RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 KRTAP16-1A8MUX0 517 aa9.91□□□□□ -0.82
TNFRSF1B-204ENST00000536782 IGKV4-1P06312 121 aa9.91□□□□□ -0.82
TNFRSF1B-204ENST00000536782 FAM236CP0DP71 79 aa9.91□□□□□ -0.82
TNFRSF1B-204ENST00000536782 C21orf62-AS1Q17RA5 79 aa9.88□□□□□ -0.83
TNFRSF1B-204ENST00000536782 C9JAW5 83 aa9.87□□□□□ -0.83
TNFRSF1B-204ENST00000536782 LINC00472Q9H8W2 130 aa9.87□□□□□ -0.83
TNFRSF1B-204ENST00000536782 FCGBPQ9Y6R7 5405 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1B-204ENST00000536782 JMJD7-PLA2G4BH0Y9G9 81 aa9.86□□□□□ -0.83
TNFRSF1B-204ENST00000536782 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
TNFRSF1B-204ENST00000536782 RBM12B-AS1Q9P1G2 102 aa9.85□□□□□ -0.83
TNFRSF1B-204ENST00000536782 MT2AP02795 61 aa9.84□□□□□ -0.83
TNFRSF1B-204ENST00000536782 NOTCH2NLQ7Z3S9 236 aa9.83□□□□□ -0.84
TNFRSF1B-204ENST00000536782 HRES1P13985 223 aa9.82□□□□□ -0.84
TNFRSF1B-204ENST00000536782 DEFB116Q30KQ4 102 aa9.82□□□□□ -0.84
TNFRSF1B-204ENST00000536782 MPLKIPQ8TAP9 179 aa9.82□□□□□ -0.84
TNFRSF1B-204ENST00000536782 C9orf118A6NHY6 69 aa9.81□□□□□ -0.84
TNFRSF1B-204ENST00000536782 LOC110117498A0A087WWA1 95 aa9.8□□□□□ -0.84
TNFRSF1B-204ENST00000536782 PDE6GP18545 87 aa9.8□□□□□ -0.84
TNFRSF1B-204ENST00000536782 IGHV6-1A0A0B4J1U7 121 aa9.79□□□□□ -0.84
TNFRSF1B-204ENST00000536782 A0A1B0GW54 56 aa9.79□□□□□ -0.84
TNFRSF1B-204ENST00000536782 TAX1BP3O14907 124 aa9.79□□□□□ -0.84
TNFRSF1B-204ENST00000536782 Q6ZQT0 140 aa9.79□□□□□ -0.84
TNFRSF1B-204ENST00000536782 A0A1W2PPM0 123 aa9.76□□□□□ -0.85
TNFRSF1B-204ENST00000536782 LCE2BO14633 110 aa9.76□□□□□ -0.85
TNFRSF1B-204ENST00000536782 MT1FP04733 61 aa9.76□□□□□ -0.85
TNFRSF1B-204ENST00000536782 J3KT08 172 aa9.75□□□□□ -0.85
TNFRSF1B-204ENST00000536782 H3BT86 120 aa9.73□□□□□ -0.85
TNFRSF1B-204ENST00000536782 KRTAP10-10P60014 251 aa9.73□□□□□ -0.85
TNFRSF1B-204ENST00000536782 C14orf132Q9NPU4 83 aa9.73□□□□□ -0.85
TNFRSF1B-204ENST00000536782 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
TNFRSF1B-204ENST00000536782 C8orf87E5RJ46 101 aa9.72□□□□□ -0.85
TNFRSF1B-204ENST00000536782 KRTAP19-1Q8IUB9 90 aa9.71□□□□□ -0.86
TNFRSF1B-204ENST00000536782 KRTAP9-3Q9BYQ3 159 aa9.71□□□□□ -0.86
TNFRSF1B-204ENST00000536782 COL5A1-AS1Q5SY13 56 aa9.7□□□□□ -0.86
TNFRSF1B-204ENST00000536782 MTURNQ8N3F0 131 aa9.7□□□□□ -0.86
TNFRSF1B-204ENST00000536782 NDUFB1O75438 58 aa9.65□□□□□ -0.86
TNFRSF1B-204ENST00000536782 ZCCHC13Q8WW36 166 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1B-204ENST00000536782 SPCS1Q9Y6A9 102 aa9.64□□□□□ -0.87
TNFRSF1B-204ENST00000536782 A8MWP4 228 aa9.62□□□□□ -0.87
TNFRSF1B-204ENST00000536782 SPINK7P58062 85 aa9.61□□□□□ -0.87
TNFRSF1B-204ENST00000536782 NREPQ16612 68 aa9.59□□□□□ -0.87
TNFRSF1B-204ENST00000536782 PCP4L1A6NKN8 68 aa9.56□□□□□ -0.88
TNFRSF1B-204ENST00000536782 MACF1Q9UPN3 7388 aaKnown RBP9.56□□□□□ -0.88
TNFRSF1B-204ENST00000536782 IGKV3D-7A0A0C4DH55 119 aa9.55□□□□□ -0.88
TNFRSF1B-204ENST00000536782 C8orf17Q9NRJ1 99 aa9.55□□□□□ -0.88
TNFRSF1B-204ENST00000536782 Q8N9P0 234 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF1B-204ENST00000536782 SYNE2Q8WXH0 6885 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1B-204ENST00000536782 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
TNFRSF1B-204ENST00000536782 K7EP34 96 aa9.51□□□□□ -0.89
TNFRSF1B-204ENST00000536782 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1B-204ENST00000536782 GTF2H5Q6ZYL4 71 aa9.51□□□□□ -0.89
TNFRSF1B-204ENST00000536782 LINC00846Q9NV44 126 aa9.5□□□□□ -0.89
TNFRSF1B-204ENST00000536782 WFDC13Q8IUB5 93 aa9.49□□□□□ -0.89
TNFRSF1B-204ENST00000536782 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
TNFRSF1B-204ENST00000536782 Q6ZVQ6 151 aa9.47□□□□□ -0.89
TNFRSF1B-204ENST00000536782 MMP24-AS1A0A0U1RRL7 71 aa9.44□□□□□ -0.9
TNFRSF1B-204ENST00000536782 BPY2O14599 106 aa9.44□□□□□ -0.9
TNFRSF1B-204ENST00000536782 KRTAP19-6Q3LI70 58 aa9.44□□□□□ -0.9
TNFRSF1B-204ENST00000536782 TMEM254Q8TBM7 123 aa9.43□□□□□ -0.9
TNFRSF1B-204ENST00000536782 K7EQZ3 153 aa9.42□□□□□ -0.9
TNFRSF1B-204ENST00000536782 F8W1H4 67 aa9.41□□□□□ -0.9
TNFRSF1B-204ENST00000536782 MRPL34Q9BQ48 92 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1B-204ENST00000536782 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
TNFRSF1B-204ENST00000536782 UBL5Q9BZL1 73 aa9.34□□□□□ -0.91
TNFRSF1B-204ENST00000536782 H1FX-AS1Q4G0G2 97 aa9.3□□□□□ -0.92
TNFRSF1B-204ENST00000536782 NDUFS5O43920 106 aa9.29□□□□□ -0.92
TNFRSF1B-204ENST00000536782 Q8N9L7 120 aa9.29□□□□□ -0.92
TNFRSF1B-204ENST00000536782 ETDBQ3ZM63 59 aa9.26□□□□□ -0.93
TNFRSF1B-204ENST00000536782 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
TNFRSF1B-204ENST00000536782 KRTAP6-3Q3LI67 103 aa9.21□□□□□ -0.94
TNFRSF1B-204ENST00000536782 IGKV2D-30A0A075B6S6 120 aa9.19□□□□□ -0.94
TNFRSF1B-204ENST00000536782 HCG22E2RYF7 251 aa9.19□□□□□ -0.94
TNFRSF1B-204ENST00000536782 IGKV2-30P06310 120 aa9.19□□□□□ -0.94
TNFRSF1B-204ENST00000536782 CXCL6P80162 114 aa9.17□□□□□ -0.94
TNFRSF1B-204ENST00000536782 Q5W150 140 aa9.17□□□□□ -0.94
TNFRSF1B-204ENST00000536782 ACYP1P07311 99 aa9.16□□□□□ -0.94
TNFRSF1B-204ENST00000536782 C7orf65Q6ZTY9 151 aa9.16□□□□□ -0.94
TNFRSF1B-204ENST00000536782 FAM240AA0A1B0GVK7 77 aa9.08□□□□□ -0.96
TNFRSF1B-204ENST00000536782 C4orf26Q17RF5 130 aa9.05□□□□□ -0.96
TNFRSF1B-204ENST00000536782 TP53AIP1Q9HCN2 124 aa9.04□□□□□ -0.96
TNFRSF1B-204ENST00000536782 A0A1B0GV90 55 aa9.01□□□□□ -0.97
TNFRSF1B-204ENST00000536782 ATP5EP2Q5VTU8 51 aa9.01□□□□□ -0.97
TNFRSF1B-204ENST00000536782 NEBP20929 6669 aa9.01□□□□□ -0.97
TNFRSF1B-204ENST00000536782 FAM236AA0A1B0GUQ0 79 aa8.98□□□□□ -0.97
TNFRSF1B-204ENST00000536782 FAM236BA0A1B0GV22 79 aa8.98□□□□□ -0.97
TNFRSF1B-204ENST00000536782 C5orf47Q569G3 176 aa8.98□□□□□ -0.97
TNFRSF1B-204ENST00000536782 MUC12Q9UKN1 5478 aa8.93□□□□□ -0.98
TNFRSF1B-204ENST00000536782 A6NN06 94 aa8.92□□□□□ -0.98
TNFRSF1B-204ENST00000536782 J3QR89 54 aa8.92□□□□□ -0.98
TNFRSF1B-204ENST00000536782 S4R3F8 94 aa8.91□□□□□ -0.98
TNFRSF1B-204ENST00000536782 LINC00643Q86TS7 51 aa8.9□□□□□ -0.98
TNFRSF1B-204ENST00000536782 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
TNFRSF1B-204ENST00000536782 MT1BP07438 61 aa8.89□□□□□ -0.99
TNFRSF1B-204ENST00000536782 Q5VV11 94 aa8.89□□□□□ -0.99
TNFRSF1B-204ENST00000536782 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
TNFRSF1B-204ENST00000536782 HIST1H4AP62805 103 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1B-204ENST00000536782 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
TNFRSF1B-204ENST00000536782 SPRR2GQ9BYE4 73 aa8.85□□□□□ -0.99
TNFRSF1B-204ENST00000536782 TRAV22A0A0B4J277 110 aa8.84□□□□□ -0.99
TNFRSF1B-204ENST00000536782 LCA10Q71F78 164 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms