RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 A8MWP4 228 aa5.58□□□□□ -1.52
NXF1-209ENST00000531474 PRR26Q8N8Z3 221 aa5.58□□□□□ -1.52
NXF1-209ENST00000531474 MYCBP2O75592 4640 aa5.57□□□□□ -1.52
NXF1-209ENST00000531474 HCG22E2RYF7 251 aa5.57□□□□□ -1.52
NXF1-209ENST00000531474 K7EQZ3 153 aa5.57□□□□□ -1.52
NXF1-209ENST00000531474 PRR15Q8IV56 129 aa5.57□□□□□ -1.52
NXF1-209ENST00000531474 NDUFC1O43677 76 aa5.56□□□□□ -1.52
NXF1-209ENST00000531474 A0A087X002 238 aa5.55□□□□□ -1.52
NXF1-209ENST00000531474 MT1HL1P0DM35 61 aa5.55□□□□□ -1.52
NXF1-209ENST00000531474 KLKP1Q107X0 134 aa5.55□□□□□ -1.52
NXF1-209ENST00000531474 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
NXF1-209ENST00000531474 OCR1Q9BZK8 76 aa5.55□□□□□ -1.52
NXF1-209ENST00000531474 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
NXF1-209ENST00000531474 KRTAP10-8P60410 259 aa5.54□□□□□ -1.52
NXF1-209ENST00000531474 TMEM258P61165 79 aa5.54□□□□□ -1.52
NXF1-209ENST00000531474 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
NXF1-209ENST00000531474 ASB16-AS1Q495Z4 193 aa5.54□□□□□ -1.52
NXF1-209ENST00000531474 C20orf197Q8N268 126 aa5.54□□□□□ -1.52
NXF1-209ENST00000531474 LRP1Q07954 4544 aaKnown RBP5.53□□□□□ -1.52
NXF1-209ENST00000531474 C5orf47Q569G3 176 aa5.53□□□□□ -1.52
NXF1-209ENST00000531474 KRTAP13-2Q52LG2 175 aa5.52□□□□□ -1.53
NXF1-209ENST00000531474 HRCT1Q6UXD1 115 aa5.52□□□□□ -1.53
NXF1-209ENST00000531474 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
NXF1-209ENST00000531474 Q5XG85 94 aa5.51□□□□□ -1.53
NXF1-209ENST00000531474 CASC2Q6XLA1 102 aa5.51□□□□□ -1.53
NXF1-209ENST00000531474 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
NXF1-209ENST00000531474 Q96NJ1 140 aa5.5□□□□□ -1.53
NXF1-209ENST00000531474 H3BPC8 53 aa5.49□□□□□ -1.53
NXF1-209ENST00000531474 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
NXF1-209ENST00000531474 hDV103S1A0JD37 113 aa5.48□□□□□ -1.53
NXF1-209ENST00000531474 LORP23490 312 aaPredicted RBP5.48□□□□□ -1.53
NXF1-209ENST00000531474 LIMD2Q9BT23 127 aa5.48□□□□□ -1.53
NXF1-209ENST00000531474 TP53AIP1Q9HCN2 124 aa5.48□□□□□ -1.53
NXF1-209ENST00000531474 DMBT1Q9UGM3 2413 aaPredicted RBP5.47□□□□□ -1.53
NXF1-209ENST00000531474 MP68P56378 58 aa5.47□□□□□ -1.53
NXF1-209ENST00000531474 ATP5EP56381 51 aaPredicted RBP5.47□□□□□ -1.53
NXF1-209ENST00000531474 RPS28P62857 69 aaKnown RBP5.47□□□□□ -1.53
NXF1-209ENST00000531474 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
NXF1-209ENST00000531474 A0A0U1RQV1 116 aa5.46□□□□□ -1.54
NXF1-209ENST00000531474 LINC00304Q8N9R0 145 aa5.46□□□□□ -1.54
NXF1-209ENST00000531474 C8orf17Q9NRJ1 99 aa5.46□□□□□ -1.54
NXF1-209ENST00000531474 MMP24-AS1A0A0U1RRL7 71 aa5.45□□□□□ -1.54
NXF1-209ENST00000531474 C8orf87E5RJ46 101 aa5.45□□□□□ -1.54
NXF1-209ENST00000531474 H7BZZ5 65 aa5.45□□□□□ -1.54
NXF1-209ENST00000531474 SPINK1P00995 79 aa5.45□□□□□ -1.54
NXF1-209ENST00000531474 SPAG11AQ6PDA7 123 aa5.45□□□□□ -1.54
NXF1-209ENST00000531474 SNURFQ9Y675 71 aa5.45□□□□□ -1.54
NXF1-209ENST00000531474 IGHV6-1A0A0B4J1U7 121 aa5.43□□□□□ -1.54
NXF1-209ENST00000531474 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
NXF1-209ENST00000531474 TNXBP22105 4242 aa5.43□□□□□ -1.54
NXF1-209ENST00000531474 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
NXF1-209ENST00000531474 FAM236DA0A1B0GTK5 79 aa5.41□□□□□ -1.54
NXF1-209ENST00000531474 FAM236CP0DP71 79 aa5.41□□□□□ -1.54
NXF1-209ENST00000531474 MRPL34Q9BQ48 92 aaKnown RBP5.41□□□□□ -1.54
NXF1-209ENST00000531474 HERC1Q15751 4861 aa5.39□□□□□ -1.55
NXF1-209ENST00000531474 TRAV22A0A0B4J277 110 aa5.39□□□□□ -1.55
NXF1-209ENST00000531474 H0Y9P7 68 aa5.39□□□□□ -1.55
NXF1-209ENST00000531474 LINC00313P59037 77 aa5.39□□□□□ -1.55
NXF1-209ENST00000531474 C1orf195Q5TG92 126 aa5.39□□□□□ -1.55
NXF1-209ENST00000531474 ZCCHC13Q8WW36 166 aaKnown RBP5.39□□□□□ -1.55
NXF1-209ENST00000531474 LINC00208Q96KT6 92 aa5.37□□□□□ -1.55
NXF1-209ENST00000531474 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
NXF1-209ENST00000531474 NDUFS5O43920 106 aa5.36□□□□□ -1.55
NXF1-209ENST00000531474 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
NXF1-209ENST00000531474 RETNLBQ9BQ08 111 aa5.35□□□□□ -1.55
NXF1-209ENST00000531474 PRR4Q16378 134 aa5.34□□□□□ -1.55
NXF1-209ENST00000531474 SPANXA2-OT1Q8N9U9 137 aa5.33□□□□□ -1.56
NXF1-209ENST00000531474 NOTCH2NLQ7Z3S9 236 aa5.31□□□□□ -1.56
NXF1-209ENST00000531474 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
NXF1-209ENST00000531474 HMCN2Q8NDA2 5059 aa5.3□□□□□ -1.56
NXF1-209ENST00000531474 LOC101927531A0A1B0GV80 90 aa5.3□□□□□ -1.56
NXF1-209ENST00000531474 CYP4F30PQ9H0H9 118 aa5.3□□□□□ -1.56
NXF1-209ENST00000531474 IGLV7-46A0A075B6I9 117 aa5.28□□□□□ -1.56
NXF1-209ENST00000531474 FP248Q71RG6 208 aaPredicted RBP5.27□□□□□ -1.57
NXF1-209ENST00000531474 SMIM26A0A096LP01 95 aa5.26□□□□□ -1.57
NXF1-209ENST00000531474 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
NXF1-209ENST00000531474 KRTAP16-1A8MUX0 517 aa5.23□□□□□ -1.57
NXF1-209ENST00000531474 KRTAP13-3Q3SY46 172 aa5.23□□□□□ -1.57
NXF1-209ENST00000531474 TPRXLQ17RH7 258 aa5.21□□□□□ -1.58
NXF1-209ENST00000531474 Q5W150 140 aa5.21□□□□□ -1.58
NXF1-209ENST00000531474 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
NXF1-209ENST00000531474 A0A0A0MQY5 61 aa5.2□□□□□ -1.58
NXF1-209ENST00000531474 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
NXF1-209ENST00000531474 PCOTHQ58A44 107 aa5.19□□□□□ -1.58
NXF1-209ENST00000531474 C9orf92A6NGG3 77 aa5.17□□□□□ -1.58
NXF1-209ENST00000531474 IGKV2-30P06310 120 aa5.17□□□□□ -1.58
NXF1-209ENST00000531474 V9GYY9 64 aa5.17□□□□□ -1.58
NXF1-209ENST00000531474 C20orf166-AS1Q96NR2 134 aa5.16□□□□□ -1.58
NXF1-209ENST00000531474 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
NXF1-209ENST00000531474 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.59
NXF1-209ENST00000531474 A8MUU9 505 aa5.15□□□□□ -1.59
NXF1-209ENST00000531474 ACYP2P14621 99 aa5.15□□□□□ -1.59
NXF1-209ENST00000531474 LRP2P98164 4655 aa5.14□□□□□ -1.59
NXF1-209ENST00000531474 LPAP08519 4548 aa5.13□□□□□ -1.59
NXF1-209ENST00000531474 Q1T7F1 81 aa5.12□□□□□ -1.59
NXF1-209ENST00000531474 XP32Q5T750 250 aa5.12□□□□□ -1.59
NXF1-209ENST00000531474 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
NXF1-209ENST00000531474 HRES1P13985 223 aa5.11□□□□□ -1.59
NXF1-209ENST00000531474 C7orf65Q6ZTY9 151 aa5.11□□□□□ -1.59
NXF1-209ENST00000531474 Q75L30 129 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms