RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 LRP2P98164 4655 aa13.32□□□□□ -0.28
HMGA2-208ENST00000537429 A8MWP4 228 aa13.31□□□□□ -0.28
HMGA2-208ENST00000537429 A0A1B0GVX0 72 aa13.29□□□□□ -0.28
HMGA2-208ENST00000537429 NDUFB1O75438 58 aa13.29□□□□□ -0.28
HMGA2-208ENST00000537429 IGKV3D-7A0A0C4DH55 119 aa13.28□□□□□ -0.28
HMGA2-208ENST00000537429 IGHV6-1A0A0B4J1U7 121 aa13.27□□□□□ -0.29
HMGA2-208ENST00000537429 LINC00313P59037 77 aa13.23□□□□□ -0.29
HMGA2-208ENST00000537429 PRR15Q8IV56 129 aa13.23□□□□□ -0.29
HMGA2-208ENST00000537429 NOTCH2NLQ7Z3S9 236 aa13.23□□□□□ -0.29
HMGA2-208ENST00000537429 K7EQZ3 153 aa13.22□□□□□ -0.29
HMGA2-208ENST00000537429 XP32Q5T750 250 aa13.22□□□□□ -0.29
HMGA2-208ENST00000537429 K7ERU9 68 aa13.21□□□□□ -0.29
HMGA2-208ENST00000537429 C8orf87E5RJ46 101 aa13.2□□□□□ -0.3
HMGA2-208ENST00000537429 CXCL6P80162 114 aa13.2□□□□□ -0.3
HMGA2-208ENST00000537429 Q8N9L7 120 aa13.18□□□□□ -0.3
HMGA2-208ENST00000537429 LINC00643Q86TS7 51 aa13.16□□□□□ -0.3
HMGA2-208ENST00000537429 C8orf17Q9NRJ1 99 aa13.15□□□□□ -0.3
HMGA2-208ENST00000537429 KRTAP16-1A8MUX0 517 aa13.14□□□□□ -0.31
HMGA2-208ENST00000537429 ATP5EP2Q5VTU8 51 aa13.13□□□□□ -0.31
HMGA2-208ENST00000537429 MMP24-AS1A0A0U1RRL7 71 aa13.09□□□□□ -0.31
HMGA2-208ENST00000537429 C20orf166-AS1Q96NR2 134 aa13.08□□□□□ -0.32
HMGA2-208ENST00000537429 RPL37P61927 97 aaKnown RBP13.05□□□□□ -0.32
HMGA2-208ENST00000537429 Q75L30 129 aa13.05□□□□□ -0.32
HMGA2-208ENST00000537429 A8MUU9 505 aa13.04□□□□□ -0.32
HMGA2-208ENST00000537429 hDV103S1A0JD37 113 aa13.02□□□□□ -0.33
HMGA2-208ENST00000537429 SEC61BP60468 96 aaKnown RBP13.01□□□□□ -0.33
HMGA2-208ENST00000537429 TMEM254Q8TBM7 123 aa13□□□□□ -0.33
HMGA2-208ENST00000537429 MUC17Q685J3 4493 aa12.99□□□□□ -0.33
HMGA2-208ENST00000537429 Q8N9P0 234 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-208ENST00000537429 UBR4Q5T4S7 5183 aa12.98□□□□□ -0.33
HMGA2-208ENST00000537429 HCG22E2RYF7 251 aa12.98□□□□□ -0.33
HMGA2-208ENST00000537429 WFDC13Q8IUB5 93 aa12.98□□□□□ -0.33
HMGA2-208ENST00000537429 MRPL34Q9BQ48 92 aaKnown RBP12.98□□□□□ -0.33
HMGA2-208ENST00000537429 CASC2Q6XLA1 102 aa12.97□□□□□ -0.33
HMGA2-208ENST00000537429 HIST1H4AP62805 103 aaKnown RBP12.96□□□□□ -0.33
HMGA2-208ENST00000537429 PCOTHQ58A44 107 aa12.93□□□□□ -0.34
HMGA2-208ENST00000537429 ATP11AUNQ6ZP68 121 aa12.93□□□□□ -0.34
HMGA2-208ENST00000537429 A0A087WVE0 104 aa12.87□□□□□ -0.35
HMGA2-208ENST00000537429 NDUFS5O43920 106 aa12.86□□□□□ -0.35
HMGA2-208ENST00000537429 MT-ATP8P03928 68 aa12.85□□□□□ -0.35
HMGA2-208ENST00000537429 IMUPQ9GZP8 106 aa12.81□□□□□ -0.36
HMGA2-208ENST00000537429 ZCCHC13Q8WW36 166 aaKnown RBP12.78□□□□□ -0.36
HMGA2-208ENST00000537429 KRTAP4-1Q9BYQ7 146 aa12.75□□□□□ -0.37
HMGA2-208ENST00000537429 RNF213Q63HN8 5207 aa12.74□□□□□ -0.37
HMGA2-208ENST00000537429 MUC2Q02817 5179 aa12.71□□□□□ -0.37
HMGA2-208ENST00000537429 TP53AIP1Q9HCN2 124 aa12.69□□□□□ -0.38
HMGA2-208ENST00000537429 Q5W150 140 aa12.67□□□□□ -0.38
HMGA2-208ENST00000537429 FAM236AA0A1B0GUQ0 79 aa12.55□□□□□ -0.4
HMGA2-208ENST00000537429 FAM236BA0A1B0GV22 79 aa12.55□□□□□ -0.4
HMGA2-208ENST00000537429 SCGB1A1P11684 91 aa12.55□□□□□ -0.4
HMGA2-208ENST00000537429 OCR1Q9BZK8 76 aa12.55□□□□□ -0.4
HMGA2-208ENST00000537429 UQCRQO14949 82 aa12.54□□□□□ -0.4
HMGA2-208ENST00000537429 SPINK7P58062 85 aa12.54□□□□□ -0.4
HMGA2-208ENST00000537429 TRAV22A0A0B4J277 110 aa12.5□□□□□ -0.41
HMGA2-208ENST00000537429 IGKV2D-30A0A075B6S6 120 aa12.46□□□□□ -0.42
HMGA2-208ENST00000537429 IGKV2-30P06310 120 aa12.46□□□□□ -0.42
HMGA2-208ENST00000537429 A0A0U1RQV1 116 aa12.44□□□□□ -0.42
HMGA2-208ENST00000537429 C7orf65Q6ZTY9 151 aa12.44□□□□□ -0.42
HMGA2-208ENST00000537429 HRES1P13985 223 aa12.42□□□□□ -0.42
HMGA2-208ENST00000537429 H0Y9P7 68 aa12.42□□□□□ -0.42
HMGA2-208ENST00000537429 SMIM20Q8N5G0 67 aa12.39□□□□□ -0.43
HMGA2-208ENST00000537429 ATOX1O00244 68 aa12.38□□□□□ -0.43
HMGA2-208ENST00000537429 C5orf47Q569G3 176 aa12.37□□□□□ -0.43
HMGA2-208ENST00000537429 KRTAP19-2Q3LHN2 52 aa12.37□□□□□ -0.43
HMGA2-208ENST00000537429 MPLKIPQ8TAP9 179 aa12.36□□□□□ -0.43
HMGA2-208ENST00000537429 TRAV7A0A075B6U4 112 aa12.35□□□□□ -0.43
HMGA2-208ENST00000537429 LOC101927531A0A1B0GV80 90 aa12.33□□□□□ -0.44
HMGA2-208ENST00000537429 COX6B2Q6YFQ2 88 aa12.33□□□□□ -0.44
HMGA2-208ENST00000537429 MP68P56378 58 aa12.32□□□□□ -0.44
HMGA2-208ENST00000537429 CYP4F30PQ9H0H9 118 aa12.32□□□□□ -0.44
HMGA2-208ENST00000537429 RBM12B-AS1Q9P1G2 102 aa12.32□□□□□ -0.44
HMGA2-208ENST00000537429 FAT4Q6V0I7 4981 aa12.29□□□□□ -0.44
HMGA2-208ENST00000537429 LINC00208Q96KT6 92 aa12.29□□□□□ -0.44
HMGA2-208ENST00000537429 C1orf64Q8NEQ6 169 aa12.28□□□□□ -0.44
HMGA2-208ENST00000537429 LCE2CQ5TA81 110 aa12.27□□□□□ -0.44
HMGA2-208ENST00000537429 FAM236DA0A1B0GTK5 79 aa12.27□□□□□ -0.45
HMGA2-208ENST00000537429 FAM236CP0DP71 79 aa12.27□□□□□ -0.45
HMGA2-208ENST00000537429 H3BPC8 53 aa12.26□□□□□ -0.45
HMGA2-208ENST00000537429 SERP2Q8N6R1 65 aa12.21□□□□□ -0.45
HMGA2-208ENST00000537429 C4orf26Q17RF5 130 aa12.17□□□□□ -0.46
HMGA2-208ENST00000537429 KLKP1Q107X0 134 aa12.12□□□□□ -0.47
HMGA2-208ENST00000537429 COX7CP15954 63 aa12.06□□□□□ -0.48
HMGA2-208ENST00000537429 FLGP20930 4061 aaPredicted RBP12.06□□□□□ -0.48
HMGA2-208ENST00000537429 MT1HP80294 61 aa12.06□□□□□ -0.48
HMGA2-208ENST00000537429 C20orf197Q8N268 126 aa12.04□□□□□ -0.48
HMGA2-208ENST00000537429 LCE2AQ5TA79 106 aaPredicted RBP12.03□□□□□ -0.48
HMGA2-208ENST00000537429 ANAPC13Q9BS18 74 aa12.03□□□□□ -0.48
HMGA2-208ENST00000537429 KRTAP3-1Q9BYR8 98 aa12.03□□□□□ -0.48
HMGA2-208ENST00000537429 SNURFQ9Y675 71 aa12.02□□□□□ -0.48
HMGA2-208ENST00000537429 H1FX-AS1Q4G0G2 97 aa12□□□□□ -0.49
HMGA2-208ENST00000537429 M0R2T5 61 aa11.98□□□□□ -0.49
HMGA2-208ENST00000537429 A8MUN3 132 aa11.85□□□□□ -0.51
HMGA2-208ENST00000537429 DMAC1Q96GE9 116 aa11.79□□□□□ -0.52
HMGA2-208ENST00000537429 CYSTM1Q9H1C7 97 aa11.78□□□□□ -0.52
HMGA2-208ENST00000537429 CCDC179H3BU77 68 aa11.77□□□□□ -0.52
HMGA2-208ENST00000537429 S4R3F8 94 aa11.76□□□□□ -0.53
HMGA2-208ENST00000537429 NDUFC1O43677 76 aa11.76□□□□□ -0.53
HMGA2-208ENST00000537429 SPANXA2-OT1Q8N9U9 137 aa11.76□□□□□ -0.53
HMGA2-208ENST00000537429 H7BZZ5 65 aa11.72□□□□□ -0.53
HMGA2-208ENST00000537429 LCA10Q71F78 164 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms