RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 MT1FP04733 61 aa6.59□□□□□ -1.35
AMBRA1-210ENST00000531542 RBM3P98179 157 aaKnown RBP6.59□□□□□ -1.35
AMBRA1-210ENST00000531542 PYY3Q5JQD4 70 aa6.59□□□□□ -1.35
AMBRA1-210ENST00000531542 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
AMBRA1-210ENST00000531542 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
AMBRA1-210ENST00000531542 MTURNQ8N3F0 131 aa6.57□□□□□ -1.36
AMBRA1-210ENST00000531542 DSCR8Q96T75 97 aa6.57□□□□□ -1.36
AMBRA1-210ENST00000531542 LCE2BO14633 110 aa6.56□□□□□ -1.36
AMBRA1-210ENST00000531542 ZCCHC13Q8WW36 166 aaKnown RBP6.56□□□□□ -1.36
AMBRA1-210ENST00000531542 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
AMBRA1-210ENST00000531542 UQCR10Q9UDW1 63 aa6.55□□□□□ -1.36
AMBRA1-210ENST00000531542 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
AMBRA1-210ENST00000531542 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
AMBRA1-210ENST00000531542 A0A1B0GW54 56 aa6.53□□□□□ -1.36
AMBRA1-210ENST00000531542 C9JAW5 83 aa6.53□□□□□ -1.36
AMBRA1-210ENST00000531542 Q6ZQT0 140 aa6.53□□□□□ -1.36
AMBRA1-210ENST00000531542 VPS25Q9BRG1 176 aa6.53□□□□□ -1.36
AMBRA1-210ENST00000531542 SCGB1C2P0DMR2 95 aa6.52□□□□□ -1.37
AMBRA1-210ENST00000531542 SPINK7P58062 85 aa6.52□□□□□ -1.37
AMBRA1-210ENST00000531542 BAALC-AS2P0C853 105 aa6.51□□□□□ -1.37
AMBRA1-210ENST00000531542 NDUFB1O75438 58 aa6.5□□□□□ -1.37
AMBRA1-210ENST00000531542 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
AMBRA1-210ENST00000531542 JMJD7-PLA2G4BH0Y9G9 81 aa6.47□□□□□ -1.37
AMBRA1-210ENST00000531542 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.38
AMBRA1-210ENST00000531542 A8MWP4 228 aa6.46□□□□□ -1.38
AMBRA1-210ENST00000531542 PDE6GP18545 87 aa6.46□□□□□ -1.38
AMBRA1-210ENST00000531542 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
AMBRA1-210ENST00000531542 IGKV3D-7A0A0C4DH55 119 aa6.42□□□□□ -1.38
AMBRA1-210ENST00000531542 ATXN8Q156A1 80 aa6.42□□□□□ -1.38
AMBRA1-210ENST00000531542 WFDC13Q8IUB5 93 aa6.41□□□□□ -1.38
AMBRA1-210ENST00000531542 LINC00846Q9NV44 126 aa6.41□□□□□ -1.38
AMBRA1-210ENST00000531542 Q6ZVQ6 151 aa6.4□□□□□ -1.38
AMBRA1-210ENST00000531542 PRR15Q8IV56 129 aa6.4□□□□□ -1.38
AMBRA1-210ENST00000531542 KRTAP19-6Q3LI70 58 aa6.39□□□□□ -1.39
AMBRA1-210ENST00000531542 MACF1Q9UPN3 7388 aaKnown RBP6.38□□□□□ -1.39
AMBRA1-210ENST00000531542 M0R143 59 aa6.38□□□□□ -1.39
AMBRA1-210ENST00000531542 LYRM7Q5U5X0 104 aa6.38□□□□□ -1.39
AMBRA1-210ENST00000531542 NREPQ16612 68 aa6.35□□□□□ -1.39
AMBRA1-210ENST00000531542 TMEM254Q8TBM7 123 aa6.35□□□□□ -1.39
AMBRA1-210ENST00000531542 MRPL34Q9BQ48 92 aaKnown RBP6.34□□□□□ -1.39
AMBRA1-210ENST00000531542 C14orf132Q9NPU4 83 aa6.34□□□□□ -1.39
AMBRA1-210ENST00000531542 MMP24-AS1A0A0U1RRL7 71 aa6.33□□□□□ -1.4
AMBRA1-210ENST00000531542 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
AMBRA1-210ENST00000531542 TMA7Q9Y2S6 64 aaKnown RBP6.32□□□□□ -1.4
AMBRA1-210ENST00000531542 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
AMBRA1-210ENST00000531542 NAA38Q9BRA0 125 aaKnown RBP6.31□□□□□ -1.4
AMBRA1-210ENST00000531542 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
AMBRA1-210ENST00000531542 K7EQZ3 153 aa6.26□□□□□ -1.41
AMBRA1-210ENST00000531542 H3BT86 120 aa6.23□□□□□ -1.41
AMBRA1-210ENST00000531542 NDUFS5O43920 106 aa6.23□□□□□ -1.41
AMBRA1-210ENST00000531542 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
AMBRA1-210ENST00000531542 SMIM6P0DI80 62 aa6.22□□□□□ -1.41
AMBRA1-210ENST00000531542 BPY2O14599 106 aa6.21□□□□□ -1.42
AMBRA1-210ENST00000531542 Q5W150 140 aa6.2□□□□□ -1.42
AMBRA1-210ENST00000531542 IGKV2D-30A0A075B6S6 120 aa6.19□□□□□ -1.42
AMBRA1-210ENST00000531542 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
AMBRA1-210ENST00000531542 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
AMBRA1-210ENST00000531542 C9orf118A6NHY6 69 aa6.17□□□□□ -1.42
AMBRA1-210ENST00000531542 TSTD3H0UI37 97 aa6.16□□□□□ -1.42
AMBRA1-210ENST00000531542 CASC2Q6XLA1 102 aa6.16□□□□□ -1.42
AMBRA1-210ENST00000531542 A0A1W2PPM0 123 aa6.15□□□□□ -1.42
AMBRA1-210ENST00000531542 CXCL6P80162 114 aa6.15□□□□□ -1.42
AMBRA1-210ENST00000531542 BATFQ16520 125 aa6.13□□□□□ -1.43
AMBRA1-210ENST00000531542 HCG22E2RYF7 251 aa6.12□□□□□ -1.43
AMBRA1-210ENST00000531542 TAX1BP3O14907 124 aa6.12□□□□□ -1.43
AMBRA1-210ENST00000531542 C4orf26Q17RF5 130 aa6.12□□□□□ -1.43
AMBRA1-210ENST00000531542 Q8N9L7 120 aa6.11□□□□□ -1.43
AMBRA1-210ENST00000531542 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
AMBRA1-210ENST00000531542 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
AMBRA1-210ENST00000531542 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
AMBRA1-210ENST00000531542 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
AMBRA1-210ENST00000531542 UBL5Q9BZL1 73 aa6.04□□□□□ -1.44
AMBRA1-210ENST00000531542 SMCPP49901 116 aaPredicted RBP6.03□□□□□ -1.44
AMBRA1-210ENST00000531542 SPCS1Q9Y6A9 102 aa6.03□□□□□ -1.44
AMBRA1-210ENST00000531542 MT1BP07438 61 aa6.02□□□□□ -1.45
AMBRA1-210ENST00000531542 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
AMBRA1-210ENST00000531542 S4R3F8 94 aa6.02□□□□□ -1.45
AMBRA1-210ENST00000531542 FAM236AA0A1B0GUQ0 79 aa6.01□□□□□ -1.45
AMBRA1-210ENST00000531542 FAM236BA0A1B0GV22 79 aa6.01□□□□□ -1.45
AMBRA1-210ENST00000531542 C1orf64Q8NEQ6 169 aa6.01□□□□□ -1.45
AMBRA1-210ENST00000531542 A6NN06 94 aa6□□□□□ -1.45
AMBRA1-210ENST00000531542 Q5VV11 94 aa6□□□□□ -1.45
AMBRA1-210ENST00000531542 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
AMBRA1-210ENST00000531542 NEBP20929 6669 aa5.98□□□□□ -1.45
AMBRA1-210ENST00000531542 LCA10Q71F78 164 aa5.98□□□□□ -1.45
AMBRA1-210ENST00000531542 LOC105371267A0A1B0GV96 52 aa5.97□□□□□ -1.45
AMBRA1-210ENST00000531542 PRO0461Q9UI25 63 aa5.97□□□□□ -1.45
AMBRA1-210ENST00000531542 KLKP1Q107X0 134 aa5.94□□□□□ -1.46
AMBRA1-210ENST00000531542 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
AMBRA1-210ENST00000531542 K7EP34 96 aa5.91□□□□□ -1.46
AMBRA1-210ENST00000531542 COL5A1-AS1Q5SY13 56 aa5.91□□□□□ -1.46
AMBRA1-210ENST00000531542 KRTAP3-3Q9BYR6 98 aa5.91□□□□□ -1.46
AMBRA1-210ENST00000531542 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
AMBRA1-210ENST00000531542 CYP4F30PQ9H0H9 118 aa5.88□□□□□ -1.47
AMBRA1-210ENST00000531542 MUC12Q9UKN1 5478 aa5.87□□□□□ -1.47
AMBRA1-210ENST00000531542 KRTAP5-9P26371 169 aa5.86□□□□□ -1.47
AMBRA1-210ENST00000531542 F8W1H4 67 aa5.84□□□□□ -1.47
AMBRA1-210ENST00000531542 LOC101927531A0A1B0GV80 90 aa5.82□□□□□ -1.48
AMBRA1-210ENST00000531542 TRAV22A0A0B4J277 110 aa5.81□□□□□ -1.48
AMBRA1-210ENST00000531542 GTF2H5Q6ZYL4 71 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms