2.08
PTPN22-211ENST00000538253 HERC2O95714 4834 aa2.08□□□□□ -2.08
PTPN22-211ENST00000538253 SACSQ9NZJ4 4579 aa2.08□□□□□ -2.08
PTPN22-211ENST00000538253 DYNC1H1Q14204 4646 aaKnown RBP2.08□□□□□ -2.08
PTPN22-211ENST00000538253 SMIM29Q86T20 159 aa2.08□□□□□ -2.08
PTPN22-211ENST00000538253 C20orf166-AS1Q96NR2 134 aa2.08□□□□□ -2.08
PTPN22-211ENST00000538253 IGFL1Q6UW32 110 aa2.07□□□□□ -2.08
PTPN22-211ENST00000538253 KRTAP13-2Q52LG2 175 aa2.07□□□□□ -2.08
PTPN22-211ENST00000538253 COA5Q86WW8 74 aa2.07□□□□□ -2.08
PTPN22-211ENST00000538253 SPANXA2-OT1Q8N9U9 137 aa2.07□□□□□ -2.08
PTPN22-211ENST00000538253 MT1HL1P0DM35 61 aa2.06□□□□□ -2.08
PTPN22-211ENST00000538253 A0A087WSZ3 146 aa2.06□□□□□ -2.08
PTPN22-211ENST00000538253 H0Y9P7 68 aa2.05□□□□□ -2.08
PTPN22-211ENST00000538253 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
PTPN22-211ENST00000538253 KRTAP19-4Q3LI73 84 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms