RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 IGLV9-49A0A0B4J1Y8 123 aa6.29□□□□□ -1.4
CAPN1-221ENST00000531068 TPRXLQ17RH7 258 aa6.29□□□□□ -1.4
CAPN1-221ENST00000531068 FP248Q71RG6 208 aaPredicted RBP6.29□□□□□ -1.4
CAPN1-221ENST00000531068 BPY2O14599 106 aa6.28□□□□□ -1.4
CAPN1-221ENST00000531068 MOBPQ13875 183 aa6.28□□□□□ -1.4
CAPN1-221ENST00000531068 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
CAPN1-221ENST00000531068 IGKV4-1P06312 121 aa6.25□□□□□ -1.41
CAPN1-221ENST00000531068 TMEM258P61165 79 aa6.25□□□□□ -1.41
CAPN1-221ENST00000531068 RPS28P62857 69 aaKnown RBP6.25□□□□□ -1.41
CAPN1-221ENST00000531068 A0A0U1RQV1 116 aa6.24□□□□□ -1.41
CAPN1-221ENST00000531068 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
CAPN1-221ENST00000531068 NDUFC1O43677 76 aa6.23□□□□□ -1.41
CAPN1-221ENST00000531068 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
CAPN1-221ENST00000531068 SS18L2Q9UHA2 77 aa6.23□□□□□ -1.41
CAPN1-221ENST00000531068 A0A0G2JQZ4 141 aa6.19□□□□□ -1.42
CAPN1-221ENST00000531068 DSCR10P59022 87 aa6.19□□□□□ -1.42
CAPN1-221ENST00000531068 OCR1Q9BZK8 76 aa6.19□□□□□ -1.42
CAPN1-221ENST00000531068 J3KT08 172 aa6.17□□□□□ -1.42
CAPN1-221ENST00000531068 KRTAP13-3Q3SY46 172 aa6.17□□□□□ -1.42
CAPN1-221ENST00000531068 MUC2Q02817 5179 aa6.16□□□□□ -1.42
CAPN1-221ENST00000531068 C20orf197Q8N268 126 aa6.16□□□□□ -1.42
CAPN1-221ENST00000531068 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
CAPN1-221ENST00000531068 A0A087WSZ3 146 aa6.14□□□□□ -1.43
CAPN1-221ENST00000531068 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
CAPN1-221ENST00000531068 CD164Q04900 197 aa6.14□□□□□ -1.43
CAPN1-221ENST00000531068 LINC00472Q9H8W2 130 aa6.14□□□□□ -1.43
CAPN1-221ENST00000531068 H7BZZ5 65 aa6.13□□□□□ -1.43
CAPN1-221ENST00000531068 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
CAPN1-221ENST00000531068 HRCT1Q6UXD1 115 aa6.13□□□□□ -1.43
CAPN1-221ENST00000531068 Q8N9L7 120 aa6.13□□□□□ -1.43
CAPN1-221ENST00000531068 CYSTM1Q9H1C7 97 aa6.13□□□□□ -1.43
CAPN1-221ENST00000531068 HCG22E2RYF7 251 aa6.12□□□□□ -1.43
CAPN1-221ENST00000531068 TMEM254Q8TBM7 123 aa6.12□□□□□ -1.43
CAPN1-221ENST00000531068 A8MWP4 228 aa6.11□□□□□ -1.43
CAPN1-221ENST00000531068 ASB16-AS1Q495Z4 193 aa6.11□□□□□ -1.43
CAPN1-221ENST00000531068 C5orf47Q569G3 176 aa6.11□□□□□ -1.43
CAPN1-221ENST00000531068 PRR15Q8IV56 129 aa6.11□□□□□ -1.43
CAPN1-221ENST00000531068 K7EQZ3 153 aa6.1□□□□□ -1.43
CAPN1-221ENST00000531068 FAM236DA0A1B0GTK5 79 aa6.08□□□□□ -1.44
CAPN1-221ENST00000531068 FAM236CP0DP71 79 aa6.08□□□□□ -1.44
CAPN1-221ENST00000531068 XP32Q5T750 250 aa6.08□□□□□ -1.44
CAPN1-221ENST00000531068 Q5XG85 94 aa6.08□□□□□ -1.44
CAPN1-221ENST00000531068 H3BPC8 53 aa6.07□□□□□ -1.44
CAPN1-221ENST00000531068 NDUFB1O75438 58 aa6.06□□□□□ -1.44
CAPN1-221ENST00000531068 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
CAPN1-221ENST00000531068 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
CAPN1-221ENST00000531068 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
CAPN1-221ENST00000531068 Q96NJ1 140 aa6.04□□□□□ -1.44
CAPN1-221ENST00000531068 SNURFQ9Y675 71 aa6.04□□□□□ -1.44
CAPN1-221ENST00000531068 C1orf195Q5TG92 126 aa6.02□□□□□ -1.45
CAPN1-221ENST00000531068 CASC2Q6XLA1 102 aa6.02□□□□□ -1.45
CAPN1-221ENST00000531068 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
CAPN1-221ENST00000531068 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
CAPN1-221ENST00000531068 C9orf92A6NGG3 77 aa6□□□□□ -1.45
CAPN1-221ENST00000531068 MP68P56378 58 aa6□□□□□ -1.45
CAPN1-221ENST00000531068 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
CAPN1-221ENST00000531068 DEFB116Q30KQ4 102 aa5.99□□□□□ -1.45
CAPN1-221ENST00000531068 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
CAPN1-221ENST00000531068 hDV103S1A0JD37 113 aa5.97□□□□□ -1.45
CAPN1-221ENST00000531068 KRTAP4-1Q9BYQ7 146 aa5.97□□□□□ -1.45
CAPN1-221ENST00000531068 A0A1B0GVX0 72 aa5.96□□□□□ -1.46
CAPN1-221ENST00000531068 PCOTHQ58A44 107 aa5.96□□□□□ -1.46
CAPN1-221ENST00000531068 WFDC13Q8IUB5 93 aa5.96□□□□□ -1.46
CAPN1-221ENST00000531068 SMIM26A0A096LP01 95 aa5.95□□□□□ -1.46
CAPN1-221ENST00000531068 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
CAPN1-221ENST00000531068 CYP4F30PQ9H0H9 118 aa5.95□□□□□ -1.46
CAPN1-221ENST00000531068 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
CAPN1-221ENST00000531068 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
CAPN1-221ENST00000531068 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
CAPN1-221ENST00000531068 H0Y9P7 68 aa5.91□□□□□ -1.46
CAPN1-221ENST00000531068 RPL37P61927 97 aaKnown RBP5.9□□□□□ -1.46
CAPN1-221ENST00000531068 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.46
CAPN1-221ENST00000531068 LINC00208Q96KT6 92 aa5.89□□□□□ -1.47
CAPN1-221ENST00000531068 C1orf64Q8NEQ6 169 aa5.87□□□□□ -1.47
CAPN1-221ENST00000531068 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
CAPN1-221ENST00000531068 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
CAPN1-221ENST00000531068 NOTCH2NLQ7Z3S9 236 aa5.86□□□□□ -1.47
CAPN1-221ENST00000531068 ATP11AUNQ6ZP68 121 aa5.85□□□□□ -1.47
CAPN1-221ENST00000531068 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
CAPN1-221ENST00000531068 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
CAPN1-221ENST00000531068 Q75L30 129 aa5.83□□□□□ -1.48
CAPN1-221ENST00000531068 KRTAP16-1A8MUX0 517 aa5.82□□□□□ -1.48
CAPN1-221ENST00000531068 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
CAPN1-221ENST00000531068 KRTAP19-2Q3LHN2 52 aa5.81□□□□□ -1.48
CAPN1-221ENST00000531068 Q8N9P0 234 aaPredicted RBP5.81□□□□□ -1.48
CAPN1-221ENST00000531068 LINC00313P59037 77 aa5.79□□□□□ -1.48
CAPN1-221ENST00000531068 COX6B2Q6YFQ2 88 aa5.79□□□□□ -1.48
CAPN1-221ENST00000531068 Q1T7F1 81 aa5.78□□□□□ -1.48
CAPN1-221ENST00000531068 V9GYY9 64 aa5.78□□□□□ -1.48
CAPN1-221ENST00000531068 NDUFS5O43920 106 aa5.77□□□□□ -1.49
CAPN1-221ENST00000531068 MT1HP80294 61 aa5.77□□□□□ -1.49
CAPN1-221ENST00000531068 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
CAPN1-221ENST00000531068 C20orf166-AS1Q96NR2 134 aa5.76□□□□□ -1.49
CAPN1-221ENST00000531068 A8MUU9 505 aa5.75□□□□□ -1.49
CAPN1-221ENST00000531068 M0R2T5 61 aa5.73□□□□□ -1.49
CAPN1-221ENST00000531068 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
CAPN1-221ENST00000531068 Q5W150 140 aa5.7□□□□□ -1.5
CAPN1-221ENST00000531068 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
CAPN1-221ENST00000531068 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
CAPN1-221ENST00000531068 COA5Q86WW8 74 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms